CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = D879del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12879D879del1D5271del1delgaTga-650.83333316075-16077
ORF1ab/nsp12879D879del1D5271del1delGat-at610.16666716075-16077

Details of the mutation D879del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12879D879del1gaTga-56All0.000001
ORF1ab/nsp12879D879del1Gat-at16All0
ORF1ab/nsp12879D879del1gaTga-22AY.250.000012
ORF1ab/nsp12879D879del1gaTga-22AY.430.000009
ORF1ab/nsp12879D879del1gaTga-11AY.290.000016
ORF1ab/nsp12879D879del1Gat-at11B.310.003731