CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = D140Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12140D140YD4532YnonsynGacTac308030780.99935113858-13860
ORF1ab/nsp12140D140YD4532YnonsynGaCTaT308020.00064935113858-13860

Details of the mutation D140Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12140D140YGacTac30783080All0.000589
ORF1ab/nsp12140D140YGaCTaT23080All0
ORF1ab/nsp12140D140YGacTac967968AY.40.001505
ORF1ab/nsp12140D140YGaCTaT1968AY.40.000002
ORF1ab/nsp12140D140YGacTac463463B.1.36.211
ORF1ab/nsp12140D140YGacTac204204B.1.1.70.000183
ORF1ab/nsp12140D140YGacTac152152AY.460.01582
ORF1ab/nsp12140D140YGacTac145145AY.430.000642
ORF1ab/nsp12140D140YGacTac8585AY.50.001755
ORF1ab/nsp12140D140YGacTac7171B.1.617.20.000267
ORF1ab/nsp12140D140YGacTac6868AY.270.004401
ORF1ab/nsp12140D140YGacTac6767B.1.438.10.007187
ORF1ab/nsp12140D140YGacTac6161AY.250.000367
ORF1ab/nsp12140D140YGacTac6161B.1.617.10.007867
ORF1ab/nsp12140D140YGacTac5050B.1.5230.122549
ORF1ab/nsp12140D140YGacTac4545AY.1030.000279
ORF1ab/nsp12140D140YGacTac4444B.1.1.5190.001747
ORF1ab/nsp12140D140YGacTac3939B.1.5950.010177
ORF1ab/nsp12140D140YGacTac3232AY.260.000906
ORF1ab/nsp12140D140YGacTac3030B.1.2890.079787
ORF1ab/nsp12140D140YGacTac2929B.1.2340.003826
ORF1ab/nsp12140D140YGacTac2828B.1.1770.000369
ORF1ab/nsp12140D140YGacTac2626B.1.20.000229
ORF1ab/nsp12140D140YGacTac2525B.10.000229
ORF1ab/nsp12140D140YGacTac2222AY.440.000134
ORF1ab/nsp12140D140YGacTac2121AY.390.000519
ORF1ab/nsp12140D140YGacTac2020AY.370.006321
ORF1ab/nsp12140D140YGacTac2020B.1.3510.000595
ORF1ab/nsp12140D140YGacTac2020B.1.4270.00101
ORF1ab/nsp12140D140YGacTac1313AY.30.000129
ORF1ab/nsp12140D140YGacTac1212B.1.4290.000282
ORF1ab/nsp12140D140YGacTac1010A.230.105263
ORF1ab/nsp12140D140YGacTac99AY.1020.000239
ORF1ab/nsp12140D140YGacTac99B.1.1.2160.008014
ORF1ab/nsp12140D140YGacTac88AY.1190.000282
ORF1ab/nsp12140D140YGacTac88AY.290.000126
ORF1ab/nsp12140D140YGacTac88AY.940.003541
ORF1ab/nsp12140D140YGacTac88B.1.10.000145
ORF1ab/nsp12140D140YGacTac77AY.4.50.000752
ORF1ab/nsp12140D140YGacTac77AY.9.20.000257
ORF1ab/nsp12140D140YGacTac66AY.980.000474
ORF1ab/nsp12140D140YGacTac66AY.98.10.000291
ORF1ab/nsp12140D140YGacTac66B.1.5510.007742
ORF1ab/nsp12140D140YGacTac55AY.230.000349
ORF1ab/nsp12140D140YGacTac55AY.330.000334
ORF1ab/nsp12140D140YGacTac55AY.60.000206
ORF1ab/nsp12140D140YGacTac55AY.700.001043
ORF1ab/nsp12140D140YGacTac55B.1.5650.004052
ORF1ab/nsp12140D140YGacTac44AY.5.40.001107
ORF1ab/nsp12140D140YGacTac44B.1.2430.000278
ORF1ab/nsp12140D140YGacTac44Q.10.000505
ORF1ab/nsp12140D140YGacTac33AY.1130.000427
ORF1ab/nsp12140D140YGacTac33AY.1200.000112
ORF1ab/nsp12140D140YGacTac33AY.130.000483
ORF1ab/nsp12140D140YGacTac33AY.200.000117
ORF1ab/nsp12140D140YGacTac33AY.4.20.000065
ORF1ab/nsp12140D140YGacTac33AY.450.000365
ORF1ab/nsp12140D140YGacTac33AY.99.20.000276
ORF1ab/nsp12140D140YGacTac33B.1.1.2220.000612
ORF1ab/nsp12140D140YGacTac33B.1.1600.000094
ORF1ab/nsp12140D140YGacTac33B.1.5260.000071
ORF1ab/nsp12140D140YGacTac33P.20.00056
ORF1ab/nsp12140D140YGacTac120.055556
ORF1ab/nsp12140D140YGaCTaT120.055556
ORF1ab/nsp12140D140YGacTac22AY.1160.000574
ORF1ab/nsp12140D140YGacTac22AY.1170.000169
ORF1ab/nsp12140D140YGacTac22AY.1180.000125
ORF1ab/nsp12140D140YGacTac22AY.140.000176
ORF1ab/nsp12140D140YGacTac22AY.4.40.000818
ORF1ab/nsp12140D140YGacTac22AY.670.000929
ORF1ab/nsp12140D140YGacTac22AY.750.000112
ORF1ab/nsp12140D140YGacTac22AY.75.10.000361
ORF1ab/nsp12140D140YGacTac22AY.9.10.000167
ORF1ab/nsp12140D140YGacTac22AY.920.000575
ORF1ab/nsp12140D140YGacTac22B.1.1.2940.002532
ORF1ab/nsp12140D140YGacTac22B.1.1.3120.003824
ORF1ab/nsp12140D140YGacTac22B.1.1.5160.133333
ORF1ab/nsp12140D140YGacTac22B.1.2210.000142
ORF1ab/nsp12140D140YGacTac22B.1.3960.001411
ORF1ab/nsp12140D140YGacTac22N.90.011905
ORF1ab/nsp12140D140YGacTac11AA.30.027027
ORF1ab/nsp12140D140YGacTac11AA.40.009091
ORF1ab/nsp12140D140YGacTac11AY.1000.000046
ORF1ab/nsp12140D140YGacTac11AY.1040.001984
ORF1ab/nsp12140D140YGacTac11AY.1050.000643
ORF1ab/nsp12140D140YGacTac11AY.1100.000113
ORF1ab/nsp12140D140YGacTac11AY.120.10.000321
ORF1ab/nsp12140D140YGacTac11AY.120.20.001285
ORF1ab/nsp12140D140YGacTac11AY.3.10.000085
ORF1ab/nsp12140D140YGacTac11AY.320.000532
ORF1ab/nsp12140D140YGacTac11AY.380.000499
ORF1ab/nsp12140D140YGacTac11AY.4.30.000842
ORF1ab/nsp12140D140YGacTac11AY.400.000964
ORF1ab/nsp12140D140YGacTac11AY.410.000294
ORF1ab/nsp12140D140YGacTac11AY.420.00004
ORF1ab/nsp12140D140YGacTac11AY.46.60.000072
ORF1ab/nsp12140D140YGacTac11AY.510.000909
ORF1ab/nsp12140D140YGacTac11AY.610.000105
ORF1ab/nsp12140D140YGacTac11AY.620.000436
ORF1ab/nsp12140D140YGacTac11AY.630.000387
ORF1ab/nsp12140D140YGacTac11AY.640.000595
ORF1ab/nsp12140D140YGacTac11AY.650.000533
ORF1ab/nsp12140D140YGacTac11AY.660.00107
ORF1ab/nsp12140D140YGacTac11AY.7.20.000559
ORF1ab/nsp12140D140YGacTac11AY.830.001724
ORF1ab/nsp12140D140YGacTac11B0.000128
ORF1ab/nsp12140D140YGacTac11B.1.1.10.000327
ORF1ab/nsp12140D140YGacTac11B.1.1.100.001115
ORF1ab/nsp12140D140YGacTac11B.1.1.1760.000439
ORF1ab/nsp12140D140YGacTac11B.1.1.2140.000055
ORF1ab/nsp12140D140YGacTac11B.1.1.2690.001353
ORF1ab/nsp12140D140YGacTac11B.1.1.2700.010309
ORF1ab/nsp12140D140YGacTac11B.1.1.280.000311
ORF1ab/nsp12140D140YGacTac11B.1.1.3060.000438
ORF1ab/nsp12140D140YGacTac11B.1.1.3350.012987
ORF1ab/nsp12140D140YGacTac11B.1.1.390.00051
ORF1ab/nsp12140D140YGacTac11B.1.1.4160.000905
ORF1ab/nsp12140D140YGacTac11B.1.1.4210.030303
ORF1ab/nsp12140D140YGacTac11B.1.1.4340.000349
ORF1ab/nsp12140D140YGacTac11B.1.1.930.025641
ORF1ab/nsp12140D140YGacTac11B.1.1040.00369
ORF1ab/nsp12140D140YGacTac11B.1.160.300.002976
ORF1ab/nsp12140D140YGacTac11B.1.177.450.000381
ORF1ab/nsp12140D140YGacTac11B.1.177.460.000918
ORF1ab/nsp12140D140YGacTac11B.1.177.560.000668
ORF1ab/nsp12140D140YGacTac11B.1.177.70.000165
ORF1ab/nsp12140D140YGacTac11B.1.177.750.001041
ORF1ab/nsp12140D140YGacTac11B.1.2580.000067
ORF1ab/nsp12140D140YGacTac11B.1.258.170.000104
ORF1ab/nsp12140D140YGacTac11B.1.351.20.000303
ORF1ab/nsp12140D140YGacTac11B.1.360.000146
ORF1ab/nsp12140D140YGacTac11B.1.36.10.00114
ORF1ab/nsp12140D140YGacTac11B.1.3660.004878
ORF1ab/nsp12140D140YGacTac11B.1.4280.00102
ORF1ab/nsp12140D140YGacTac11B.1.5090.000866
ORF1ab/nsp12140D140YGacTac11B.120.00641
ORF1ab/nsp12140D140YGacTac11B.30.000831
ORF1ab/nsp12140D140YGacTac11C.350.000774
ORF1ab/nsp12140D140YGacTac11C.36.30.000567
ORF1ab/nsp12140D140YGacTac11C.370.000116
ORF1ab/nsp12140D140YGacTac11D.20.000075
ORF1ab/nsp12140D140YGacTac11N.30.005814
ORF1ab/nsp12140D140YGacTac11Q.30.000145