CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = H75N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1275H75NH4467NnonsynCacAac105990.94285713663-13665
ORF1ab/nsp1275H75NH4467NnonsynCaCAaT10560.057142913663-13665

Details of the mutation H75N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1275H75NCacAac99105All0.000019
ORF1ab/nsp1275H75NCaCAaT6105All0.000001
ORF1ab/nsp1275H75NCacAac1217B.10.00011
ORF1ab/nsp1275H75NCaCAaT517B.10.000046
ORF1ab/nsp1275H75NCacAac1414AY.40.000022
ORF1ab/nsp1275H75NCacAac1414B.1.4290.000329
ORF1ab/nsp1275H75NCacAac1414B.1.6370.001023
ORF1ab/nsp1275H75NCacAac77AY.50.000145
ORF1ab/nsp1275H75NCacAac66B.1.1.70.000005
ORF1ab/nsp1275H75NCacAac55AY.30.00005
ORF1ab/nsp1275H75NCacAac55B.1.617.20.000019
ORF1ab/nsp1275H75NCacAac33AY.1020.00008
ORF1ab/nsp1275H75NCacAac120.055556
ORF1ab/nsp1275H75NCaCAaT120.055556
ORF1ab/nsp1275H75NCacAac22AY.1200.000074
ORF1ab/nsp1275H75NCacAac22AY.430.000009
ORF1ab/nsp1275H75NCacAac22B.1.1.5190.000079
ORF1ab/nsp1275H75NCacAac11AY.240.000431
ORF1ab/nsp1275H75NCacAac11AY.250.000006
ORF1ab/nsp1275H75NCacAac11AY.46.60.000072
ORF1ab/nsp1275H75NCacAac11AY.60.000041
ORF1ab/nsp1275H75NCacAac11B.1.10.000018
ORF1ab/nsp1275H75NCacAac11B.1.1.10.000327
ORF1ab/nsp1275H75NCacAac11B.1.1.370.000193
ORF1ab/nsp1275H75NCacAac11B.1.177.330.001645
ORF1ab/nsp1275H75NCacAac11B.1.177.810.000189
ORF1ab/nsp1275H75NCacAac11B.1.2580.000067
ORF1ab/nsp1275H75NCacAac11B.1.3690.000285
ORF1ab/nsp1275H75NCacAac11C.350.000774