CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = D260Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12260D260YD4652YnonsynGacTac5252114218-14220

Details of the mutation D260Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12260D260YGacTac5252All0.00001
ORF1ab/nsp12260D260YGacTac66AY.40.000009
ORF1ab/nsp12260D260YGacTac55B.10.000046
ORF1ab/nsp12260D260YGacTac44AY.250.000024
ORF1ab/nsp12260D260YGacTac44B.1.1.70.000004
ORF1ab/nsp12260D260YGacTac44B.1.617.20.000015
ORF1ab/nsp12260D260YGacTac33AY.420.000121
ORF1ab/nsp12260D260YGacTac33AY.430.000013
ORF1ab/nsp12260D260YGacTac22AY.690.000373
ORF1ab/nsp12260D260YGacTac22B.1.177.40.000422
ORF1ab/nsp12260D260YGacTac22P.1.140.000096
ORF1ab/nsp12260D260YGacTac110.055556
ORF1ab/nsp12260D260YGacTac11A0.000387
ORF1ab/nsp12260D260YGacTac11AY.1000.000046
ORF1ab/nsp12260D260YGacTac11AY.1030.000006
ORF1ab/nsp12260D260YGacTac11AY.30.00001
ORF1ab/nsp12260D260YGacTac11B0.000128
ORF1ab/nsp12260D260YGacTac11B.1.1.10.000327
ORF1ab/nsp12260D260YGacTac11B.1.1.2440.015385
ORF1ab/nsp12260D260YGacTac11B.1.1.3180.000302
ORF1ab/nsp12260D260YGacTac11B.1.1.370.000193
ORF1ab/nsp12260D260YGacTac11B.1.2430.00007
ORF1ab/nsp12260D260YGacTac11B.1.3010.005917
ORF1ab/nsp12260D260YGacTac11B.1.3200.001245
ORF1ab/nsp12260D260YGacTac11B.1.3960.000706
ORF1ab/nsp12260D260YGacTac11B.280.003279
ORF1ab/nsp12260D260YGacTac11B.6.60.000889
ORF1ab/nsp12260D260YGacTac11Q.30.000145