CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = R640del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12640R640del2R5032del2delCGc--c430.7515358-15360
ORF1ab/nsp12640R640del2R5032del2delcGCc--410.2515358-15360

Details of the mutation R640del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12640R640del2CGc--c34All0.000001
ORF1ab/nsp12640R640del2cGCc--14All0
ORF1ab/nsp12640R640del2CGc--c12B.1.1.70.000001
ORF1ab/nsp12640R640del2cGCc--12B.1.1.70.000001
ORF1ab/nsp12640R640del2CGc--c11AY.30.00001
ORF1ab/nsp12640R640del2CGc--c11B.1.5260.000024