CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = M666T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12666M666TM5058TnonsynaTgaCg4614580.99349215436-15438
ORF1ab/nsp12666M666TM5058TnonsynaTGaCT46130.0065075915436-15438

Details of the mutation M666T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12666M666TaTgaCg458461All0.000088
ORF1ab/nsp12666M666TaTGaCT3461All0.000001
ORF1ab/nsp12666M666TaTgaCg150150C.2.11
ORF1ab/nsp12666M666TaTgaCg7373AY.50.001507
ORF1ab/nsp12666M666TaTgaCg3737C.20.596774
ORF1ab/nsp12666M666TaTgaCg3535B.1.1.70.000031
ORF1ab/nsp12666M666TaTgaCg2121B.1.1.2140.001165
ORF1ab/nsp12666M666TaTgaCg1919AY.40.00003
ORF1ab/nsp12666M666TaTgaCg1414AY.330.000935
ORF1ab/nsp12666M666TaTgaCg1313B.1.2580.000865
ORF1ab/nsp12666M666TaTgaCg99B.1.10.000163
ORF1ab/nsp12666M666TaTgaCg88B.10.000073
ORF1ab/nsp12666M666TaTgaCg88B.1.2430.000557
ORF1ab/nsp12666M666TaTgaCg66AY.260.00017
ORF1ab/nsp12666M666TaTgaCg66AY.30.00006
ORF1ab/nsp12666M666TaTgaCg66B.1.4280.006122
ORF1ab/nsp12666M666TaTgaCg55B.1.20.000044
ORF1ab/nsp12666M666TaTgaCg44AY.1030.000025
ORF1ab/nsp12666M666TaTgaCg44AY.3.10.000341
ORF1ab/nsp12666M666TaTgaCg33AY.250.000018
ORF1ab/nsp12666M666TaTgaCg33AY.430.000013
ORF1ab/nsp12666M666TaTgaCg33B.1.258.170.000312
ORF1ab/nsp12666M666TaTgaCg33B.1.617.20.000011
ORF1ab/nsp12666M666TaTgaCg33B.1.6370.000219
ORF1ab/nsp12666M666TaTgaCg22AY.1060.00067
ORF1ab/nsp12666M666TaTgaCg22AY.90.000135
ORF1ab/nsp12666M666TaTgaCg22B.1.1.10.000653
ORF1ab/nsp12666M666TaTGaCT22B.1.1.500.001358
ORF1ab/nsp12666M666TaTgaCg22B.1.3510.000059
ORF1ab/nsp12666M666TaTgaCg11AY.1170.000085
ORF1ab/nsp12666M666TaTgaCg11AY.16.10.00047
ORF1ab/nsp12666M666TaTgaCg11AY.200.000039
ORF1ab/nsp12666M666TaTgaCg11AY.230.00007
ORF1ab/nsp12666M666TaTgaCg11AY.290.000016
ORF1ab/nsp12666M666TaTgaCg11AY.470.000031
ORF1ab/nsp12666M666TaTgaCg11AY.690.000187
ORF1ab/nsp12666M666TaTgaCg11AY.980.000079
ORF1ab/nsp12666M666TaTgaCg11B.1.1.1760.000439
ORF1ab/nsp12666M666TaTgaCg11B.1.1.2050.003717
ORF1ab/nsp12666M666TaTgaCg11B.1.160.260.002421
ORF1ab/nsp12666M666TaTgaCg11B.1.1770.000013
ORF1ab/nsp12666M666TaTgaCg11B.1.177.600.000218
ORF1ab/nsp12666M666TaTgaCg11B.1.360.000146
ORF1ab/nsp12666M666TaTGaCT11B.1.36.180.00042
ORF1ab/nsp12666M666TaTgaCg11B.1.4290.000024
ORF1ab/nsp12666M666TaTgaCg11B.1.5260.000024
ORF1ab/nsp12666M666TaTgaCg11C.350.000774