CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A558T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12558A558TA4950TnonsynGctAct1070.715112-15114
ORF1ab/nsp12558A558TA4950TnonsynGcTAcC1020.215112-15114
ORF1ab/nsp12558A558TA4950TnonsynGcTAcA1010.115112-15114

Details of the mutation A558T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12558A558TGctAct710All0.000001
ORF1ab/nsp12558A558TGcTAcC210All0
ORF1ab/nsp12558A558TGcTAcA110All0
ORF1ab/nsp12558A558TGctAct350.166667
ORF1ab/nsp12558A558TGcTAcC250.111111
ORF1ab/nsp12558A558TGctAct11B.10.000009
ORF1ab/nsp12558A558TGctAct11B.1.1.3720.000689
ORF1ab/nsp12558A558TGctAct11B.1.1770.000013
ORF1ab/nsp12558A558TGcTAcA11B.1.4160.001269
ORF1ab/nsp12558A558TGctAct11B.1.6250.002353