CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = P323del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12323P323del2P4715del2delcCTc--36320.88888914407-14409
ORF1ab/nsp12323P323del2P4715del2delCCt--t3640.11111114407-14409

Details of the mutation P323del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12323P323del2cCTc--3236All0.000006
ORF1ab/nsp12323P323del2CCt--t436All0.000001
ORF1ab/nsp12323P323del2cCTc--55B.1.20.000044
ORF1ab/nsp12323P323del2cCTc--44B.1.1.70.000004
ORF1ab/nsp12323P323del2cCTc--33AY.440.000018
ORF1ab/nsp12323P323del2cCTc--22AY.1030.000012
ORF1ab/nsp12323P323del2cCTc--22AY.250.000012
ORF1ab/nsp12323P323del2cCTc--12AY.30.00001
ORF1ab/nsp12323P323del2CCt--t12AY.30.00001
ORF1ab/nsp12323P323del2cCTc--22B.10.000018
ORF1ab/nsp12323P323del2cCTc--11AY.1200.000037
ORF1ab/nsp12323P323del2CCt--t11AY.40.000002
ORF1ab/nsp12323P323del2CCt--t11AY.4.50.000107
ORF1ab/nsp12323P323del2CCt--t11AY.430.000004
ORF1ab/nsp12323P323del2cCTc--11AY.750.000056
ORF1ab/nsp12323P323del2cCTc--11B.1.10.000018
ORF1ab/nsp12323P323del2cCTc--11B.1.1.10.000327
ORF1ab/nsp12323P323del2cCTc--11B.1.1.2220.000204
ORF1ab/nsp12323P323del2cCTc--11B.1.1.390.00051
ORF1ab/nsp12323P323del2cCTc--11B.1.1770.000013
ORF1ab/nsp12323P323del2cCTc--11B.1.2430.00007
ORF1ab/nsp12323P323del2cCTc--11B.1.3290.000608
ORF1ab/nsp12323P323del2cCTc--11B.1.4000.000429
ORF1ab/nsp12323P323del2cCTc--11B.1.4290.000024
ORF1ab/nsp12323P323del2cCTc--11B.1.575.10.002439
ORF1ab/nsp12323P323del2cCTc--11B.1.617.20.000004