CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = R173S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12173R173SR4565SnonsynCgcAgc9696113957-13959

Details of the mutation R173S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12173R173SCgcAgc9696All0.000018
ORF1ab/nsp12173R173SCgcAgc2525B.1.36.80.025
ORF1ab/nsp12173R173SCgcAgc2121B.1.1.70.000019
ORF1ab/nsp12173R173SCgcAgc1414AY.40.000022
ORF1ab/nsp12173R173SCgcAgc88B.1.1.5190.000318
ORF1ab/nsp12173R173SCgcAgc66B.10.000055
ORF1ab/nsp12173R173SCgcAgc66B.1.617.20.000023
ORF1ab/nsp12173R173SCgcAgc22B.1.258.140.001961
ORF1ab/nsp12173R173SCgcAgc110.055556
ORF1ab/nsp12173R173SCgcAgc11AE.80.000489
ORF1ab/nsp12173R173SCgcAgc11AY.340.000097
ORF1ab/nsp12173R173SCgcAgc11AY.360.000148
ORF1ab/nsp12173R173SCgcAgc11AY.430.000004
ORF1ab/nsp12173R173SCgcAgc11AY.46.40.000165
ORF1ab/nsp12173R173SCgcAgc11AY.470.000031
ORF1ab/nsp12173R173SCgcAgc11AY.60.000041
ORF1ab/nsp12173R173SCgcAgc11AY.770.001127
ORF1ab/nsp12173R173SCgcAgc11B.1.1.4200.001006
ORF1ab/nsp12173R173SCgcAgc11B.1.360.000146
ORF1ab/nsp12173R173SCgcAgc11B.1.36.180.00042
ORF1ab/nsp12173R173SCgcAgc11B.1.438.10.000107
ORF1ab/nsp12173R173SCgcAgc11B.1.5960.000087