CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = H599I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12599H599IH4991InonsynCACATA61310.50819715235-15237
ORF1ab/nsp12599H599IH4991InonsynCAcATc61240.39344315235-15237
ORF1ab/nsp12599H599IH4991InonsynCACATT6160.098360715235-15237

Details of the mutation H599I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12599H599ICACATA3161All0.000006
ORF1ab/nsp12599H599ICAcATc2461All0.000005
ORF1ab/nsp12599H599ICACATT661All0.000001
ORF1ab/nsp12599H599ICACATA2752B.1.1.70.000024
ORF1ab/nsp12599H599ICAcATc2152B.1.1.70.000019
ORF1ab/nsp12599H599ICACATT452B.1.1.70.000004
ORF1ab/nsp12599H599ICAcATc13P.10.000016
ORF1ab/nsp12599H599ICACATA13P.10.000016
ORF1ab/nsp12599H599ICACATT13P.10.000016
ORF1ab/nsp12599H599ICAcATc12AY.250.000006
ORF1ab/nsp12599H599ICACATA12AY.250.000006
ORF1ab/nsp12599H599ICAcATc12B.1.10.000018
ORF1ab/nsp12599H599ICACATA12B.1.10.000018
ORF1ab/nsp12599H599ICACATA12B.1.5760.000907
ORF1ab/nsp12599H599ICACATT12B.1.5760.000907