CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = S434S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12434S434SS4826SsyntcTtcC367536470.99238114740-14742
ORF1ab/nsp12434S434SS4826SsyntcTtcA3675170.0046258514740-14742
ORF1ab/nsp12434S434SS4826SsyntcTtcG3675110.002993214740-14742

Details of the mutation S434S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12434S434StcTtcC36473675All0.000698
ORF1ab/nsp12434S434StcTtcA173675All0.000003
ORF1ab/nsp12434S434StcTtcG113675All0.000002
ORF1ab/nsp12434S434StcTtcC33283328AY.40.00518
ORF1ab/nsp12434S434StcTtcC163166B.1.1.70.000146
ORF1ab/nsp12434S434StcTtcG3166B.1.1.70.000003
ORF1ab/nsp12434S434StcTtcC4848B.1.617.20.000181
ORF1ab/nsp12434S434StcTtcC3131AY.910.022644
ORF1ab/nsp12434S434StcTtcC1818AY.430.00008
ORF1ab/nsp12434S434StcTtcA99B.1.930.008403
ORF1ab/nsp12434S434StcTtcC66AY.1200.000223
ORF1ab/nsp12434S434StcTtcC66AY.39.10.000238
ORF1ab/nsp12434S434StcTtcA66P.10.000095
ORF1ab/nsp12434S434StcTtcG55B.1.2400.001078
ORF1ab/nsp12434S434StcTtcC34AY.1030.000019
ORF1ab/nsp12434S434StcTtcA14AY.1030.000006
ORF1ab/nsp12434S434StcTtcC44AY.420.000161
ORF1ab/nsp12434S434StcTtcC44B.1.20.000035
ORF1ab/nsp12434S434StcTtcC23AY.30.00002
ORF1ab/nsp12434S434StcTtcA13AY.30.00001
ORF1ab/nsp12434S434StcTtcC33AY.390.000074
ORF1ab/nsp12434S434StcTtcC33AY.4.2.10.000447
ORF1ab/nsp12434S434StcTtcC33AY.440.000018
ORF1ab/nsp12434S434StcTtcC22AY.1190.000071
ORF1ab/nsp12434S434StcTtcC22AY.290.000032
ORF1ab/nsp12434S434StcTtcC22AY.450.000243
ORF1ab/nsp12434S434StcTtcC22AY.46.60.000144
ORF1ab/nsp12434S434StcTtcC11A.2.40.003367
ORF1ab/nsp12434S434StcTtcC11AY.1040.001984
ORF1ab/nsp12434S434StcTtcC11AY.1180.000063
ORF1ab/nsp12434S434StcTtcC11AY.130.000161
ORF1ab/nsp12434S434StcTtcC11AY.250.000006
ORF1ab/nsp12434S434StcTtcC11AY.340.000097
ORF1ab/nsp12434S434StcTtcC11AY.4.20.000022
ORF1ab/nsp12434S434StcTtcC11AY.50.000021
ORF1ab/nsp12434S434StcTtcC11AY.5.40.000277
ORF1ab/nsp12434S434StcTtcC11AY.680.000274
ORF1ab/nsp12434S434StcTtcC11AY.9.10.000084
ORF1ab/nsp12434S434StcTtcC11AZ.30.00152
ORF1ab/nsp12434S434StcTtcG11B0.000128
ORF1ab/nsp12434S434StcTtcC11B.1.1.3060.000438
ORF1ab/nsp12434S434StcTtcC11B.1.1.3160.000925
ORF1ab/nsp12434S434StcTtcC11B.1.1660.008475
ORF1ab/nsp12434S434StcTtcC11B.1.2410.000812
ORF1ab/nsp12434S434StcTtcG11B.1.3510.00003
ORF1ab/nsp12434S434StcTtcG11B.1.438.10.000107
ORF1ab/nsp12434S434StcTtcC11B.1.4680.005714