CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = M666I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12666M666IM5058InonsynatGatT631160060.95167215436-15438
ORF1ab/nsp12666M666IM5058InonsynatGatA63112530.040088715436-15438
ORF1ab/nsp12666M666IM5058InonsynatGatC6311520.0082395815436-15438

Details of the mutation M666I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12666M666IatGatT60066311All0.001149
ORF1ab/nsp12666M666IatGatA2536311All0.000048
ORF1ab/nsp12666M666IatGatC526311All0.00001
ORF1ab/nsp12666M666IatGatT23152315B.1.36.180.972689
ORF1ab/nsp12666M666IatGatT14411441B.1.1.500.978276
ORF1ab/nsp12666M666IatGatT356356B.1.2230.988889
ORF1ab/nsp12666M666IatGatT248257B.10.002272
ORF1ab/nsp12666M666IatGatA8257B.10.000073
ORF1ab/nsp12666M666IatGatC1257B.10.000009
ORF1ab/nsp12666M666IatGatT255255B.1.4110.944444
ORF1ab/nsp12666M666IatGatT206237AY.30.002049
ORF1ab/nsp12666M666IatGatA31237AY.30.000308
ORF1ab/nsp12666M666IatGatT144230AY.40.000224
ORF1ab/nsp12666M666IatGatA86230AY.40.000134
ORF1ab/nsp12666M666IatGatT144163B.1.617.20.000542
ORF1ab/nsp12666M666IatGatA16163B.1.617.20.00006
ORF1ab/nsp12666M666IatGatC3163B.1.617.20.000011
ORF1ab/nsp12666M666IatGatT157157B.1.5320.975155
ORF1ab/nsp12666M666IatGatT8990B.1.1770.001172
ORF1ab/nsp12666M666IatGatC190B.1.1770.000013
ORF1ab/nsp12666M666IatGatT4561B.1.1.70.00004
ORF1ab/nsp12666M666IatGatC1261B.1.1.70.000011
ORF1ab/nsp12666M666IatGatA461B.1.1.70.000004
ORF1ab/nsp12666M666IatGatT4649B.1.20.000405
ORF1ab/nsp12666M666IatGatA349B.1.20.000026
ORF1ab/nsp12666M666IatGatT3147AY.430.000137
ORF1ab/nsp12666M666IatGatA1547AY.430.000066
ORF1ab/nsp12666M666IatGatC147AY.430.000004
ORF1ab/nsp12666M666IatGatT4040B.1.2430.002783
ORF1ab/nsp12666M666IatGatT3838B.1.5910.404255
ORF1ab/nsp12666M666IatGatT3838C.160.040297
ORF1ab/nsp12666M666IatGatT3636AY.840.015748
ORF1ab/nsp12666M666IatGatC2331AY.440.00014
ORF1ab/nsp12666M666IatGatT631AY.440.000037
ORF1ab/nsp12666M666IatGatA231AY.440.000012
ORF1ab/nsp12666M666IatGatT2629AY.200.00101
ORF1ab/nsp12666M666IatGatA329AY.200.000117
ORF1ab/nsp12666M666IatGatT2424B.1.10.000435
ORF1ab/nsp12666M666IatGatT2222B.1.2400.004742
ORF1ab/nsp12666M666IatGatT1819AY.60.00074
ORF1ab/nsp12666M666IatGatA119AY.60.000041
ORF1ab/nsp12666M666IatGatA1919B.1.1.3060.00833
ORF1ab/nsp12666M666IatGatT1314AY.250.000078
ORF1ab/nsp12666M666IatGatA114AY.250.000006
ORF1ab/nsp12666M666IatGatT1214AY.50.000248
ORF1ab/nsp12666M666IatGatA214AY.50.000041
ORF1ab/nsp12666M666IatGatT812AY.1030.00005
ORF1ab/nsp12666M666IatGatA412AY.1030.000025
ORF1ab/nsp12666M666IatGatT1112B.1.1600.000343
ORF1ab/nsp12666M666IatGatA112B.1.1600.000031
ORF1ab/nsp12666M666IatGatT911AY.1020.000239
ORF1ab/nsp12666M666IatGatC211AY.1020.000053
ORF1ab/nsp12666M666IatGatT1011B0.001278
ORF1ab/nsp12666M666IatGatA111B0.000128
ORF1ab/nsp12666M666IatGatA710B.1.1.5190.000278
ORF1ab/nsp12666M666IatGatT310B.1.1.5190.000119
ORF1ab/nsp12666M666IatGatT1010B.1.4090.007812
ORF1ab/nsp12666M666IatGatT99B.1.1.3050.034749
ORF1ab/nsp12666M666IatGatT89B.1.2580.000532
ORF1ab/nsp12666M666IatGatA19B.1.2580.000067
ORF1ab/nsp12666M666IatGatA88AY.4.20.000174
ORF1ab/nsp12666M666IatGatT67AY.290.000095
ORF1ab/nsp12666M666IatGatA17AY.290.000016
ORF1ab/nsp12666M666IatGatT77B.1.1.280.002179
ORF1ab/nsp12666M666IatGatT56AY.1000.00023
ORF1ab/nsp12666M666IatGatA16AY.1000.000046
ORF1ab/nsp12666M666IatGatT66B.1.1.2160.005343
ORF1ab/nsp12666M666IatGatC46B.1.1.270.022599
ORF1ab/nsp12666M666IatGatT26B.1.1.270.011299
ORF1ab/nsp12666M666IatGatT56B.1.258.170.00052
ORF1ab/nsp12666M666IatGatC16B.1.258.170.000104
ORF1ab/nsp12666M666IatGatT66B.1.3110.001647
ORF1ab/nsp12666M666IatGatT55B.1.4280.005102
ORF1ab/nsp12666M666IatGatA35B.1.6370.000219
ORF1ab/nsp12666M666IatGatT25B.1.6370.000146
ORF1ab/nsp12666M666IatGatT44A.10.001127
ORF1ab/nsp12666M666IatGatT34B.1.3510.000089
ORF1ab/nsp12666M666IatGatA14B.1.3510.00003
ORF1ab/nsp12666M666IatGatA24B.1.360.000292
ORF1ab/nsp12666M666IatGatT24B.1.360.000292
ORF1ab/nsp12666M666IatGatT44B.1.36.170.001976
ORF1ab/nsp12666M666IatGatT44B.1.3960.002823
ORF1ab/nsp12666M666IatGatT44B.1.5950.001044
ORF1ab/nsp12666M666IatGatA13AY.1170.000085
ORF1ab/nsp12666M666IatGatT13AY.1170.000085
ORF1ab/nsp12666M666IatGatC13AY.1170.000085
ORF1ab/nsp12666M666IatGatT33AY.1180.000188
ORF1ab/nsp12666M666IatGatT33AY.340.000291
ORF1ab/nsp12666M666IatGatT33AY.460.000312
ORF1ab/nsp12666M666IatGatA33B.1.1.2040.009119
ORF1ab/nsp12666M666IatGatA23B.1.1.370.000386
ORF1ab/nsp12666M666IatGatT13B.1.1.370.000193
ORF1ab/nsp12666M666IatGatT33B.1.177.440.001557
ORF1ab/nsp12666M666IatGatT33B.1.2350.007557
ORF1ab/nsp12666M666IatGatT33B.1.3620.004622
ORF1ab/nsp12666M666IatGatT23B.1.5960.000174
ORF1ab/nsp12666M666IatGatA13B.1.5960.000087
ORF1ab/nsp12666M666IatGatT33D.20.000225
ORF1ab/nsp12666M666IatGatT23P.10.000032
ORF1ab/nsp12666M666IatGatA13P.10.000016
ORF1ab/nsp12666M666IatGatT22A.23.10.001408
ORF1ab/nsp12666M666IatGatA22AY.1190.000071
ORF1ab/nsp12666M666IatGatT22AY.1200.000074
ORF1ab/nsp12666M666IatGatT12AY.1210.000135
ORF1ab/nsp12666M666IatGatA12AY.1210.000135
ORF1ab/nsp12666M666IatGatT22AY.260.000057
ORF1ab/nsp12666M666IatGatA22AY.3.10.000171
ORF1ab/nsp12666M666IatGatT22AY.390.000049
ORF1ab/nsp12666M666IatGatT22AY.450.000243
ORF1ab/nsp12666M666IatGatA12AY.470.000031
ORF1ab/nsp12666M666IatGatT12AY.470.000031
ORF1ab/nsp12666M666IatGatT22AY.99.10.003106
ORF1ab/nsp12666M666IatGatT12AY.99.20.000092
ORF1ab/nsp12666M666IatGatA12AY.99.20.000092
ORF1ab/nsp12666M666IatGatT22B.1.1.10.000653
ORF1ab/nsp12666M666IatGatT22B.1.1.1150.017857
ORF1ab/nsp12666M666IatGatT22B.1.1.1440.057143
ORF1ab/nsp12666M666IatGatT22B.1.1150.043478
ORF1ab/nsp12666M666IatGatT22B.1.177.870.001456
ORF1ab/nsp12666M666IatGatT22B.1.258.30.00335
ORF1ab/nsp12666M666IatGatT22B.1.351.20.000605
ORF1ab/nsp12666M666IatGatT22B.1.3610.002577
ORF1ab/nsp12666M666IatGatT22B.1.438.10.000215
ORF1ab/nsp12666M666IatGatA22B.1.5380.016129
ORF1ab/nsp12666M666IatGatT22B.1.5820.000981
ORF1ab/nsp12666M666IatGatT22B.1.6090.000959
ORF1ab/nsp12666M666IatGatT22B.1.617.10.000258
ORF1ab/nsp12666M666IatGatA22C.360.001821
ORF1ab/nsp12666M666IatGatT11A0.000387
ORF1ab/nsp12666M666IatGatA11A.2.40.003367
ORF1ab/nsp12666M666IatGatA11AY.1040.001984
ORF1ab/nsp12666M666IatGatA11AY.1050.000643
ORF1ab/nsp12666M666IatGatT11AY.1160.000287
ORF1ab/nsp12666M666IatGatT11AY.120.10.000321
ORF1ab/nsp12666M666IatGatT11AY.130.000161
ORF1ab/nsp12666M666IatGatT11AY.170.008197
ORF1ab/nsp12666M666IatGatA11AY.23.10.000417
ORF1ab/nsp12666M666IatGatT11AY.240.000431
ORF1ab/nsp12666M666IatGatT11AY.270.000065
ORF1ab/nsp12666M666IatGatT11AY.29.10.000221
ORF1ab/nsp12666M666IatGatT11AY.300.000396
ORF1ab/nsp12666M666IatGatT11AY.330.000067
ORF1ab/nsp12666M666IatGatA11AY.360.000148
ORF1ab/nsp12666M666IatGatT11AY.39.10.00004
ORF1ab/nsp12666M666IatGatT11AY.420.00004
ORF1ab/nsp12666M666IatGatT11AY.570.000656
ORF1ab/nsp12666M666IatGatT11AY.640.000595
ORF1ab/nsp12666M666IatGatT11AY.920.000287
ORF1ab/nsp12666M666IatGatT11AY.930.000273
ORF1ab/nsp12666M666IatGatT11AY.98.10.000048
ORF1ab/nsp12666M666IatGatC11B.1.1.1380.006061
ORF1ab/nsp12666M666IatGatT11B.1.1.150.013514
ORF1ab/nsp12666M666IatGatA11B.1.1.1570.000913
ORF1ab/nsp12666M666IatGatT11B.1.1.1610.003534
ORF1ab/nsp12666M666IatGatT11B.1.1.1940.00495
ORF1ab/nsp12666M666IatGatT11B.1.1.2140.000055
ORF1ab/nsp12666M666IatGatT11B.1.1.2220.000204
ORF1ab/nsp12666M666IatGatT11B.1.1.2430.004082
ORF1ab/nsp12666M666IatGatT11B.1.1.3160.000925
ORF1ab/nsp12666M666IatGatT11B.1.1.330.000421
ORF1ab/nsp12666M666IatGatT11B.1.1.3720.000689
ORF1ab/nsp12666M666IatGatT11B.1.1.3750.011905
ORF1ab/nsp12666M666IatGatT11B.1.1.3760.005952
ORF1ab/nsp12666M666IatGatA11B.1.1.3970.002252
ORF1ab/nsp12666M666IatGatT11B.1.1.4320.001266
ORF1ab/nsp12666M666IatGatT11B.1.1.4340.000349
ORF1ab/nsp12666M666IatGatT11B.1.1.4480.002033
ORF1ab/nsp12666M666IatGatT11B.1.1.5230.001563
ORF1ab/nsp12666M666IatGatT11B.1.1.890.006061
ORF1ab/nsp12666M666IatGatT11B.1.110.30.000718
ORF1ab/nsp12666M666IatGatT11B.1.1570.002985
ORF1ab/nsp12666M666IatGatT11B.1.177.600.000218
ORF1ab/nsp12666M666IatGatT11B.1.177.720.00339
ORF1ab/nsp12666M666IatGatT11B.1.177.730.000566
ORF1ab/nsp12666M666IatGatT11B.1.214.20.0006
ORF1ab/nsp12666M666IatGatA11B.1.2210.000071
ORF1ab/nsp12666M666IatGatT11B.1.221.20.004016
ORF1ab/nsp12666M666IatGatT11B.1.2600.003344
ORF1ab/nsp12666M666IatGatT11B.1.3050.002151
ORF1ab/nsp12666M666IatGatA11B.1.3330.010526
ORF1ab/nsp12666M666IatGatT11B.1.36.100.004785
ORF1ab/nsp12666M666IatGatA11B.1.36.160.001425
ORF1ab/nsp12666M666IatGatT11B.1.36.250.002208
ORF1ab/nsp12666M666IatGatA11B.1.36.290.000517
ORF1ab/nsp12666M666IatGatT11B.1.3670.000792
ORF1ab/nsp12666M666IatGatT11B.1.3690.000285
ORF1ab/nsp12666M666IatGatT11B.1.4590.004082
ORF1ab/nsp12666M666IatGatT11B.1.4700.001404
ORF1ab/nsp12666M666IatGatT11B.1.5510.00129
ORF1ab/nsp12666M666IatGatT11B.1.5880.00091
ORF1ab/nsp12666M666IatGatT11B.1.617.30.002985
ORF1ab/nsp12666M666IatGatC11B.1.6210.000089
ORF1ab/nsp12666M666IatGatA11B.1.9.50.005682
ORF1ab/nsp12666M666IatGatT11B.30.000831
ORF1ab/nsp12666M666IatGatT11C.300.001727
ORF1ab/nsp12666M666IatGatA11C.370.000116
ORF1ab/nsp12666M666IatGatT11C.390.018868
ORF1ab/nsp12666M666IatGatT11P.1.120.000484
ORF1ab/nsp12666M666IatGatC11P.1.140.000048
ORF1ab/nsp12666M666IatGatT11P.1.160.000374
ORF1ab/nsp12666M666IatGatT11P.20.000187