CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = S592del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12592S592delS4984deldelAGC---4747115214-15216

Details of the mutation S592del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12592S592delAGC---4747All0.000009
ORF1ab/nsp12592S592delAGC---2525B.1.1.70.000022
ORF1ab/nsp12592S592delAGC---44B.1.1770.000053
ORF1ab/nsp12592S592delAGC---33AY.40.000005
ORF1ab/nsp12592S592delAGC---22AY.4.50.000215
ORF1ab/nsp12592S592delAGC---11AD.20.000219
ORF1ab/nsp12592S592delAGC---11AY.430.000004
ORF1ab/nsp12592S592delAGC---11AY.520.000814
ORF1ab/nsp12592S592delAGC---11AY.99.10.001553
ORF1ab/nsp12592S592delAGC---11B.1.1.700.000341
ORF1ab/nsp12592S592delAGC---11B.1.1600.000031
ORF1ab/nsp12592S592delAGC---11B.1.160.230.004831
ORF1ab/nsp12592S592delAGC---11B.1.177.160.000664
ORF1ab/nsp12592S592delAGC---11B.1.177.540.000606
ORF1ab/nsp12592S592delAGC---11B.1.177.600.000218
ORF1ab/nsp12592S592delAGC---11B.1.177.810.000189
ORF1ab/nsp12592S592delAGC---11B.1.258.100.011364
ORF1ab/nsp12592S592delAGC---11U.30.003861