CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = H599L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12599H599LH4991LnonsynCACTTA36230.63888915235-15237
ORF1ab/nsp12599H599LH4991LnonsyncAccTc3670.19444415235-15237
ORF1ab/nsp12599H599LH4991LnonsyncACcTA3650.13888915235-15237
ORF1ab/nsp12599H599LH4991LnonsyncACcTT3610.027777815235-15237

Details of the mutation H599L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12599H599LCACTTA2336All0.000004
ORF1ab/nsp12599H599LcAccTc736All0.000001
ORF1ab/nsp12599H599LcACcTA536All0.000001
ORF1ab/nsp12599H599LcACcTT136All0
ORF1ab/nsp12599H599LCACTTA2029B.1.1.70.000018
ORF1ab/nsp12599H599LcAccTc529B.1.1.70.000004
ORF1ab/nsp12599H599LcACcTA429B.1.1.70.000004
ORF1ab/nsp12599H599LcAccTc12B.1.10.000018
ORF1ab/nsp12599H599LCACTTA12B.1.10.000018
ORF1ab/nsp12599H599LcACcTT12B.1.5760.000907
ORF1ab/nsp12599H599LcACcTA12B.1.5760.000907
ORF1ab/nsp12599H599LCACTTA11AY.250.000006
ORF1ab/nsp12599H599LCACTTA11P.10.000016
ORF1ab/nsp12599H599LcAccTc11P.1.120.000484