CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = P169P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12169P169PP4561PsynccAccG16457030.42735613945-13947
ORF1ab/nsp12169P169PP4561PsynccAccT16456870.41762913945-13947
ORF1ab/nsp12169P169PP4561PsynccAccC16452550.15501513945-13947

Details of the mutation P169P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12169P169PccAccG7031645All0.000134
ORF1ab/nsp12169P169PccAccT6871645All0.000131
ORF1ab/nsp12169P169PccAccC2551645All0.000049
ORF1ab/nsp12169P169PccAccG433526B.1.1.70.000388
ORF1ab/nsp12169P169PccAccT87526B.1.1.70.000078
ORF1ab/nsp12169P169PccAccC6526B.1.1.70.000005
ORF1ab/nsp12169P169PccAccT218378AY.40.000339
ORF1ab/nsp12169P169PccAccG158378AY.40.000246
ORF1ab/nsp12169P169PccAccC2378AY.40.000003
ORF1ab/nsp12169P169PccAccC125126AY.1000.005751
ORF1ab/nsp12169P169PccAccT1126AY.1000.000046
ORF1ab/nsp12169P169PccAccT107118AY.250.000644
ORF1ab/nsp12169P169PccAccG8118AY.250.000048
ORF1ab/nsp12169P169PccAccC3118AY.250.000018
ORF1ab/nsp12169P169PccAccT8789B.1.10.001578
ORF1ab/nsp12169P169PccAccC289B.1.10.000036
ORF1ab/nsp12169P169PccAccC6378B.1.617.20.000237
ORF1ab/nsp12169P169PccAccT1178B.1.617.20.000041
ORF1ab/nsp12169P169PccAccG478B.1.617.20.000015
ORF1ab/nsp12169P169PccAccT6974B.1.20.000608
ORF1ab/nsp12169P169PccAccG374B.1.20.000026
ORF1ab/nsp12169P169PccAccC274B.1.20.000018
ORF1ab/nsp12169P169PccAccG3957AY.30.000388
ORF1ab/nsp12169P169PccAccT1857AY.30.000179
ORF1ab/nsp12169P169PccAccT1424AY.440.000085
ORF1ab/nsp12169P169PccAccC724AY.440.000043
ORF1ab/nsp12169P169PccAccG324AY.440.000018
ORF1ab/nsp12169P169PccAccT1414B.1.30.036649
ORF1ab/nsp12169P169PccAccC1414B.1.4090.010937
ORF1ab/nsp12169P169PccAccG1313Q.80.002144
ORF1ab/nsp12169P169PccAccT811B.1.1600.00025
ORF1ab/nsp12169P169PccAccG311B.1.1600.000094
ORF1ab/nsp12169P169PccAccT89B.1.4290.000188
ORF1ab/nsp12169P169PccAccG19B.1.4290.000024
ORF1ab/nsp12169P169PccAccC88AY.1180.000501
ORF1ab/nsp12169P169PccAccT88AY.290.000126
ORF1ab/nsp12169P169PccAccC67AY.420.000241
ORF1ab/nsp12169P169PccAccG17AY.420.00004
ORF1ab/nsp12169P169PccAccT66B.10.000055
ORF1ab/nsp12169P169PccAccT45AY.430.000018
ORF1ab/nsp12169P169PccAccG15AY.430.000004
ORF1ab/nsp12169P169PccAccG44AY.160.001519
ORF1ab/nsp12169P169PccAccG44AY.330.000267
ORF1ab/nsp12169P169PccAccC44AY.4.20.000087
ORF1ab/nsp12169P169PccAccG44AY.610.000419
ORF1ab/nsp12169P169PccAccT44B.1.4080.01476
ORF1ab/nsp12169P169PccAccT23AY.1030.000012
ORF1ab/nsp12169P169PccAccC13AY.1030.000006
ORF1ab/nsp12169P169PccAccG23AY.200.000078
ORF1ab/nsp12169P169PccAccC13AY.200.000039
ORF1ab/nsp12169P169PccAccC23AY.39.10.000079
ORF1ab/nsp12169P169PccAccG13AY.39.10.00004
ORF1ab/nsp12169P169PccAccT33AY.470.000093
ORF1ab/nsp12169P169PccAccG33AY.99.20.000276
ORF1ab/nsp12169P169PccAccG120.055556
ORF1ab/nsp12169P169PccAccC120.055556
ORF1ab/nsp12169P169PccAccT12AY.230.00007
ORF1ab/nsp12169P169PccAccG12AY.230.00007
ORF1ab/nsp12169P169PccAccG22AY.390.000049
ORF1ab/nsp12169P169PccAccT22AY.50.000041
ORF1ab/nsp12169P169PccAccG12B.1.360.000146
ORF1ab/nsp12169P169PccAccT12B.1.360.000146
ORF1ab/nsp12169P169PccAccG22P.10.000032
ORF1ab/nsp12169P169PccAccT11AY.1020.000027
ORF1ab/nsp12169P169PccAccT11AY.1130.000142
ORF1ab/nsp12169P169PccAccG11AY.1140.000231
ORF1ab/nsp12169P169PccAccG11AY.1170.000085
ORF1ab/nsp12169P169PccAccC11AY.120.000316
ORF1ab/nsp12169P169PccAccT11AY.120.10.000321
ORF1ab/nsp12169P169PccAccG11AY.260.000028
ORF1ab/nsp12169P169PccAccT11AY.410.000294
ORF1ab/nsp12169P169PccAccT11AY.46.60.000072
ORF1ab/nsp12169P169PccAccC11AY.5.30.000337
ORF1ab/nsp12169P169PccAccG11AY.5.40.000277
ORF1ab/nsp12169P169PccAccT11AY.750.000056
ORF1ab/nsp12169P169PccAccG11AY.75.10.00018
ORF1ab/nsp12169P169PccAccG11AY.80.000606
ORF1ab/nsp12169P169PccAccT11AY.850.000427
ORF1ab/nsp12169P169PccAccG11AY.9.10.000084
ORF1ab/nsp12169P169PccAccC11AY.920.000287
ORF1ab/nsp12169P169PccAccC11AY.980.000079
ORF1ab/nsp12169P169PccAccC11AY.98.10.000048
ORF1ab/nsp12169P169PccAccT11B.1.1.2140.000055
ORF1ab/nsp12169P169PccAccC11B.1.1.2220.000204
ORF1ab/nsp12169P169PccAccT11B.1.1.370.000193
ORF1ab/nsp12169P169PccAccG11B.1.1.4330.001425
ORF1ab/nsp12169P169PccAccC11B.1.1770.000013
ORF1ab/nsp12169P169PccAccT11B.1.2100.002132
ORF1ab/nsp12169P169PccAccC11B.1.221.30.000833
ORF1ab/nsp12169P169PccAccG11B.1.3400.004292
ORF1ab/nsp12169P169PccAccT11B.1.351.20.000303
ORF1ab/nsp12169P169PccAccG11B.1.5760.000907
ORF1ab/nsp12169P169PccAccT11B.1.5960.000087
ORF1ab/nsp12169P169PccAccT11B.1.6060.006024
ORF1ab/nsp12169P169PccAccT11B.1.6200.000946
ORF1ab/nsp12169P169PccAccG11B.530.011765