CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = L261X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12261L261XL4653XnonsyntTatGa5835800.99485414221-14223
ORF1ab/nsp12261L261XL4653XnonsyntTatAa58330.005145814221-14223

Details of the mutation L261X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12261L261XtTatGa580583All0.000111
ORF1ab/nsp12261L261XtTatAa3583All0.000001
ORF1ab/nsp12261L261XtTatGa113113C.10.270335
ORF1ab/nsp12261L261XtTatGa9898B.1.1.4480.199187
ORF1ab/nsp12261L261XtTatGa9191B.10.000834
ORF1ab/nsp12261L261XtTatGa7474B.1.3510.0022
ORF1ab/nsp12261L261XtTatGa7070B.1.1.520.853659
ORF1ab/nsp12261L261XtTatGa1919B.1.3810.148438
ORF1ab/nsp12261L261XtTatGa1616B.1.1.540.048338
ORF1ab/nsp12261L261XtTatGa1515B.1.1.530.205479
ORF1ab/nsp12261L261XtTatGa1212B.1.1.1170.116505
ORF1ab/nsp12261L261XtTatGa1010B.1.10.000181
ORF1ab/nsp12261L261XtTatGa88B.1.1.570.091954
ORF1ab/nsp12261L261XtTatGa88C.20.129032
ORF1ab/nsp12261L261XtTatGa77B.1.1.10.002287
ORF1ab/nsp12261L261XtTatGa44B.1.1.3720.002755
ORF1ab/nsp12261L261XtTatGa44B.1.1.3860.266667
ORF1ab/nsp12261L261XtTatGa44B.1.1.4590.061538
ORF1ab/nsp12261L261XtTatGa33B.1.1.340.039474
ORF1ab/nsp12261L261XtTatGa22A0.000774
ORF1ab/nsp12261L261XtTatGa22B.1.1.2910.001485
ORF1ab/nsp12261L261XtTatGa22B.1.1.5070.017391
ORF1ab/nsp12261L261XtTatGa22B.1.1.620.054054
ORF1ab/nsp12261L261XtTatGa22B.1.1780.047619
ORF1ab/nsp12261L261XtTatGa22B.1.3710.002245
ORF1ab/nsp12261L261XtTatAa22B.1.617.20.000008
ORF1ab/nsp12261L261XtTatGa22C.90.060606
ORF1ab/nsp12261L261XtTatAa11AY.540.000095
ORF1ab/nsp12261L261XtTatGa11B.1.1.2530.002506
ORF1ab/nsp12261L261XtTatGa11B.1.1.2540.011236
ORF1ab/nsp12261L261XtTatGa11B.1.1.2730.006757
ORF1ab/nsp12261L261XtTatGa11B.1.1.280.000311
ORF1ab/nsp12261L261XtTatGa11B.1.1.4120.007634
ORF1ab/nsp12261L261XtTatGa11B.1.20.000009
ORF1ab/nsp12261L261XtTatGa11B.1.2400.000216
ORF1ab/nsp12261L261XtTatGa11B.1.2430.00007
ORF1ab/nsp12261L261XtTatGa11B.60.00091
ORF1ab/nsp12261L261XtTatGa11C.60.037037