CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = D499del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12499D499delD4891deldelGAC---3939114935-14937

Details of the mutation D499del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12499D499delGAC---3939All0.000007
ORF1ab/nsp12499D499delGAC---1010B.1.1.70.000009
ORF1ab/nsp12499D499delGAC---33B.1.10.000054
ORF1ab/nsp12499D499delGAC---22P.10.000032
ORF1ab/nsp12499D499delGAC---11AY.1070.000466
ORF1ab/nsp12499D499delGAC---11AY.250.000006
ORF1ab/nsp12499D499delGAC---11AY.30.00001
ORF1ab/nsp12499D499delGAC---11AY.350.000233
ORF1ab/nsp12499D499delGAC---11AY.380.000499
ORF1ab/nsp12499D499delGAC---11AY.4.50.000107
ORF1ab/nsp12499D499delGAC---11AY.420.00004
ORF1ab/nsp12499D499delGAC---11AY.430.000004
ORF1ab/nsp12499D499delGAC---11AY.440.000006
ORF1ab/nsp12499D499delGAC---11AY.460.000104
ORF1ab/nsp12499D499delGAC---11AY.990.001049
ORF1ab/nsp12499D499delGAC---11AY.99.10.001553
ORF1ab/nsp12499D499delGAC---11B.10.000009
ORF1ab/nsp12499D499delGAC---11B.1.1.1590.004673
ORF1ab/nsp12499D499delGAC---11B.1.1.250.000569
ORF1ab/nsp12499D499delGAC---11B.1.1.3060.000438
ORF1ab/nsp12499D499delGAC---11B.1.160.230.004831
ORF1ab/nsp12499D499delGAC---11B.1.1770.000013
ORF1ab/nsp12499D499delGAC---11B.1.177.680.015152
ORF1ab/nsp12499D499delGAC---11B.1.177.760.002494
ORF1ab/nsp12499D499delGAC---11B.1.2580.000067
ORF1ab/nsp12499D499delGAC---11B.130.045455
ORF1ab/nsp12499D499delGAC---11C.360.000911
ORF1ab/nsp12499D499delGAC---11P.1.40.000977