CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = G345del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12345G345del2G4737del2delGGa--a1160.54545514473-14475
ORF1ab/nsp12345G345del2G4737del2delgGAg--1150.45454514473-14475

Details of the mutation G345del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12345G345del2GGa--a611All0.000001
ORF1ab/nsp12345G345del2gGAg--511All0.000001
ORF1ab/nsp12345G345del2GGa--a23B.10.000018
ORF1ab/nsp12345G345del2gGAg--13B.10.000009
ORF1ab/nsp12345G345del2gGAg--22B.1.1.70.000002
ORF1ab/nsp12345G345del2GGa--a22B.1.1770.000026
ORF1ab/nsp12345G345del2GGa--a11AY.1170.000085
ORF1ab/nsp12345G345del2GGa--a11AY.430.000004
ORF1ab/nsp12345G345del2gGAg--11AY.650.000533
ORF1ab/nsp12345G345del2gGAg--11B.1.10.000018