CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = R285L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12285R285LR4677LnonsyncGtcTt104890.85576914293-14295
ORF1ab/nsp12285R285LR4677LnonsyncGTcTG104140.13461514293-14295
ORF1ab/nsp12285R285LR4677LnonsynCGTTTA10410.0096153814293-14295

Details of the mutation R285L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12285R285LcGtcTt89104All0.000017
ORF1ab/nsp12285R285LcGTcTG14104All0.000003
ORF1ab/nsp12285R285LCGTTTA1104All0
ORF1ab/nsp12285R285LcGtcTt3636B.1.1.70.000032
ORF1ab/nsp12285R285LcGtcTt1616B.1.20.000141
ORF1ab/nsp12285R285LcGtcTt47B.1.617.20.000015
ORF1ab/nsp12285R285LcGTcTG37B.1.617.20.000011
ORF1ab/nsp12285R285LcGtcTt55AY.40.000008
ORF1ab/nsp12285R285LcGTcTG35AY.430.000013
ORF1ab/nsp12285R285LcGtcTt25AY.430.000009
ORF1ab/nsp12285R285LcGtcTt34B.10.000027
ORF1ab/nsp12285R285LcGTcTG14B.10.000009
ORF1ab/nsp12285R285LcGtcTt44B.1.5960.000349
ORF1ab/nsp12285R285LcGtcTt22AY.1030.000012
ORF1ab/nsp12285R285LcGtcTt12AY.1130.000142
ORF1ab/nsp12285R285LcGTcTG12AY.1130.000142
ORF1ab/nsp12285R285LcGtcTt22AY.200.000078
ORF1ab/nsp12285R285LcGtcTt12AY.9.20.000037
ORF1ab/nsp12285R285LcGTcTG12AY.9.20.000037
ORF1ab/nsp12285R285LcGtcTt11AY.290.000016
ORF1ab/nsp12285R285LcGTcTG11AY.30.00001
ORF1ab/nsp12285R285LcGtcTt11AY.330.000067
ORF1ab/nsp12285R285LCGTTTA11AY.440.000006
ORF1ab/nsp12285R285LcGtcTt11AY.46.60.000072
ORF1ab/nsp12285R285LcGTcTG11AY.670.000464
ORF1ab/nsp12285R285LcGtcTt11AY.710.000475
ORF1ab/nsp12285R285LcGTcTG11AY.840.000437
ORF1ab/nsp12285R285LcGTcTG11AY.990.001049
ORF1ab/nsp12285R285LcGTcTG11B.1.10.000018
ORF1ab/nsp12285R285LcGtcTt11B.1.1.4020.011111
ORF1ab/nsp12285R285LcGtcTt11B.1.1.5190.00004
ORF1ab/nsp12285R285LcGtcTt11B.1.3110.000275
ORF1ab/nsp12285R285LcGtcTt11B.1.5250.000113
ORF1ab/nsp12285R285LcGtcTt11B.1.5260.000024
ORF1ab/nsp12285R285LcGtcTt11B.1.5770.000687
ORF1ab/nsp12285R285LcGtcTt11C.40.01
ORF1ab/nsp12285R285LcGtcTt11D.20.000075
ORF1ab/nsp12285R285LcGtcTt11N.40.004255