CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = S434F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12434S434FS4826FnonsyntCttTt130513040.99923414740-14742
ORF1ab/nsp12434S434FS4826FnonsyntCTtTC130510.00076628414740-14742

Details of the mutation S434F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12434S434FtCttTt13041305All0.000249
ORF1ab/nsp12434S434FtCTtTC11305All0
ORF1ab/nsp12434S434FtCttTt399399B.1.1.70.000357
ORF1ab/nsp12434S434FtCttTt340340B.1.1420.985507
ORF1ab/nsp12434S434FtCttTt7474B.1.1770.000974
ORF1ab/nsp12434S434FtCttTt5151B.1.617.20.000192
ORF1ab/nsp12434S434FtCttTt4545AY.40.00007
ORF1ab/nsp12434S434FtCttTt3737AZ.20.030378
ORF1ab/nsp12434S434FtCttTt3333AY.90.002231
ORF1ab/nsp12434S434FtCttTt3030AZ.10.026019
ORF1ab/nsp12434S434FtCttTt2929B.1.20.000255
ORF1ab/nsp12434S434FtCttTt2020B.10.000183
ORF1ab/nsp12434S434FtCttTt2020B.1.1.2770.015175
ORF1ab/nsp12434S434FtCttTt2020B.1.6210.00177
ORF1ab/nsp12434S434FtCttTt1818B.1.6280.006342
ORF1ab/nsp12434S434FtCttTt1616AY.250.000096
ORF1ab/nsp12434S434FtCttTt1414AY.1020.000371
ORF1ab/nsp12434S434FtCttTt1111B.1.4290.000259
ORF1ab/nsp12434S434FtCttTt99AY.440.000055
ORF1ab/nsp12434S434FtCttTt99B.1.10.000163
ORF1ab/nsp12434S434FtCttTt99B.1.5260.000212
ORF1ab/nsp12434S434FtCttTt77AY.430.000031
ORF1ab/nsp12434S434FtCttTt66AY.390.000148
ORF1ab/nsp12434S434FtCttTt55AY.30.00005
ORF1ab/nsp12434S434FtCttTt55AY.450.000608
ORF1ab/nsp12434S434FtCttTt55C.160.005302
ORF1ab/nsp12434S434FtCttTt44AY.50.000083
ORF1ab/nsp12434S434FtCttTt44B.1.4590.016327
ORF1ab/nsp12434S434FtCttTt33AY.1180.000188
ORF1ab/nsp12434S434FtCttTt33AY.4.20.000065
ORF1ab/nsp12434S434FtCttTt33B.1.1.2220.000612
ORF1ab/nsp12434S434FtCttTt33P.10.000047
ORF1ab/nsp12434S434FtCttTt22AY.1030.000012
ORF1ab/nsp12434S434FtCttTt22AY.330.000134
ORF1ab/nsp12434S434FtCttTt22AY.340.000194
ORF1ab/nsp12434S434FtCttTt22AY.39.10.000079
ORF1ab/nsp12434S434FtCttTt22AY.420.00008
ORF1ab/nsp12434S434FtCttTt22AY.630.000774
ORF1ab/nsp12434S434FtCttTt22AY.670.000929
ORF1ab/nsp12434S434FtCttTt22B.1.1.4640.002946
ORF1ab/nsp12434S434FtCttTt22B.1.1.5190.000079
ORF1ab/nsp12434S434FtCttTt22B.1.177.40.000422
ORF1ab/nsp12434S434FtCttTt22B.1.177.730.001133
ORF1ab/nsp12434S434FtCttTt22B.1.2430.000139
ORF1ab/nsp12434S434FtCttTt22B.1.4270.000101
ORF1ab/nsp12434S434FtCttTt22B.1.5960.000174
ORF1ab/nsp12434S434FtCttTt110.055556
ORF1ab/nsp12434S434FtCttTt11AY.1170.000085
ORF1ab/nsp12434S434FtCttTt11AY.1190.000035
ORF1ab/nsp12434S434FtCttTt11AY.1210.000135
ORF1ab/nsp12434S434FtCttTt11AY.130.000161
ORF1ab/nsp12434S434FtCttTt11AY.200.000039
ORF1ab/nsp12434S434FtCttTt11AY.230.00007
ORF1ab/nsp12434S434FtCttTt11AY.260.000028
ORF1ab/nsp12434S434FtCttTt11AY.290.000016
ORF1ab/nsp12434S434FtCttTt11AY.3.10.000085
ORF1ab/nsp12434S434FtCttTt11AY.320.000532
ORF1ab/nsp12434S434FtCttTt11AY.460.000104
ORF1ab/nsp12434S434FtCttTt11AY.470.000031
ORF1ab/nsp12434S434FtCttTt11AY.580.000907
ORF1ab/nsp12434S434FtCttTt11AY.610.000105
ORF1ab/nsp12434S434FtCttTt11AY.640.000595
ORF1ab/nsp12434S434FtCttTt11AY.750.000056
ORF1ab/nsp12434S434FtCttTt11AY.820.001357
ORF1ab/nsp12434S434FtCttTt11AY.9.10.000084
ORF1ab/nsp12434S434FtCttTt11B.1.1.1130.006993
ORF1ab/nsp12434S434FtCttTt11B.1.1.1890.001513
ORF1ab/nsp12434S434FtCttTt11B.1.1.2790.001121
ORF1ab/nsp12434S434FtCttTt11B.1.1.2860.002899
ORF1ab/nsp12434S434FtCttTt11B.1.1.3180.000302
ORF1ab/nsp12434S434FtCttTt11B.1.1.330.000421
ORF1ab/nsp12434S434FtCttTt11B.1.1.3690.000446
ORF1ab/nsp12434S434FtCttTt11B.1.1.700.000341
ORF1ab/nsp12434S434FtCttTt11B.1.1600.000031
ORF1ab/nsp12434S434FtCttTt11B.1.220.001318
ORF1ab/nsp12434S434FtCttTt11B.1.2210.000071
ORF1ab/nsp12434S434FtCttTt11B.1.3510.00003
ORF1ab/nsp12434S434FtCttTt11B.1.351.20.000303
ORF1ab/nsp12434S434FtCttTt11B.1.360.000146
ORF1ab/nsp12434S434FtCTtTC11B.1.3770.004566
ORF1ab/nsp12434S434FtCttTt11B.1.3830.009009
ORF1ab/nsp12434S434FtCttTt11B.1.4000.000429
ORF1ab/nsp12434S434FtCttTt11B.1.5570.05
ORF1ab/nsp12434S434FtCttTt11B.1.5770.000687
ORF1ab/nsp12434S434FtCttTt11B.1.5880.00091
ORF1ab/nsp12434S434FtCttTt11B.1.617.10.000129
ORF1ab/nsp12434S434FtCttTt11K.10.02381
ORF1ab/nsp12434S434FtCttTt11N.90.005952
ORF1ab/nsp12434S434FtCttTt11P.1.140.000048
ORF1ab/nsp12434S434FtCttTt11P.20.000187
ORF1ab/nsp12434S434FtCttTt11Q.80.000165