CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = F192L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12192F192LF4584LnonsynTtcCtc3643330.91483514014-14016
ORF1ab/nsp12192F192LF4584LnonsynttCttA364240.065934114014-14016
ORF1ab/nsp12192F192LF4584LnonsynttCttG36460.016483514014-14016
ORF1ab/nsp12192F192LF4584LnonsynTtCCtT36410.0027472514014-14016

Details of the mutation F192L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12192F192LTtcCtc333364All0.000064
ORF1ab/nsp12192F192LttCttA24364All0.000005
ORF1ab/nsp12192F192LttCttG6364All0.000001
ORF1ab/nsp12192F192LTtCCtT1364All0
ORF1ab/nsp12192F192LTtcCtc111111AY.7.10.01251
ORF1ab/nsp12192F192LTtcCtc9699AY.40.000149
ORF1ab/nsp12192F192LttCttA299AY.40.000003
ORF1ab/nsp12192F192LttCttG199AY.40.000002
ORF1ab/nsp12192F192LTtcCtc2630B.1.1.70.000023
ORF1ab/nsp12192F192LttCttA330B.1.1.70.000003
ORF1ab/nsp12192F192LTtCCtT130B.1.1.70.000001
ORF1ab/nsp12192F192LTtcCtc2224B.1.20.000194
ORF1ab/nsp12192F192LttCttG124B.1.20.000009
ORF1ab/nsp12192F192LttCttA124B.1.20.000009
ORF1ab/nsp12192F192LTtcCtc1313B.1.1770.000171
ORF1ab/nsp12192F192LTtcCtc1111B.1.1.500.007468
ORF1ab/nsp12192F192LttCttA48B.10.000037
ORF1ab/nsp12192F192LttCttG28B.10.000018
ORF1ab/nsp12192F192LTtcCtc28B.10.000018
ORF1ab/nsp12192F192LTtcCtc66AY.290.000095
ORF1ab/nsp12192F192LTtcCtc66B.1.3510.000178
ORF1ab/nsp12192F192LTtcCtc45AY.1020.000106
ORF1ab/nsp12192F192LttCttA15AY.1020.000027
ORF1ab/nsp12192F192LTtcCtc45B.1.617.20.000015
ORF1ab/nsp12192F192LttCttA15B.1.617.20.000004
ORF1ab/nsp12192F192LTtcCtc44AY.1000.000184
ORF1ab/nsp12192F192LttCttA23AY.440.000012
ORF1ab/nsp12192F192LTtcCtc13AY.440.000006
ORF1ab/nsp12192F192LTtcCtc33B.1.6280.001057
ORF1ab/nsp12192F192LTtcCtc33P.1.170.000485
ORF1ab/nsp12192F192LTtcCtc22AY.390.000049
ORF1ab/nsp12192F192LttCttA22AY.430.000009
ORF1ab/nsp12192F192LTtcCtc12B0.000128
ORF1ab/nsp12192F192LttCttA12B0.000128
ORF1ab/nsp12192F192LTtcCtc22N.90.011905
ORF1ab/nsp12192F192LttCttA11A0.000387
ORF1ab/nsp12192F192LTtcCtc11AY.1180.000063
ORF1ab/nsp12192F192LTtcCtc11AY.1190.000035
ORF1ab/nsp12192F192LttCttA11AY.1200.000037
ORF1ab/nsp12192F192LTtcCtc11AY.260.000028
ORF1ab/nsp12192F192LTtcCtc11AY.4.50.000107
ORF1ab/nsp12192F192LTtcCtc11AY.470.000031
ORF1ab/nsp12192F192LttCttA11AY.50.000021
ORF1ab/nsp12192F192LTtcCtc11AY.60.000041
ORF1ab/nsp12192F192LTtcCtc11AY.640.000595
ORF1ab/nsp12192F192LTtcCtc11AY.90.000068
ORF1ab/nsp12192F192LTtcCtc11B.1.10.000018
ORF1ab/nsp12192F192LTtcCtc11B.1.177.160.000664
ORF1ab/nsp12192F192LTtcCtc11B.1.177.600.000218
ORF1ab/nsp12192F192LTtcCtc11B.1.2050.02381
ORF1ab/nsp12192F192LttCttA11B.1.3010.005917
ORF1ab/nsp12192F192LTtcCtc11B.1.4270.00005
ORF1ab/nsp12192F192LttCttG11B.1.5710.009709
ORF1ab/nsp12192F192LttCttA11B.1.5960.000087
ORF1ab/nsp12192F192LttCttG11B.1.617.30.002985
ORF1ab/nsp12192F192LTtcCtc11B.1.6210.000089
ORF1ab/nsp12192F192LttCttA11B.1.6230.000536
ORF1ab/nsp12192F192LttCttA11B.6.60.000889
ORF1ab/nsp12192F192LTtcCtc11P.1.120.000484
ORF1ab/nsp12192F192LTtcCtc11Q.40.000455