CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = E436D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12436E436DE4828DnonsyngaAgaC81560.69135814746-14748
ORF1ab/nsp12436E436DE4828DnonsyngaAgaT81250.30864214746-14748

Details of the mutation E436D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12436E436DgaAgaC5681All0.000011
ORF1ab/nsp12436E436DgaAgaT2581All0.000005
ORF1ab/nsp12436E436DgaAgaC2930B.1.1.70.000026
ORF1ab/nsp12436E436DgaAgaT130B.1.1.70.000001
ORF1ab/nsp12436E436DgaAgaT1111B.1.2210.000781
ORF1ab/nsp12436E436DgaAgaC55B.1.617.20.000019
ORF1ab/nsp12436E436DgaAgaC33AY.1030.000019
ORF1ab/nsp12436E436DgaAgaC33AY.5.40.00083
ORF1ab/nsp12436E436DgaAgaT23B.10.000018
ORF1ab/nsp12436E436DgaAgaC13B.10.000009
ORF1ab/nsp12436E436DgaAgaC33B.1.1600.000094
ORF1ab/nsp12436E436DgaAgaC22AY.1020.000053
ORF1ab/nsp12436E436DgaAgaC22AY.620.000871
ORF1ab/nsp12436E436DgaAgaC22B.1.5580.009132
ORF1ab/nsp12436E436DgaAgaC11AY.120.000316
ORF1ab/nsp12436E436DgaAgaT11AY.30.00001
ORF1ab/nsp12436E436DgaAgaT11AY.4.50.000107
ORF1ab/nsp12436E436DgaAgaC11AY.410.000294
ORF1ab/nsp12436E436DgaAgaT11AY.440.000006
ORF1ab/nsp12436E436DgaAgaC11AY.50.000021
ORF1ab/nsp12436E436DgaAgaC11AY.60.000041
ORF1ab/nsp12436E436DgaAgaT11AY.750.000056
ORF1ab/nsp12436E436DgaAgaT11B.1.1.2840.000107
ORF1ab/nsp12436E436DgaAgaT11B.1.177.230.003236
ORF1ab/nsp12436E436DgaAgaT11B.1.20.000009
ORF1ab/nsp12436E436DgaAgaT11B.1.2360.002053
ORF1ab/nsp12436E436DgaAgaT11B.1.258.170.000104
ORF1ab/nsp12436E436DgaAgaT11B.1.3510.00003
ORF1ab/nsp12436E436DgaAgaC11B.1.5250.000113
ORF1ab/nsp12436E436DgaAgaT11B.1.619.10.000641
ORF1ab/nsp12436E436DgaAgaC11B.4.40.018868