CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = H381R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12381H381RH4773RnonsyncAccGc1570.46666714581-14583
ORF1ab/nsp12381H381RH4773RnonsyncACcGG1520.13333314581-14583
ORF1ab/nsp12381H381RH4773RnonsyncACcGT1520.13333314581-14583
ORF1ab/nsp12381H381RH4773RnonsyncACcGA1520.13333314581-14583
ORF1ab/nsp12381H381RH4773RnonsynCACAGA1510.066666714581-14583
ORF1ab/nsp12381H381RH4773RnonsynCACAGG1510.066666714581-14583

Details of the mutation H381R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12381H381RcAccGc715All0.000001
ORF1ab/nsp12381H381RcACcGG215All0
ORF1ab/nsp12381H381RcACcGT215All0
ORF1ab/nsp12381H381RcACcGA215All0
ORF1ab/nsp12381H381RCACAGG115All0
ORF1ab/nsp12381H381RCACAGA115All0
ORF1ab/nsp12381H381RcAccGc39B.10.000027
ORF1ab/nsp12381H381RcACcGG29B.10.000018
ORF1ab/nsp12381H381RcACcGT19B.10.000009
ORF1ab/nsp12381H381RCACAGA19B.10.000009
ORF1ab/nsp12381H381RCACAGG19B.10.000009
ORF1ab/nsp12381H381RcACcGA19B.10.000009
ORF1ab/nsp12381H381RcACcGT13B.1.5250.000113
ORF1ab/nsp12381H381RcAccGc13B.1.5250.000113
ORF1ab/nsp12381H381RcACcGA13B.1.5250.000113
ORF1ab/nsp12381H381RcAccGc11AY.1190.000035
ORF1ab/nsp12381H381RcAccGc11AY.250.000006
ORF1ab/nsp12381H381RcAccGc11B.1.1.3180.000302