CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = S115A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12115S115AS4507AnonsynTcaGca1171150.98290613783-13785
ORF1ab/nsp12115S115AS4507AnonsynTcAGcT11720.01709413783-13785

Details of the mutation S115A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12115S115ATcaGca115117All0.000022
ORF1ab/nsp12115S115ATcAGcT2117All0
ORF1ab/nsp12115S115ATcaGca5252AY.50.001074
ORF1ab/nsp12115S115ATcaGca2525B.1.1.70.000022
ORF1ab/nsp12115S115ATcaGca1616AE.40.695652
ORF1ab/nsp12115S115ATcaGca44B.1.6370.000292
ORF1ab/nsp12115S115ATcaGca33B.1.1.5190.000119
ORF1ab/nsp12115S115ATcaGca33P.1.10.000953
ORF1ab/nsp12115S115ATcAGcT220.111111
ORF1ab/nsp12115S115ATcaGca22AY.300.000791
ORF1ab/nsp12115S115ATcaGca22AY.440.000012
ORF1ab/nsp12115S115ATcaGca11A0.000387
ORF1ab/nsp12115S115ATcaGca11AY.40.000002
ORF1ab/nsp12115S115ATcaGca11AY.5.30.000337
ORF1ab/nsp12115S115ATcaGca11B.1.10.000018
ORF1ab/nsp12115S115ATcaGca11B.1.4620.007246
ORF1ab/nsp12115S115ATcaGca11B.1.617.20.000004
ORF1ab/nsp12115S115ATcaGca11C.350.000774
ORF1ab/nsp12115S115ATcaGca11P.10.000016