CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 91 | K91R | K4483R | nonsyn | aAg | aGg | 13853 | 13851 | 0.999856 | 13711-13713 |
ORF1ab/nsp12 | 91 | K91R | K4483R | nonsyn | aAG | aGA | 13853 | 2 | 0.000144373 | 13711-13713 |
Details of the mutation K91R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 13851 | 13853 | All | 0.002649 |
ORF1ab/nsp12 | 91 | K91R | aAG | aGA | 2 | 13853 | All | 0 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2876 | 2876 | B.1.617.2 | 0.010829 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2781 | 2781 | AY.41 | 0.81746 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1459 | 1459 | AY.103 | 0.009059 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1237 | 1237 | B.1.1.7 | 0.001107 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 481 | 481 | AY.4 | 0.000749 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 460 | 460 | AY.44 | 0.0028 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 404 | 404 | B.1.625 | 0.950588 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 370 | 370 | AY.42 | 0.014885 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 356 | 356 | B.1.177 | 0.004688 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 204 | 204 | AY.3 | 0.002029 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 186 | 186 | AY.33 | 0.012421 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 170 | 170 | P.1 | 0.002678 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 136 | 136 | AY.25 | 0.000818 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 133 | 133 | AY.43 | 0.000589 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 126 | 126 | AY.6 | 0.005182 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 124 | 124 | B.1.2 | 0.001092 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 110 | 110 | AY.102 | 0.002917 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 106 | 106 | B.1 | 0.000971 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 93 | 93 | B.1.1.214 | 0.005157 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 81 | 81 | B.1.258.17 | 0.008422 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 75 | 75 | AY.118 | 0.004699 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 67 | 67 | B.1.1 | 0.001215 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 66 | 66 | B.1.1.189 | 0.099849 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 63 | 63 | B.1.429 | 0.001482 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 61 | 61 | B.1.526 | 0.001434 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 57 | 57 | B.1.1.222 | 0.011628 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 53 | 53 | AY.9 | 0.003583 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 52 | 52 | AY.26 | 0.001472 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 48 | 48 | AY.39 | 0.001186 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 48 | 48 | B.1.1.519 | 0.001906 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 46 | 46 | AY.29 | 0.000726 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 46 | 46 | AY.47 | 0.001431 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 42 | 42 | AY.120 | 0.001562 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 41 | 41 | C.37 | 0.004759 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 34 | 34 | AY.98 | 0.002686 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 34 | 34 | K.1 | 0.809524 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 33 | 33 | AY.119 | 0.001165 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 33 | 33 | B.1.240.2 | 1 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 28 | 28 | AY.5 | 0.000578 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 28 | 28 | AY.57 | 0.018373 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 27 | 27 | B.1.351 | 0.000803 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 25 | 25 | AY.46.6 | 0.001805 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 23 | 23 | B.1.1.258 | 0.074919 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 22 | 22 | B.1.596 | 0.001917 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 21 | 21 | AY.98.1 | 0.001017 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 20 | 20 | AY.13 | 0.00322 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 20 | 20 | B.1.258 | 0.001331 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 19 | 19 | AY.46.4 | 0.003126 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 18 | 18 | AY.37 | 0.005689 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 17 | 17 | B.1.466.2 | 0.006651 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 16 | 16 | AY.61 | 0.001676 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 16 | 16 | B.1.177.36 | 0.258065 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 16 | 16 | B.1.177.60 | 0.003495 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 15 | 15 | AY.20 | 0.000583 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 15 | 15 | AY.45 | 0.001825 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 14 | 14 | AY.116 | 0.004015 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 13 | 13 | AY.4.2 | 0.000282 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 13 | 13 | B.1.1.33 | 0.005471 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 13 | 13 | B.1.177.8 | 0.009782 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 12 | 12 | AY.100 | 0.000552 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 12 | 12 | AY.121 | 0.001624 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 12 | 12 | B.1.177.4 | 0.002533 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 12 | 12 | B.1.36.1 | 0.013683 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 12 | 12 | B.1.637 | 0.000877 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 11 | 11 | AY.23 | 0.000767 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 11 | 11 | AY.39.1 | 0.000436 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 11 | 11 | AY.46 | 0.001145 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 11 | 11 | B.1.438.1 | 0.00118 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 11 | 11 | Q.1 | 0.00139 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 10 | 10 | B.1.1.434 | 0.003486 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 10 | 10 | B.1.128 | 0.006353 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 10 | 10 | B.1.243 | 0.000696 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 10 | 10 | C.36.3 | 0.005672 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 9 | 9 | B.1.1.525 | 0.04918 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 9 | 9 | B.1.36 | 0.001313 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 9 | 9 | B.1.617.1 | 0.001161 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 9 | 9 | N.5 | 0.015901 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 8 | 8 | AY.111 | 0.001465 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 8 | 8 | AY.27 | 0.000518 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 8 | 8 | B.1.619 | 0.006969 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 7 | 7 | AY.12 | 0.002212 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 7 | 7 | AY.2 | 0.002493 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 7 | 7 | AY.5.3 | 0.002362 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 7 | 7 | AY.9.2 | 0.000257 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 7 | 7 | AY.99.2 | 0.000645 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 7 | 7 | B.1.1.63 | 0.002701 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 7 | 7 | B.1.525 | 0.000792 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 6 | 6 | AY.117 | 0.000507 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 6 | 6 | AY.46.3 | 0.005602 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 6 | 6 | B.1.177.85 | 0.032609 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 6 | 6 | B.1.311 | 0.001647 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 6 | 6 | B.1.628 | 0.002114 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.22 | 0.01046 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.38 | 0.002496 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.5.4 | 0.001384 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.54 | 0.000477 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.70 | 0.001043 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.75 | 0.00028 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.77 | 0.005637 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.84 | 0.002187 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | AY.91 | 0.003652 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 5 | 5 | B.1.1.25 | 0.002843 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | A.1 | 0.001127 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | AY.107 | 0.001864 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | AY.109 | 0.002959 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | AY.32 | 0.00213 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | AY.34.1 | 0.00204 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | AY.39.2 | 0.006163 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | AY.9.1 | 0.000335 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | B.1.1.1 | 0.001307 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | B.1.1.306 | 0.001754 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | B.1.1.317 | 0.001647 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | B.1.160 | 0.000125 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | B.1.36.18 | 0.001681 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 4 | B.1.427 | 0.000101 |
ORF1ab/nsp12 | 91 | K91R | aAG | aGA | 2 | 4 | B.1.427 | 0.000101 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | C.37.1 | 0.010471 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | P.1.1 | 0.001271 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 4 | 4 | P.1.17 | 0.000647 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | A.2.5 | 0.001497 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | AY.106 | 0.001005 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | AY.108 | 0.003308 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | AY.46.2 | 0.001906 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | AY.60 | 0.002814 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | AY.7.1 | 0.000338 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | B.1.1.464 | 0.004418 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | B.1.177.19 | 0.004292 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | B.1.177.40 | 0.015464 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | B.1.456 | 0.009804 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | B.1.627 | 0.006061 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | P.1.7 | 0.000958 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 3 | 3 | Q.3 | 0.000435 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.116.1 | 0.000623 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.19 | 0.002281 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.5.1 | 0.007519 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.68 | 0.000547 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B | 0.000256 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.1.134 | 0.022727 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.1.180 | 0.021505 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.1.333 | 0.002153 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.1.526 | 0.007092 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.13 | 0.004751 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.139 | 0.001466 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.177.43 | 0.002954 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.177.77 | 0.001452 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.258.24 | 0.021505 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.36.24 | 0.012346 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.408 | 0.00738 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.426 | 0.002018 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.433 | 0.00639 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.562 | 0.037037 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | B.1.634 | 0.006849 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | C.1.2 | 0.008511 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | P.1.13 | 0.001797 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | A.2.5.1 | 0.004808 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.115 | 0.005208 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.5.2 | 0.002463 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.101 | 0.01 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.204 | 0.00304 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.290 | 0.018182 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.336 | 0.016667 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.1.528 | 0.004808 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.166 | 0.008475 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.177.20 | 0.001517 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.177.24 | 0.001295 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.258.10 | 0.011364 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.36.21 | 0.00216 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.36.33 | 0.007576 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.36.37 | 0.002778 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.402 | 0.009804 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.415 | 0.014286 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.505 | 0.004386 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.1.91 | 0.002075 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | C.36.1 | 0.004149 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp12 | 91 | K91R | aAg | aGg | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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