CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = P227S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12227P227SP4619SnonsynCcaTca419641950.99976214119-14121
ORF1ab/nsp12227P227SP4619SnonsynCcATcT419610.00023832214119-14121

Details of the mutation P227S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12227P227SCcaTca41954196All0.000802
ORF1ab/nsp12227P227SCcATcT14196All0
ORF1ab/nsp12227P227SCcaTca30193019AY.410.887419
ORF1ab/nsp12227P227SCcaTca184184B.1.1.2040.559271
ORF1ab/nsp12227P227SCcaTca171171B.1.1.70.000153
ORF1ab/nsp12227P227SCcaTca103103AY.40.00016
ORF1ab/nsp12227P227SCcaTca7676B.1.5260.001786
ORF1ab/nsp12227P227SCcaTca6868AY.1030.000422
ORF1ab/nsp12227P227SCcaTca5050B.10.000458
ORF1ab/nsp12227P227SCcaTca4343B.1.1.4640.063328
ORF1ab/nsp12227P227SCcaTca2929B.1.1770.000382
ORF1ab/nsp12227P227SCcaTca2525AY.440.000152
ORF1ab/nsp12227P227SCcaTca2424B.1.1.3110.008596
ORF1ab/nsp12227P227SCcaTca2222B.1.20.000194
ORF1ab/nsp12227P227SCcaTca2222B.1.2430.001531
ORF1ab/nsp12227P227SCcaTca2020B.1.1.1590.093458
ORF1ab/nsp12227P227SCcaTca2020B.1.3510.000595
ORF1ab/nsp12227P227SCcaTca1818AY.430.00008
ORF1ab/nsp12227P227SCcaTca1616B.1.617.20.00006
ORF1ab/nsp12227P227SCcaTca1515B.1.617.10.001934
ORF1ab/nsp12227P227SCcaTca1414P.10.000221
ORF1ab/nsp12227P227SCcaTca1212B.1.10.000218
ORF1ab/nsp12227P227SCcaTca1212B.1.1.10.00392
ORF1ab/nsp12227P227SCcaTca1111AY.250.000066
ORF1ab/nsp12227P227SCcaTca1111B.1.30.028796
ORF1ab/nsp12227P227SCcaTca99AY.1190.000318
ORF1ab/nsp12227P227SCcaTca88B.1.1.4340.002788
ORF1ab/nsp12227P227SCcaTca77AY.200.000272
ORF1ab/nsp12227P227SCcaTca77B.1.2580.000466
ORF1ab/nsp12227P227SCcaTca77B.1.4290.000165
ORF1ab/nsp12227P227SCcaTca66AY.470.000187
ORF1ab/nsp12227P227SCcaTca66B.1.1600.000187
ORF1ab/nsp12227P227SCcaTca66B.1.177.730.003398
ORF1ab/nsp12227P227SCcaTca66C.370.000696
ORF1ab/nsp12227P227SCcaTca55P.1.140.000239
ORF1ab/nsp12227P227SCcaTca44AY.4.20.000087
ORF1ab/nsp12227P227SCcaTca44AY.460.000416
ORF1ab/nsp12227P227SCcaTca44B0.000511
ORF1ab/nsp12227P227SCcaTca44B.1.177.150.002524
ORF1ab/nsp12227P227SCcaTca44B.1.4270.000202
ORF1ab/nsp12227P227SCcaTca33AY.1180.000188
ORF1ab/nsp12227P227SCcaTca33AY.260.000085
ORF1ab/nsp12227P227SCcaTca33AY.420.000121
ORF1ab/nsp12227P227SCcaTca33AY.750.000168
ORF1ab/nsp12227P227SCcaTca33B.1.1.3690.001339
ORF1ab/nsp12227P227SCcaTca33B.1.1.5190.000119
ORF1ab/nsp12227P227SCcaTca33B.1.1.5260.010638
ORF1ab/nsp12227P227SCcaTca33B.1.3690.000856
ORF1ab/nsp12227P227SCcaTca33D.20.000225
ORF1ab/nsp12227P227SCcaTca120.055556
ORF1ab/nsp12227P227SCcATcT120.055556
ORF1ab/nsp12227P227SCcaTca22AY.1060.00067
ORF1ab/nsp12227P227SCcaTca22AY.320.001065
ORF1ab/nsp12227P227SCcaTca22AY.330.000134
ORF1ab/nsp12227P227SCcaTca22AY.390.000049
ORF1ab/nsp12227P227SCcaTca22AY.39.10.000079
ORF1ab/nsp12227P227SCcaTca22AY.50.000041
ORF1ab/nsp12227P227SCcaTca22AY.690.000373
ORF1ab/nsp12227P227SCcaTca22AY.9.20.000073
ORF1ab/nsp12227P227SCcaTca22AY.99.20.000184
ORF1ab/nsp12227P227SCcaTca22B.1.1.3440.021505
ORF1ab/nsp12227P227SCcaTca22B.1.1.3720.001377
ORF1ab/nsp12227P227SCcaTca22B.1.177.360.032258
ORF1ab/nsp12227P227SCcaTca22B.1.177.740.030303
ORF1ab/nsp12227P227SCcaTca22B.1.214.20.001199
ORF1ab/nsp12227P227SCcaTca22B.1.2320.001075
ORF1ab/nsp12227P227SCcaTca22B.1.2340.000264
ORF1ab/nsp12227P227SCcaTca22B.1.6210.000177
ORF1ab/nsp12227P227SCcaTca22P.1.100.000539
ORF1ab/nsp12227P227SCcaTca22P.1.60.003891
ORF1ab/nsp12227P227SCcaTca11A.230.010526
ORF1ab/nsp12227P227SCcaTca11AY.1170.000085
ORF1ab/nsp12227P227SCcaTca11AY.1200.000037
ORF1ab/nsp12227P227SCcaTca11AY.230.00007
ORF1ab/nsp12227P227SCcaTca11AY.30.00001
ORF1ab/nsp12227P227SCcaTca11AY.46.50.000198
ORF1ab/nsp12227P227SCcaTca11AY.5.40.000277
ORF1ab/nsp12227P227SCcaTca11AY.540.000095
ORF1ab/nsp12227P227SCcaTca11AY.600.000938
ORF1ab/nsp12227P227SCcaTca11AY.720.001361
ORF1ab/nsp12227P227SCcaTca11AY.90.000068
ORF1ab/nsp12227P227SCcaTca11AY.98.10.000048
ORF1ab/nsp12227P227SCcaTca11B.1.1.1330.008475
ORF1ab/nsp12227P227SCcaTca11B.1.1.1350.004695
ORF1ab/nsp12227P227SCcaTca11B.1.1.1370.0125
ORF1ab/nsp12227P227SCcaTca11B.1.1.1920.002309
ORF1ab/nsp12227P227SCcaTca11B.1.1.2140.000055
ORF1ab/nsp12227P227SCcaTca11B.1.1.2300.009174
ORF1ab/nsp12227P227SCcaTca11B.1.1.2630.001558
ORF1ab/nsp12227P227SCcaTca11B.1.1.2940.001266
ORF1ab/nsp12227P227SCcaTca11B.1.1.3060.000438
ORF1ab/nsp12227P227SCcaTca11B.1.1.3170.000412
ORF1ab/nsp12227P227SCcaTca11B.1.1.3180.000302
ORF1ab/nsp12227P227SCcaTca11B.1.1.330.000421
ORF1ab/nsp12227P227SCcaTca11B.1.1.3480.000796
ORF1ab/nsp12227P227SCcaTca11B.1.1.3510.002793
ORF1ab/nsp12227P227SCcaTca11B.1.1.3570.125
ORF1ab/nsp12227P227SCcaTca11B.1.1.4090.002833
ORF1ab/nsp12227P227SCcaTca11B.1.1.500.000679
ORF1ab/nsp12227P227SCcaTca11B.1.1.540.003021
ORF1ab/nsp12227P227SCcaTca11B.1.1.630.000386
ORF1ab/nsp12227P227SCcaTca11B.1.1.700.000341
ORF1ab/nsp12227P227SCcaTca11B.1.1570.002985
ORF1ab/nsp12227P227SCcaTca11B.1.177.580.001332
ORF1ab/nsp12227P227SCcaTca11B.1.177.80.000752
ORF1ab/nsp12227P227SCcaTca11B.1.2060.000816
ORF1ab/nsp12227P227SCcaTca11B.1.2210.000071
ORF1ab/nsp12227P227SCcaTca11B.1.2350.002519
ORF1ab/nsp12227P227SCcaTca11B.1.258.170.000104
ORF1ab/nsp12227P227SCcaTca11B.1.3110.000275
ORF1ab/nsp12227P227SCcaTca11B.1.36.10.00114
ORF1ab/nsp12227P227SCcaTca11B.1.36.310.001751
ORF1ab/nsp12227P227SCcaTca11B.1.3750.00082
ORF1ab/nsp12227P227SCcaTca11B.1.390.003906
ORF1ab/nsp12227P227SCcaTca11B.1.4220.000812
ORF1ab/nsp12227P227SCcaTca11B.1.4800.002488
ORF1ab/nsp12227P227SCcaTca11B.1.5170.000427
ORF1ab/nsp12227P227SCcaTca11B.1.5510.00129
ORF1ab/nsp12227P227SCcaTca11B.1.5610.000397
ORF1ab/nsp12227P227SCcaTca11B.1.6230.000536
ORF1ab/nsp12227P227SCcaTca11B.1.6370.000073
ORF1ab/nsp12227P227SCcaTca11B.400.000364
ORF1ab/nsp12227P227SCcaTca11B.60.00091
ORF1ab/nsp12227P227SCcaTca11P.1.120.000484
ORF1ab/nsp12227P227SCcaTca11P.1.150.000232
ORF1ab/nsp12227P227SCcaTca11Q.10.000126
ORF1ab/nsp12227P227SCcaTca11W.40.001351