CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = P264S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12264P264SP4656SnonsynCctTct190719050.99895114230-14232
ORF1ab/nsp12264P264SP4656SnonsynCcTTcA190710.00052438414230-14232
ORF1ab/nsp12264P264SP4656SnonsynCcTTcC190710.00052438414230-14232

Details of the mutation P264S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12264P264SCctTct19051907All0.000364
ORF1ab/nsp12264P264SCcTTcA11907All0
ORF1ab/nsp12264P264SCcTTcC11907All0
ORF1ab/nsp12264P264SCctTct716716B.1.1.3770.98895
ORF1ab/nsp12264P264SCctTct219219B.1.1.70.000196
ORF1ab/nsp12264P264SCctTct134134AY.1130.01908
ORF1ab/nsp12264P264SCctTct8282AY.390.002026
ORF1ab/nsp12264P264SCctTct8181B.1.617.20.000305
ORF1ab/nsp12264P264SCctTct6666AY.40.000103
ORF1ab/nsp12264P264SCctTct4343AY.1030.000267
ORF1ab/nsp12264P264SCctTct3939B.1.20.000343
ORF1ab/nsp12264P264SCctTct3434B.1.2430.002366
ORF1ab/nsp12264P264SCctTct3131B.1.4800.077114
ORF1ab/nsp12264P264SCctTct3030B.10.000275
ORF1ab/nsp12264P264SCctTct2929AY.300.011476
ORF1ab/nsp12264P264SCctTct2828B.1.1.560.5
ORF1ab/nsp12264P264SCctTct2626AY.440.000158
ORF1ab/nsp12264P264SCctTct1818B.1.5960.001568
ORF1ab/nsp12264P264SCctTct1717P.10.000268
ORF1ab/nsp12264P264SCctTct1616B.1.1770.000211
ORF1ab/nsp12264P264SCctTct1515AY.1020.000398
ORF1ab/nsp12264P264SCctTct1212AY.250.000072
ORF1ab/nsp12264P264SCctTct1212AY.3.10.001023
ORF1ab/nsp12264P264SCctTct1111AY.430.000049
ORF1ab/nsp12264P264SCctTct1010AY.610.001048
ORF1ab/nsp12264P264SCctTct1010B.1.177.760.024938
ORF1ab/nsp12264P264SCctTct99B.1.5970.041667
ORF1ab/nsp12264P264SCctTct88B.1.177.40.001688
ORF1ab/nsp12264P264SCctTct88B.520.080808
ORF1ab/nsp12264P264SCctTct77B.1.1490.023973
ORF1ab/nsp12264P264SCctTct66B0.000767
ORF1ab/nsp12264P264SCctTct66B.1.4290.000141
ORF1ab/nsp12264P264SCctTct55AY.1100.000563
ORF1ab/nsp12264P264SCctTct55AY.1190.000177
ORF1ab/nsp12264P264SCctTct55AY.30.00005
ORF1ab/nsp12264P264SCctTct55AY.460.00052
ORF1ab/nsp12264P264SCctTct55AY.740.000578
ORF1ab/nsp12264P264SCctTct55B.1.360.00073
ORF1ab/nsp12264P264SCctTct55C.370.00058
ORF1ab/nsp12264P264SCctTct44AY.39.10.000158
ORF1ab/nsp12264P264SCctTct44AY.980.000316
ORF1ab/nsp12264P264SCctTct44B.1.177.70.000659
ORF1ab/nsp12264P264SCctTct44B.1.4980.081633
ORF1ab/nsp12264P264SCctTct44P.1.150.000929
ORF1ab/nsp12264P264SCctTct44Q.10.000505
ORF1ab/nsp12264P264SCctTct44Q.30.00058
ORF1ab/nsp12264P264SCcTTcC130.055556
ORF1ab/nsp12264P264SCcTTcA130.055556
ORF1ab/nsp12264P264SCctTct130.055556
ORF1ab/nsp12264P264SCctTct33A0.001161
ORF1ab/nsp12264P264SCctTct33AY.230.000209
ORF1ab/nsp12264P264SCctTct33AY.290.000047
ORF1ab/nsp12264P264SCctTct33AY.46.40.000494
ORF1ab/nsp12264P264SCctTct33B.1.10.000054
ORF1ab/nsp12264P264SCctTct33B.1.177.540.001819
ORF1ab/nsp12264P264SCctTct33D.20.000225
ORF1ab/nsp12264P264SCctTct33P.1.140.000143
ORF1ab/nsp12264P264SCctTct22AY.1000.000092
ORF1ab/nsp12264P264SCctTct22AY.1170.000169
ORF1ab/nsp12264P264SCctTct22AY.1200.000074
ORF1ab/nsp12264P264SCctTct22AY.200.000078
ORF1ab/nsp12264P264SCctTct22AY.420.00008
ORF1ab/nsp12264P264SCctTct22AY.450.000243
ORF1ab/nsp12264P264SCctTct22AY.620.000871
ORF1ab/nsp12264P264SCctTct22AY.9.20.000073
ORF1ab/nsp12264P264SCctTct22B.1.1.4340.000697
ORF1ab/nsp12264P264SCctTct22B.1.1.4860.003155
ORF1ab/nsp12264P264SCctTct22B.1.177.730.001133
ORF1ab/nsp12264P264SCctTct22B.1.177.860.000367
ORF1ab/nsp12264P264SCctTct22B.1.2340.000264
ORF1ab/nsp12264P264SCctTct22B.1.3970.009709
ORF1ab/nsp12264P264SCctTct22B.1.4270.000101
ORF1ab/nsp12264P264SCctTct22B.1.5260.000047
ORF1ab/nsp12264P264SCctTct22B.1.6300.010471
ORF1ab/nsp12264P264SCctTct11AY.100.00053
ORF1ab/nsp12264P264SCctTct11AY.1180.000063
ORF1ab/nsp12264P264SCctTct11AY.140.000088
ORF1ab/nsp12264P264SCctTct11AY.16.10.00047
ORF1ab/nsp12264P264SCctTct11AY.260.000028
ORF1ab/nsp12264P264SCctTct11AY.340.000097
ORF1ab/nsp12264P264SCctTct11AY.4.2.10.000149
ORF1ab/nsp12264P264SCctTct11AY.4.50.000107
ORF1ab/nsp12264P264SCctTct11AY.46.50.000198
ORF1ab/nsp12264P264SCctTct11AY.50.000021
ORF1ab/nsp12264P264SCctTct11AY.540.000095
ORF1ab/nsp12264P264SCctTct11AY.580.000907
ORF1ab/nsp12264P264SCctTct11AY.60.000041
ORF1ab/nsp12264P264SCctTct11AY.7.10.000113
ORF1ab/nsp12264P264SCctTct11AY.710.000475
ORF1ab/nsp12264P264SCctTct11AY.750.000056
ORF1ab/nsp12264P264SCctTct11AY.75.10.00018
ORF1ab/nsp12264P264SCctTct11AY.840.000437
ORF1ab/nsp12264P264SCctTct11AY.850.000427
ORF1ab/nsp12264P264SCctTct11AY.920.000287
ORF1ab/nsp12264P264SCctTct11B.1.1.1980.001468
ORF1ab/nsp12264P264SCctTct11B.1.1.2170.003636
ORF1ab/nsp12264P264SCctTct11B.1.1.280.000311
ORF1ab/nsp12264P264SCctTct11B.1.1.2840.000107
ORF1ab/nsp12264P264SCctTct11B.1.1.30.008696
ORF1ab/nsp12264P264SCctTct11B.1.1.3060.000438
ORF1ab/nsp12264P264SCctTct11B.1.1.3160.000925
ORF1ab/nsp12264P264SCctTct11B.1.1.3180.000302
ORF1ab/nsp12264P264SCctTct11B.1.1.3260.001761
ORF1ab/nsp12264P264SCctTct11B.1.1.330.000421
ORF1ab/nsp12264P264SCctTct11B.1.1.4320.001266
ORF1ab/nsp12264P264SCctTct11B.1.1.500.000679
ORF1ab/nsp12264P264SCctTct11B.1.1.5260.003546
ORF1ab/nsp12264P264SCctTct11B.1.177.420.000894
ORF1ab/nsp12264P264SCctTct11B.1.177.710.010101
ORF1ab/nsp12264P264SCctTct11B.1.177.810.000189
ORF1ab/nsp12264P264SCctTct11B.1.177.870.000728
ORF1ab/nsp12264P264SCctTct11B.1.2210.000071
ORF1ab/nsp12264P264SCctTct11B.1.2400.000216
ORF1ab/nsp12264P264SCctTct11B.1.2580.000067
ORF1ab/nsp12264P264SCctTct11B.1.3110.000275
ORF1ab/nsp12264P264SCctTct11B.1.3510.00003
ORF1ab/nsp12264P264SCctTct11B.1.36.170.000494
ORF1ab/nsp12264P264SCctTct11B.1.36.360.000602
ORF1ab/nsp12264P264SCctTct11B.1.3670.000792
ORF1ab/nsp12264P264SCctTct11B.1.3690.000285
ORF1ab/nsp12264P264SCctTct11B.1.3770.004566
ORF1ab/nsp12264P264SCctTct11B.1.416.10.001563
ORF1ab/nsp12264P264SCctTct11B.1.4590.004082
ORF1ab/nsp12264P264SCctTct11B.1.5230.002451
ORF1ab/nsp12264P264SCctTct11B.1.5750.000303
ORF1ab/nsp12264P264SCctTct11B.1.5950.000261
ORF1ab/nsp12264P264SCctTct11B.1.6000.005848
ORF1ab/nsp12264P264SCctTct11B.1.6210.000089
ORF1ab/nsp12264P264SCctTct11B.1.80.001972
ORF1ab/nsp12264P264SCctTct11C.160.00106
ORF1ab/nsp12264P264SCctTct11C.360.000911
ORF1ab/nsp12264P264SCctTct11P.1.120.000484
ORF1ab/nsp12264P264SCctTct11P.1.40.000977
ORF1ab/nsp12264P264SCctTct11Q.80.000165