CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = L401P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12401L401PL4793PnonsyncTtcCt860.7514641-14643
ORF1ab/nsp12401L401PL4793PnonsyncTTcCC820.2514641-14643

Details of the mutation L401P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12401L401PcTtcCt68All0.000001
ORF1ab/nsp12401L401PcTTcCC28All0
ORF1ab/nsp12401L401PcTtcCt33B.1.1.70.000003
ORF1ab/nsp12401L401PcTTcCC12B.10.000009
ORF1ab/nsp12401L401PcTtcCt12B.10.000009
ORF1ab/nsp12401L401PcTTcCC11AY.440.000006
ORF1ab/nsp12401L401PcTtcCt11B.1.1770.000013
ORF1ab/nsp12401L401PcTtcCt11B.1.617.20.000004