CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = P227T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12227P227TP4619TnonsynCcaAca1121110.99107114119-14121
ORF1ab/nsp12227P227TP4619TnonsynCcAAcC11210.0089285714119-14121

Details of the mutation P227T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12227P227TCcaAca111112All0.000021
ORF1ab/nsp12227P227TCcAAcC1112All0
ORF1ab/nsp12227P227TCcaAca2121B.1.1.3180.006337
ORF1ab/nsp12227P227TCcaAca1515AY.1190.00053
ORF1ab/nsp12227P227TCcaAca1212AY.40.000019
ORF1ab/nsp12227P227TCcaAca1111B.1.1.70.00001
ORF1ab/nsp12227P227TCcaAca99B.1.617.20.000034
ORF1ab/nsp12227P227TCcaAca88AY.1030.00005
ORF1ab/nsp12227P227TCcaAca44AY.440.000024
ORF1ab/nsp12227P227TCcaAca44AY.470.000124
ORF1ab/nsp12227P227TCcaAca33AY.290.000047
ORF1ab/nsp12227P227TCcaAca33AY.360.000445
ORF1ab/nsp12227P227TCcaAca33B.1.360.000438
ORF1ab/nsp12227P227TCcaAca22AY.1020.000053
ORF1ab/nsp12227P227TCcaAca22AY.250.000012
ORF1ab/nsp12227P227TCcaAca22AY.430.000009
ORF1ab/nsp12227P227TCcaAca11AY.1200.000037
ORF1ab/nsp12227P227TCcaAca11AY.200.000039
ORF1ab/nsp12227P227TCcaAca11AY.330.000067
ORF1ab/nsp12227P227TCcaAca11AY.4.20.000022
ORF1ab/nsp12227P227TCcaAca11AY.46.10.001027
ORF1ab/nsp12227P227TCcaAca11AY.930.000273
ORF1ab/nsp12227P227TCcaAca11B.10.000009
ORF1ab/nsp12227P227TCcaAca11B.1.1.630.000386
ORF1ab/nsp12227P227TCcaAca11B.1.1770.000013
ORF1ab/nsp12227P227TCcaAca11B.1.177.180.00116
ORF1ab/nsp12227P227TCcaAca11B.1.177.70.000165
ORF1ab/nsp12227P227TCcAAcC11B.1.20.000009
ORF1ab/nsp12227P227TCcaAca11P.10.000016