CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = D260E

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12260D260ED4652EnonsyngaCgaA135711340.83566714218-14220
ORF1ab/nsp12260D260ED4652EnonsyngaCgaG13572230.16433314218-14220

Details of the mutation D260E within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12260D260EgaCgaA11341357All0.000217
ORF1ab/nsp12260D260EgaCgaG2231357All0.000043
ORF1ab/nsp12260D260EgaCgaA9571173B.1.1.70.000857
ORF1ab/nsp12260D260EgaCgaG2161173B.1.1.70.000193
ORF1ab/nsp12260D260EgaCgaA5858AY.9.10.004856
ORF1ab/nsp12260D260EgaCgaA3131AY.40.000048
ORF1ab/nsp12260D260EgaCgaA2323AY.4.50.002472
ORF1ab/nsp12260D260EgaCgaA99B.1.617.20.000034
ORF1ab/nsp12260D260EgaCgaA88AY.90.000541
ORF1ab/nsp12260D260EgaCgaG57AY.430.000022
ORF1ab/nsp12260D260EgaCgaA27AY.430.000009
ORF1ab/nsp12260D260EgaCgaA55R.10.00045
ORF1ab/nsp12260D260EgaCgaA44A.10.001127
ORF1ab/nsp12260D260EgaCgaA44AY.80.002424
ORF1ab/nsp12260D260EgaCgaA22AY.1200.000074
ORF1ab/nsp12260D260EgaCgaA12AY.30.00001
ORF1ab/nsp12260D260EgaCgaG12AY.30.00001
ORF1ab/nsp12260D260EgaCgaA22AY.580.001815
ORF1ab/nsp12260D260EgaCgaA22AY.630.000774
ORF1ab/nsp12260D260EgaCgaA22B.10.000018
ORF1ab/nsp12260D260EgaCgaA22B.1.1.330.000842
ORF1ab/nsp12260D260EgaCgaA22B.1.5610.000794
ORF1ab/nsp12260D260EgaCgaA110.055556
ORF1ab/nsp12260D260EgaCgaA11AY.1060.000335
ORF1ab/nsp12260D260EgaCgaA11AY.170.008197
ORF1ab/nsp12260D260EgaCgaG11AY.200.000039
ORF1ab/nsp12260D260EgaCgaA11AY.290.000016
ORF1ab/nsp12260D260EgaCgaA11AY.420.00004
ORF1ab/nsp12260D260EgaCgaA11AY.680.000274
ORF1ab/nsp12260D260EgaCgaA11AY.870.000833
ORF1ab/nsp12260D260EgaCgaA11AY.9.20.000037
ORF1ab/nsp12260D260EgaCgaA11AY.980.000079
ORF1ab/nsp12260D260EgaCgaA11AY.99.20.000092
ORF1ab/nsp12260D260EgaCgaA11B.1.10.000018
ORF1ab/nsp12260D260EgaCgaA11B.1.1.2220.000204
ORF1ab/nsp12260D260EgaCgaA11B.1.1110.001175
ORF1ab/nsp12260D260EgaCgaA11B.1.360.000146
ORF1ab/nsp12260D260EgaCgaA11B.1.4270.00005
ORF1ab/nsp12260D260EgaCgaA11B.1.5990.00365
ORF1ab/nsp12260D260EgaCgaA11B.1.6090.000479
ORF1ab/nsp12260D260EgaCgaA11C.350.000774
ORF1ab/nsp12260D260EgaCgaA11C.370.000116
ORF1ab/nsp12260D260EgaCgaA11P.10.000016