CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = R285C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12285R285CR4677CnonsynCgtTgt3923910.99744914293-14295
ORF1ab/nsp12285R285CR4677CnonsynCgTTgC39210.0025510214293-14295

Details of the mutation R285C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12285R285CCgtTgt391392All0.000075
ORF1ab/nsp12285R285CCgTTgC1392All0
ORF1ab/nsp12285R285CCgtTgt7171B.1.1.70.000064
ORF1ab/nsp12285R285CCgtTgt5050B.1.1.5190.001986
ORF1ab/nsp12285R285CCgtTgt3737AY.40.000058
ORF1ab/nsp12285R285CCgtTgt2525B.1.4290.000588
ORF1ab/nsp12285R285CCgtTgt2222B.1.617.20.000083
ORF1ab/nsp12285R285CCgtTgt2020B.1.20.000176
ORF1ab/nsp12285R285CCgtTgt2020P.10.000315
ORF1ab/nsp12285R285CCgtTgt1010B.1.6370.000731
ORF1ab/nsp12285R285CCgtTgt88AY.440.000049
ORF1ab/nsp12285R285CCgtTgt77AY.250.000042
ORF1ab/nsp12285R285CCgtTgt66AY.1180.000376
ORF1ab/nsp12285R285CCgtTgt66B.1.1.1700.007481
ORF1ab/nsp12285R285CCgtTgt55AY.200.000194
ORF1ab/nsp12285R285CCgtTgt55B.1.177.820.002387
ORF1ab/nsp12285R285CCgtTgt55B.1.2650.006353
ORF1ab/nsp12285R285CCgtTgt55B.1.5260.000118
ORF1ab/nsp12285R285CCgtTgt44AY.430.000018
ORF1ab/nsp12285R285CCgtTgt44B.10.000037
ORF1ab/nsp12285R285CCgtTgt33AY.1030.000019
ORF1ab/nsp12285R285CCgtTgt33AY.290.000047
ORF1ab/nsp12285R285CCgtTgt33AY.470.000093
ORF1ab/nsp12285R285CCgtTgt33AY.730.001996
ORF1ab/nsp12285R285CCgtTgt33AY.750.000168
ORF1ab/nsp12285R285CCgtTgt33B.1.10.000054
ORF1ab/nsp12285R285CCgTTgC120.055556
ORF1ab/nsp12285R285CCgtTgt120.055556
ORF1ab/nsp12285R285CCgtTgt22A.280.005291
ORF1ab/nsp12285R285CCgtTgt22AY.1000.000092
ORF1ab/nsp12285R285CCgtTgt22AY.30.00002
ORF1ab/nsp12285R285CCgtTgt22AY.390.000049
ORF1ab/nsp12285R285CCgtTgt22AY.460.000208
ORF1ab/nsp12285R285CCgtTgt22B.1.1.2530.005013
ORF1ab/nsp12285R285CCgtTgt22B.1.1600.000062
ORF1ab/nsp12285R285CCgtTgt22B.1.1770.000026
ORF1ab/nsp12285R285CCgtTgt11A0.000387
ORF1ab/nsp12285R285CCgtTgt11A.2.40.003367
ORF1ab/nsp12285R285CCgtTgt11AY.100.00053
ORF1ab/nsp12285R285CCgtTgt11AY.1060.000335
ORF1ab/nsp12285R285CCgtTgt11AY.1070.000466
ORF1ab/nsp12285R285CCgtTgt11AY.110.001339
ORF1ab/nsp12285R285CCgtTgt11AY.1110.000183
ORF1ab/nsp12285R285CCgtTgt11AY.1190.000035
ORF1ab/nsp12285R285CCgtTgt11AY.120.10.000321
ORF1ab/nsp12285R285CCgtTgt11AY.140.000088
ORF1ab/nsp12285R285CCgtTgt11AY.230.00007
ORF1ab/nsp12285R285CCgtTgt11AY.23.10.000417
ORF1ab/nsp12285R285CCgtTgt11AY.260.000028
ORF1ab/nsp12285R285CCgtTgt11AY.300.000396
ORF1ab/nsp12285R285CCgtTgt11AY.320.000532
ORF1ab/nsp12285R285CCgtTgt11AY.420.00004
ORF1ab/nsp12285R285CCgtTgt11AY.450.000122
ORF1ab/nsp12285R285CCgtTgt11AY.46.40.000165
ORF1ab/nsp12285R285CCgtTgt11AY.50.000021
ORF1ab/nsp12285R285CCgtTgt11AY.740.000116
ORF1ab/nsp12285R285CCgtTgt11AY.9.20.000037
ORF1ab/nsp12285R285CCgtTgt11AY.950.000761
ORF1ab/nsp12285R285CCgtTgt11AY.980.000079
ORF1ab/nsp12285R285CCgtTgt11AY.99.20.000092
ORF1ab/nsp12285R285CCgtTgt11B.1.1.280.000311
ORF1ab/nsp12285R285CCgtTgt11B.1.1.3110.000358
ORF1ab/nsp12285R285CCgtTgt11B.1.1.3980.003226
ORF1ab/nsp12285R285CCgtTgt11B.1.177.210.000076
ORF1ab/nsp12285R285CCgtTgt11B.1.177.730.000566
ORF1ab/nsp12285R285CCgtTgt11B.1.2390.001221
ORF1ab/nsp12285R285CCgtTgt11B.1.258.170.000104
ORF1ab/nsp12285R285CCgtTgt11B.1.360.000146
ORF1ab/nsp12285R285CCgtTgt11B.1.3910.001127
ORF1ab/nsp12285R285CCgtTgt11B.1.4040.001302
ORF1ab/nsp12285R285CCgtTgt11B.1.416.10.001563
ORF1ab/nsp12285R285CCgtTgt11B.1.4270.00005
ORF1ab/nsp12285R285CCgtTgt11B.1.466.20.000391
ORF1ab/nsp12285R285CCgtTgt11B.1.4970.000315
ORF1ab/nsp12285R285CCgtTgt11B.1.5510.00129
ORF1ab/nsp12285R285CCgtTgt11B.1.5950.000261
ORF1ab/nsp12285R285CCgtTgt11B.400.000364
ORF1ab/nsp12285R285CCgtTgt11C.370.000116
ORF1ab/nsp12285R285CCgtTgt11D.20.000075
ORF1ab/nsp12285R285CCgtTgt11P.1.150.000232
ORF1ab/nsp12285R285CCgtTgt11Q.10.000126
ORF1ab/nsp12285R285CCgtTgt11Q.30.000145