CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = D260D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12260D260DD4652DsyngaCgaT1308113081114218-14220

Details of the mutation D260D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12260D260DgaCgaT1308113081All0.002502
ORF1ab/nsp12260D260DgaCgaT57555755Q.10.727009
ORF1ab/nsp12260D260DgaCgaT20302030B.1.1.70.001817
ORF1ab/nsp12260D260DgaCgaT927927B.1.1.3330.997847
ORF1ab/nsp12260D260DgaCgaT596596AY.40.000928
ORF1ab/nsp12260D260DgaCgaT401401B.1.4290.009435
ORF1ab/nsp12260D260DgaCgaT298298P.10.004695
ORF1ab/nsp12260D260DgaCgaT293293B.1.20.00258
ORF1ab/nsp12260D260DgaCgaT198198AY.250.001191
ORF1ab/nsp12260D260DgaCgaT163163AY.440.000992
ORF1ab/nsp12260D260DgaCgaT143143B.10.00131
ORF1ab/nsp12260D260DgaCgaT129129B.1.617.20.000486
ORF1ab/nsp12260D260DgaCgaT121121AY.30.001204
ORF1ab/nsp12260D260DgaCgaT120120B.1.1.5190.004765
ORF1ab/nsp12260D260DgaCgaT119119AY.430.000527
ORF1ab/nsp12260D260DgaCgaT118118AY.1190.004166
ORF1ab/nsp12260D260DgaCgaT8787AY.1030.00054
ORF1ab/nsp12260D260DgaCgaT8080AY.470.002488
ORF1ab/nsp12260D260DgaCgaT6868AY.1200.002528
ORF1ab/nsp12260D260DgaCgaT5151B.1.10.000925
ORF1ab/nsp12260D260DgaCgaT5050AY.750.002801
ORF1ab/nsp12260D260DgaCgaT4848B.1.1770.000632
ORF1ab/nsp12260D260DgaCgaT4848B.1.3510.001427
ORF1ab/nsp12260D260DgaCgaT4646AY.4.20.000998
ORF1ab/nsp12260D260DgaCgaT4545B.1.177.120.006826
ORF1ab/nsp12260D260DgaCgaT4545B.1.5960.003921
ORF1ab/nsp12260D260DgaCgaT4444AY.420.00177
ORF1ab/nsp12260D260DgaCgaT4242B.1.5260.000987
ORF1ab/nsp12260D260DgaCgaT3838B.1.360.005544
ORF1ab/nsp12260D260DgaCgaT3535AY.260.000991
ORF1ab/nsp12260D260DgaCgaT3434AY.390.00084
ORF1ab/nsp12260D260DgaCgaT2727B.1.3110.007414
ORF1ab/nsp12260D260DgaCgaT2525B.1.1.2220.0051
ORF1ab/nsp12260D260DgaCgaT2525B.1.1600.00078
ORF1ab/nsp12260D260DgaCgaT2323B.1.4270.001161
ORF1ab/nsp12260D260DgaCgaT2222AY.1020.000583
ORF1ab/nsp12260D260DgaCgaT2121B.1.177.610.913043
ORF1ab/nsp12260D260DgaCgaT2020AY.9.20.000735
ORF1ab/nsp12260D260DgaCgaT2020B.1.5250.002263
ORF1ab/nsp12260D260DgaCgaT1919AY.50.000392
ORF1ab/nsp12260D260DgaCgaT1919B.1.1.2530.047619
ORF1ab/nsp12260D260DgaCgaT1717AY.290.000268
ORF1ab/nsp12260D260DgaCgaT1717B.1.258.170.001768
ORF1ab/nsp12260D260DgaCgaT1717P.1.10.0054
ORF1ab/nsp12260D260DgaCgaT1414P.1.100.003773
ORF1ab/nsp12260D260DgaCgaT1313AY.1070.006058
ORF1ab/nsp12260D260DgaCgaT1313AY.39.10.000515
ORF1ab/nsp12260D260DgaCgaT1313B.1.2580.000865
ORF1ab/nsp12260D260DgaCgaT1313B.1.617.10.001677
ORF1ab/nsp12260D260DgaCgaT1313B.1.6370.00095
ORF1ab/nsp12260D260DgaCgaT1313P.1.140.000621
ORF1ab/nsp12260D260DgaCgaT1212AY.200.000466
ORF1ab/nsp12260D260DgaCgaT1212B.1.1.2140.000665
ORF1ab/nsp12260D260DgaCgaT1111AY.120.003477
ORF1ab/nsp12260D260DgaCgaT1111AY.230.000767
ORF1ab/nsp12260D260DgaCgaT1111B.1.177.350.007602
ORF1ab/nsp12260D260DgaCgaT1010B.1.1.2160.008905
ORF1ab/nsp12260D260DgaCgaT1010B.1.160.240.044248
ORF1ab/nsp12260D260DgaCgaT1010B.1.2210.00071
ORF1ab/nsp12260D260DgaCgaT1010P.1.70.003193
ORF1ab/nsp12260D260DgaCgaT99AY.330.000601
ORF1ab/nsp12260D260DgaCgaT99AY.98.10.000436
ORF1ab/nsp12260D260DgaCgaT99B.1.438.10.000965
ORF1ab/nsp12260D260DgaCgaT88AY.610.000838
ORF1ab/nsp12260D260DgaCgaT88B.1.3460.010485
ORF1ab/nsp12260D260DgaCgaT88B.1.6210.000708
ORF1ab/nsp12260D260DgaCgaT88C.370.000929
ORF1ab/nsp12260D260DgaCgaT88P.1.120.003872
ORF1ab/nsp12260D260DgaCgaT88Q.80.001319
ORF1ab/nsp12260D260DgaCgaT77AY.1170.000592
ORF1ab/nsp12260D260DgaCgaT77AY.320.003727
ORF1ab/nsp12260D260DgaCgaT77B.1.1.3720.004821
ORF1ab/nsp12260D260DgaCgaT77B.1.2430.000487
ORF1ab/nsp12260D260DgaCgaT77B.1.5760.006346
ORF1ab/nsp12260D260DgaCgaT66AY.370.001896
ORF1ab/nsp12260D260DgaCgaT66AY.4.50.000645
ORF1ab/nsp12260D260DgaCgaT66AY.460.000624
ORF1ab/nsp12260D260DgaCgaT66AY.540.000572
ORF1ab/nsp12260D260DgaCgaT66AY.910.004383
ORF1ab/nsp12260D260DgaCgaT55AY.1050.003215
ORF1ab/nsp12260D260DgaCgaT55AY.1140.001156
ORF1ab/nsp12260D260DgaCgaT55AY.1180.000313
ORF1ab/nsp12260D260DgaCgaT55AY.99.20.000461
ORF1ab/nsp12260D260DgaCgaT55B.1.1.4340.001743
ORF1ab/nsp12260D260DgaCgaT55B.1.1.700.001705
ORF1ab/nsp12260D260DgaCgaT55B.1.4870.098039
ORF1ab/nsp12260D260DgaCgaT55B.1.9.20.5
ORF1ab/nsp12260D260DgaCgaT55D.20.000375
ORF1ab/nsp12260D260DgaCgaT55P.1.150.001162
ORF1ab/nsp12260D260DgaCgaT55P.20.000933
ORF1ab/nsp12260D260DgaCgaT44AY.4.40.001637
ORF1ab/nsp12260D260DgaCgaT44AY.46.10.004107
ORF1ab/nsp12260D260DgaCgaT44AY.46.40.000658
ORF1ab/nsp12260D260DgaCgaT44B.1.1.10.001307
ORF1ab/nsp12260D260DgaCgaT44B.1.1.2980.003448
ORF1ab/nsp12260D260DgaCgaT44B.1.1.3770.005525
ORF1ab/nsp12260D260DgaCgaT44B.1.177.860.000734
ORF1ab/nsp12260D260DgaCgaT44B.30.003322
ORF1ab/nsp12260D260DgaCgaT33A.23.10.002113
ORF1ab/nsp12260D260DgaCgaT33AY.116.10.000934
ORF1ab/nsp12260D260DgaCgaT33AY.140.000264
ORF1ab/nsp12260D260DgaCgaT33AY.350.000699
ORF1ab/nsp12260D260DgaCgaT33AY.380.001498
ORF1ab/nsp12260D260DgaCgaT33AY.650.001599
ORF1ab/nsp12260D260DgaCgaT33AY.75.10.000541
ORF1ab/nsp12260D260DgaCgaT33AY.840.001312
ORF1ab/nsp12260D260DgaCgaT33B.1.1.280.000934
ORF1ab/nsp12260D260DgaCgaT33B.1.1.330.001263
ORF1ab/nsp12260D260DgaCgaT33B.1.177.180.00348
ORF1ab/nsp12260D260DgaCgaT33B.1.177.40.000633
ORF1ab/nsp12260D260DgaCgaT33B.1.177.600.000655
ORF1ab/nsp12260D260DgaCgaT33B.1.3670.002377
ORF1ab/nsp12260D260DgaCgaT33B.1.5950.000783
ORF1ab/nsp12260D260DgaCgaT33C.36.30.001702
ORF1ab/nsp12260D260DgaCgaT33R.10.00027
ORF1ab/nsp12260D260DgaCgaT22A.2.50.000998
ORF1ab/nsp12260D260DgaCgaT22AY.1000.000092
ORF1ab/nsp12260D260DgaCgaT22AY.1130.000285
ORF1ab/nsp12260D260DgaCgaT22AY.1160.000574
ORF1ab/nsp12260D260DgaCgaT22AY.20.000712
ORF1ab/nsp12260D260DgaCgaT22AY.240.000862
ORF1ab/nsp12260D260DgaCgaT22AY.29.10.000441
ORF1ab/nsp12260D260DgaCgaT22AY.360.000296
ORF1ab/nsp12260D260DgaCgaT22AY.4.30.001684
ORF1ab/nsp12260D260DgaCgaT22AY.590.001059
ORF1ab/nsp12260D260DgaCgaT22AY.60.000082
ORF1ab/nsp12260D260DgaCgaT22AY.730.001331
ORF1ab/nsp12260D260DgaCgaT22AY.9.2.10.003953
ORF1ab/nsp12260D260DgaCgaT22B.1.1.100.00223
ORF1ab/nsp12260D260DgaCgaT22B.1.1.1010.02
ORF1ab/nsp12260D260DgaCgaT22B.1.1.250.001137
ORF1ab/nsp12260D260DgaCgaT22B.1.1.3120.003824
ORF1ab/nsp12260D260DgaCgaT22B.1.1.3890.012121
ORF1ab/nsp12260D260DgaCgaT22B.1.1.4090.005666
ORF1ab/nsp12260D260DgaCgaT22B.1.1.500.001358
ORF1ab/nsp12260D260DgaCgaT22B.1.1280.001271
ORF1ab/nsp12260D260DgaCgaT22B.1.177.520.003515
ORF1ab/nsp12260D260DgaCgaT22B.1.177.570.000562
ORF1ab/nsp12260D260DgaCgaT22B.1.1890.008584
ORF1ab/nsp12260D260DgaCgaT22B.1.2910.038462
ORF1ab/nsp12260D260DgaCgaT22B.1.3050.004301
ORF1ab/nsp12260D260DgaCgaT22B.1.3490.00143
ORF1ab/nsp12260D260DgaCgaT22B.1.36.180.00084
ORF1ab/nsp12260D260DgaCgaT22B.1.4590.008163
ORF1ab/nsp12260D260DgaCgaT22B.1.466.20.000782
ORF1ab/nsp12260D260DgaCgaT22B.1.4740.003802
ORF1ab/nsp12260D260DgaCgaT22B.1.5870.003795
ORF1ab/nsp12260D260DgaCgaT22B.1.6010.060606
ORF1ab/nsp12260D260DgaCgaT22B.1.6090.000959
ORF1ab/nsp12260D260DgaCgaT22B.1.6190.001742
ORF1ab/nsp12260D260DgaCgaT22B.1.621.10.001012
ORF1ab/nsp12260D260DgaCgaT22B.1.6270.00404
ORF1ab/nsp12260D260DgaCgaT22B.230.005848
ORF1ab/nsp12260D260DgaCgaT22B.400.000729
ORF1ab/nsp12260D260DgaCgaT22B.60.00182
ORF1ab/nsp12260D260DgaCgaT22C.300.003454
ORF1ab/nsp12260D260DgaCgaT22N.50.003534
ORF1ab/nsp12260D260DgaCgaT110.055556
ORF1ab/nsp12260D260DgaCgaT11A0.000387
ORF1ab/nsp12260D260DgaCgaT11AU.20.002421
ORF1ab/nsp12260D260DgaCgaT11AY.10.000396
ORF1ab/nsp12260D260DgaCgaT11AY.1010.00049
ORF1ab/nsp12260D260DgaCgaT11AY.1060.000335
ORF1ab/nsp12260D260DgaCgaT11AY.120.10.000321
ORF1ab/nsp12260D260DgaCgaT11AY.270.000065
ORF1ab/nsp12260D260DgaCgaT11AY.340.000097
ORF1ab/nsp12260D260DgaCgaT11AY.34.10.00051
ORF1ab/nsp12260D260DgaCgaT11AY.39.20.001541
ORF1ab/nsp12260D260DgaCgaT11AY.4.2.10.000149
ORF1ab/nsp12260D260DgaCgaT11AY.450.000122
ORF1ab/nsp12260D260DgaCgaT11AY.480.000465
ORF1ab/nsp12260D260DgaCgaT11AY.5.40.000277
ORF1ab/nsp12260D260DgaCgaT11AY.520.000814
ORF1ab/nsp12260D260DgaCgaT11AY.530.000288
ORF1ab/nsp12260D260DgaCgaT11AY.560.001605
ORF1ab/nsp12260D260DgaCgaT11AY.580.000907
ORF1ab/nsp12260D260DgaCgaT11AY.700.000209
ORF1ab/nsp12260D260DgaCgaT11AY.710.000475
ORF1ab/nsp12260D260DgaCgaT11AY.740.000116
ORF1ab/nsp12260D260DgaCgaT11AY.800.001129
ORF1ab/nsp12260D260DgaCgaT11AY.850.000427
ORF1ab/nsp12260D260DgaCgaT11AY.860.00083
ORF1ab/nsp12260D260DgaCgaT11AY.9.10.000084
ORF1ab/nsp12260D260DgaCgaT11AY.920.000287
ORF1ab/nsp12260D260DgaCgaT11B0.000128
ORF1ab/nsp12260D260DgaCgaT11B.1.1.1340.011364
ORF1ab/nsp12260D260DgaCgaT11B.1.1.1350.004695
ORF1ab/nsp12260D260DgaCgaT11B.1.1.1920.002309
ORF1ab/nsp12260D260DgaCgaT11B.1.1.2180.007692
ORF1ab/nsp12260D260DgaCgaT11B.1.1.2770.000759
ORF1ab/nsp12260D260DgaCgaT11B.1.1.2790.001121
ORF1ab/nsp12260D260DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp12260D260DgaCgaT11B.1.1.3060.000438
ORF1ab/nsp12260D260DgaCgaT11B.1.1.310.066667
ORF1ab/nsp12260D260DgaCgaT11B.1.1.4160.000905
ORF1ab/nsp12260D260DgaCgaT11B.1.1.4200.001006
ORF1ab/nsp12260D260DgaCgaT11B.1.1.470.005348
ORF1ab/nsp12260D260DgaCgaT11B.1.1.5170.006803
ORF1ab/nsp12260D260DgaCgaT11B.1.1.5180.006329
ORF1ab/nsp12260D260DgaCgaT11B.1.1.710.006061
ORF1ab/nsp12260D260DgaCgaT11B.1.1470.000756
ORF1ab/nsp12260D260DgaCgaT11B.1.177.320.00135
ORF1ab/nsp12260D260DgaCgaT11B.1.177.580.001332
ORF1ab/nsp12260D260DgaCgaT11B.1.177.70.000165
ORF1ab/nsp12260D260DgaCgaT11B.1.177.780.009709
ORF1ab/nsp12260D260DgaCgaT11B.1.2100.002132
ORF1ab/nsp12260D260DgaCgaT11B.1.2390.001221
ORF1ab/nsp12260D260DgaCgaT11B.1.2400.000216
ORF1ab/nsp12260D260DgaCgaT11B.1.258.110.000396
ORF1ab/nsp12260D260DgaCgaT11B.1.3180.038462
ORF1ab/nsp12260D260DgaCgaT11B.1.3190.003049
ORF1ab/nsp12260D260DgaCgaT11B.1.3200.001245
ORF1ab/nsp12260D260DgaCgaT11B.1.3330.010526
ORF1ab/nsp12260D260DgaCgaT11B.1.3400.004292
ORF1ab/nsp12260D260DgaCgaT11B.1.351.20.000303
ORF1ab/nsp12260D260DgaCgaT11B.1.351.30.000876
ORF1ab/nsp12260D260DgaCgaT11B.1.36.10.00114
ORF1ab/nsp12260D260DgaCgaT11B.1.36.220.001208
ORF1ab/nsp12260D260DgaCgaT11B.1.36.80.001
ORF1ab/nsp12260D260DgaCgaT11B.1.3690.000285
ORF1ab/nsp12260D260DgaCgaT11B.1.3750.00082
ORF1ab/nsp12260D260DgaCgaT11B.1.3780.006849
ORF1ab/nsp12260D260DgaCgaT11B.1.3990.001934
ORF1ab/nsp12260D260DgaCgaT11B.1.4090.000781
ORF1ab/nsp12260D260DgaCgaT11B.1.4160.001269
ORF1ab/nsp12260D260DgaCgaT11B.1.4320.011236
ORF1ab/nsp12260D260DgaCgaT11B.1.4680.005714
ORF1ab/nsp12260D260DgaCgaT11B.1.5090.000866
ORF1ab/nsp12260D260DgaCgaT11B.1.5440.006024
ORF1ab/nsp12260D260DgaCgaT11B.1.5580.004566
ORF1ab/nsp12260D260DgaCgaT11B.1.5680.001111
ORF1ab/nsp12260D260DgaCgaT11B.1.5790.011236
ORF1ab/nsp12260D260DgaCgaT11B.1.5880.00091
ORF1ab/nsp12260D260DgaCgaT11B.1.5900.004545
ORF1ab/nsp12260D260DgaCgaT11B.1.6280.000352
ORF1ab/nsp12260D260DgaCgaT11B.1.80.001972
ORF1ab/nsp12260D260DgaCgaT11B.6.60.000889
ORF1ab/nsp12260D260DgaCgaT11C.360.000911
ORF1ab/nsp12260D260DgaCgaT11P.1.40.000977
ORF1ab/nsp12260D260DgaCgaT11P.30.001595
ORF1ab/nsp12260D260DgaCgaT11Q.30.000145
ORF1ab/nsp12260D260DgaCgaT11U.10.012821
ORF1ab/nsp12260D260DgaCgaT11Z.10.00289