CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A529V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12529A529VA4921VnonsyngCagTa12796127890.99945315025-15027
ORF1ab/nsp12529A529VA4921VnonsyngCAgTT1279630.00023444815025-15027
ORF1ab/nsp12529A529VA4921VnonsyngCAgTG1279620.00015629915025-15027
ORF1ab/nsp12529A529VA4921VnonsyngCAgTC1279620.00015629915025-15027

Details of the mutation A529V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12529A529VgCagTa1278912796All0.002446
ORF1ab/nsp12529A529VgCAgTT312796All0.000001
ORF1ab/nsp12529A529VgCAgTG212796All0
ORF1ab/nsp12529A529VgCAgTC212796All0
ORF1ab/nsp12529A529VgCagTa26012601B.1.1.70.002328
ORF1ab/nsp12529A529VgCagTa12551255B.1.6280.442213
ORF1ab/nsp12529A529VgCagTa824824C.36.30.467385
ORF1ab/nsp12529A529VgCagTa794794AY.1200.02952
ORF1ab/nsp12529A529VgCagTa767767AY.1030.004762
ORF1ab/nsp12529A529VgCagTa639639AY.40.000995
ORF1ab/nsp12529A529VgCagTa613613AY.640.364881
ORF1ab/nsp12529A529VgCagTa462462B.1.5260.010859
ORF1ab/nsp12529A529VgCagTa445445B.1.2580.029613
ORF1ab/nsp12529A529VgCagTa397397B.1.617.20.001495
ORF1ab/nsp12529A529VgCagTa345345B.1.20.003038
ORF1ab/nsp12529A529VgCagTa226226B.10.00207
ORF1ab/nsp12529A529VgCagTa220221AY.440.001339
ORF1ab/nsp12529A529VgCAgTC1221AY.440.000006
ORF1ab/nsp12529A529VgCagTa191191AY.330.012755
ORF1ab/nsp12529A529VgCagTa184184AY.250.001107
ORF1ab/nsp12529A529VgCagTa141141AY.30.001402
ORF1ab/nsp12529A529VgCagTa140140B.1.3510.004162
ORF1ab/nsp12529A529VgCagTa139139AY.1190.004908
ORF1ab/nsp12529A529VgCagTa136136B.1.466.10.978417
ORF1ab/nsp12529A529VgCagTa135135AY.430.000598
ORF1ab/nsp12529A529VgCagTa114114B.1.2430.007933
ORF1ab/nsp12529A529VgCagTa104104AY.410.03057
ORF1ab/nsp12529A529VgCagTa9595AY.290.001498
ORF1ab/nsp12529A529VgCagTa7878P.10.001229
ORF1ab/nsp12529A529VgCagTa6969AY.230.004813
ORF1ab/nsp12529A529VgCagTa6767B.1.10.001215
ORF1ab/nsp12529A529VgCagTa6060AY.470.001866
ORF1ab/nsp12529A529VgCagTa5252AY.200.002021
ORF1ab/nsp12529A529VgCagTa5151B.1.4290.0012
ORF1ab/nsp12529A529VgCagTa5050B.1.4700.070225
ORF1ab/nsp12529A529VgCagTa4949B.1.438.10.005256
ORF1ab/nsp12529A529VgCagTa4848B.1.1.2140.002662
ORF1ab/nsp12529A529VgCagTa4646B.1.1.5190.001827
ORF1ab/nsp12529A529VgCagTa4646B.1.6230.024678
ORF1ab/nsp12529A529VgCagTa4444AY.120.2.10.021923
ORF1ab/nsp12529A529VgCagTa4444B.1.177.60.042969
ORF1ab/nsp12529A529VgCagTa4242AY.1020.001114
ORF1ab/nsp12529A529VgCagTa4242AY.4.20.000911
ORF1ab/nsp12529A529VgCagTa3636AY.390.00089
ORF1ab/nsp12529A529VgCagTa3636C.370.004178
ORF1ab/nsp12529A529VgCagTa3535P.1.70.011175
ORF1ab/nsp12529A529VgCagTa3333B.1.4260.0333
ORF1ab/nsp12529A529VgCagTa3030AY.60.001234
ORF1ab/nsp12529A529VgCagTa2424B.1.4270.001212
ORF1ab/nsp12529A529VgCagTa2323B.1.1600.000717
ORF1ab/nsp12529A529VgCagTa2222AY.1000.001012
ORF1ab/nsp12529A529VgCagTa2020B.1.1770.000263
ORF1ab/nsp12529A529VgCagTa2020B.1.5960.001743
ORF1ab/nsp12529A529VgCagTa1919A.280.050265
ORF1ab/nsp12529A529VgCagTa1919AY.9.20.000698
ORF1ab/nsp12529A529VgCagTa1919B.1.1.580.102151
ORF1ab/nsp12529A529VgCagTa1616AY.260.000453
ORF1ab/nsp12529A529VgCagTa1616C.360.014572
ORF1ab/nsp12529A529VgCagTa1515B.1.2210.001065
ORF1ab/nsp12529A529VgCagTa1515B.1.6370.001096
ORF1ab/nsp12529A529VgCagTa1414AY.5.40.003874
ORF1ab/nsp12529A529VgCagTa1414B.1.177.120.002124
ORF1ab/nsp12529A529VgCagTa1414B.1.177.810.002651
ORF1ab/nsp12529A529VgCagTa1313AY.50.000268
ORF1ab/nsp12529A529VgCagTa1212B.1.2340.001583
ORF1ab/nsp12529A529VgCagTa1111AY.1180.000689
ORF1ab/nsp12529A529VgCagTa1111AY.360.00163
ORF1ab/nsp12529A529VgCagTa1111AY.46.60.000794
ORF1ab/nsp12529A529VgCagTa1111AY.540.001049
ORF1ab/nsp12529A529VgCagTa4100.222222
ORF1ab/nsp12529A529VgCAgTT3100.166667
ORF1ab/nsp12529A529VgCAgTG2100.111111
ORF1ab/nsp12529A529VgCAgTC1100.055556
ORF1ab/nsp12529A529VgCagTa1010AY.1140.002311
ORF1ab/nsp12529A529VgCagTa1010AY.1170.000845
ORF1ab/nsp12529A529VgCagTa1010AY.450.001217
ORF1ab/nsp12529A529VgCagTa99AY.1210.001218
ORF1ab/nsp12529A529VgCagTa99AY.300.003562
ORF1ab/nsp12529A529VgCagTa99AY.900.00616
ORF1ab/nsp12529A529VgCagTa99B.1.1280.005718
ORF1ab/nsp12529A529VgCagTa99P.1.140.00043
ORF1ab/nsp12529A529VgCagTa88AY.4.2.10.001192
ORF1ab/nsp12529A529VgCagTa88AY.4.50.00086
ORF1ab/nsp12529A529VgCagTa88AY.650.004264
ORF1ab/nsp12529A529VgCagTa88AY.990.008395
ORF1ab/nsp12529A529VgCagTa88B.1.3690.002282
ORF1ab/nsp12529A529VgCagTa88Q.20.004908
ORF1ab/nsp12529A529VgCagTa77B.1.1.10.002287
ORF1ab/nsp12529A529VgCagTa77B.1.1.5250.038251
ORF1ab/nsp12529A529VgCagTa66AY.370.001896
ORF1ab/nsp12529A529VgCagTa66AY.46.40.000987
ORF1ab/nsp12529A529VgCagTa66B.1.617.10.000774
ORF1ab/nsp12529A529VgCagTa66P.1.120.002904
ORF1ab/nsp12529A529VgCagTa55AY.170.040984
ORF1ab/nsp12529A529VgCagTa55AY.75.10.000902
ORF1ab/nsp12529A529VgCagTa55B0.000639
ORF1ab/nsp12529A529VgCagTa55B.1.1.1530.005476
ORF1ab/nsp12529A529VgCagTa55B.1.1.280.001556
ORF1ab/nsp12529A529VgCagTa55B.1.4990.005252
ORF1ab/nsp12529A529VgCagTa44A.210.01108
ORF1ab/nsp12529A529VgCagTa44AY.1110.000733
ORF1ab/nsp12529A529VgCagTa44AY.130.000644
ORF1ab/nsp12529A529VgCagTa44AY.160.001519
ORF1ab/nsp12529A529VgCagTa44AY.16.10.00188
ORF1ab/nsp12529A529VgCagTa44AY.3.10.000341
ORF1ab/nsp12529A529VgCagTa44AY.340.000388
ORF1ab/nsp12529A529VgCagTa44AY.660.004278
ORF1ab/nsp12529A529VgCagTa44AY.750.000224
ORF1ab/nsp12529A529VgCagTa44AY.9.10.000335
ORF1ab/nsp12529A529VgCagTa44AY.99.20.000369
ORF1ab/nsp12529A529VgCagTa44B.1.1.2220.000816
ORF1ab/nsp12529A529VgCagTa44B.1.1.3170.001647
ORF1ab/nsp12529A529VgCagTa44B.1.2790.002054
ORF1ab/nsp12529A529VgCagTa44B.1.36.290.002069
ORF1ab/nsp12529A529VgCagTa44B.1.4590.016327
ORF1ab/nsp12529A529VgCagTa44B.1.5390.070175
ORF1ab/nsp12529A529VgCagTa44C.36.3.10.01087
ORF1ab/nsp12529A529VgCagTa44Q.10.000505
ORF1ab/nsp12529A529VgCagTa33A.2.50.001497
ORF1ab/nsp12529A529VgCagTa33AY.10.001187
ORF1ab/nsp12529A529VgCagTa33AY.1060.001005
ORF1ab/nsp12529A529VgCagTa33AY.1090.002219
ORF1ab/nsp12529A529VgCagTa33AY.1100.000338
ORF1ab/nsp12529A529VgCagTa33AY.320.001597
ORF1ab/nsp12529A529VgCagTa33AY.420.000121
ORF1ab/nsp12529A529VgCagTa33AY.460.000312
ORF1ab/nsp12529A529VgCagTa33AY.670.001393
ORF1ab/nsp12529A529VgCagTa33AY.730.001996
ORF1ab/nsp12529A529VgCagTa33AY.80.001818
ORF1ab/nsp12529A529VgCagTa33AY.930.000819
ORF1ab/nsp12529A529VgCagTa33AY.980.000237
ORF1ab/nsp12529A529VgCagTa33B.1.1.2360.02069
ORF1ab/nsp12529A529VgCagTa33B.1.1.250.001706
ORF1ab/nsp12529A529VgCagTa33B.1.177.170.002463
ORF1ab/nsp12529A529VgCagTa33B.1.177.240.003886
ORF1ab/nsp12529A529VgCagTa33B.1.177.820.001432
ORF1ab/nsp12529A529VgCagTa33B.1.2370.014925
ORF1ab/nsp12529A529VgCagTa33B.1.258.30.005025
ORF1ab/nsp12529A529VgCagTa33B.1.3890.003006
ORF1ab/nsp12529A529VgCagTa33B.1.4110.011111
ORF1ab/nsp12529A529VgCagTa33B.1.6210.000266
ORF1ab/nsp12529A529VgCagTa33B.1.9.50.017045
ORF1ab/nsp12529A529VgCagTa33N.50.0053
ORF1ab/nsp12529A529VgCagTa33R.10.00027
ORF1ab/nsp12529A529VgCagTa22A0.000774
ORF1ab/nsp12529A529VgCagTa22AY.120.000632
ORF1ab/nsp12529A529VgCagTa22AY.23.10.000835
ORF1ab/nsp12529A529VgCagTa22AY.240.000862
ORF1ab/nsp12529A529VgCagTa22AY.29.10.000441
ORF1ab/nsp12529A529VgCagTa22AY.39.10.000079
ORF1ab/nsp12529A529VgCagTa22AY.4.10.001475
ORF1ab/nsp12529A529VgCagTa22AY.4.30.001684
ORF1ab/nsp12529A529VgCagTa22AY.5.30.000675
ORF1ab/nsp12529A529VgCagTa22AY.550.001835
ORF1ab/nsp12529A529VgCagTa22AY.690.000373
ORF1ab/nsp12529A529VgCagTa22AY.90.000135
ORF1ab/nsp12529A529VgCagTa22B.1.1.2530.005013
ORF1ab/nsp12529A529VgCagTa22B.1.1.2630.003115
ORF1ab/nsp12529A529VgCagTa22B.1.1.2940.002532
ORF1ab/nsp12529A529VgCagTa22B.1.1.330.000842
ORF1ab/nsp12529A529VgCagTa22B.1.1.3350.025974
ORF1ab/nsp12529A529VgCagTa22B.1.1.370.000386
ORF1ab/nsp12529A529VgCagTa22B.1.1.3700.025316
ORF1ab/nsp12529A529VgCagTa22B.1.1.3720.001377
ORF1ab/nsp12529A529VgCagTa22B.1.1.4320.002532
ORF1ab/nsp12529A529VgCagTa22B.1.177.210.000153
ORF1ab/nsp12529A529VgCagTa22B.1.177.730.001133
ORF1ab/nsp12529A529VgCagTa22B.1.2600.006689
ORF1ab/nsp12529A529VgCagTa22B.1.351.20.000605
ORF1ab/nsp12529A529VgCagTa22B.1.36.220.002415
ORF1ab/nsp12529A529VgCagTa22B.1.4090.001563
ORF1ab/nsp12529A529VgCagTa22B.1.4600.035714
ORF1ab/nsp12529A529VgCagTa22B.1.4620.014493
ORF1ab/nsp12529A529VgCagTa22B.1.466.20.000782
ORF1ab/nsp12529A529VgCagTa22B.1.5670.006667
ORF1ab/nsp12529A529VgCagTa22B.1.5730.012195
ORF1ab/nsp12529A529VgCagTa22B.1.5820.000981
ORF1ab/nsp12529A529VgCagTa22B.1.6270.00404
ORF1ab/nsp12529A529VgCagTa22B.1.810.042553
ORF1ab/nsp12529A529VgCagTa22D.20.00015
ORF1ab/nsp12529A529VgCagTa22P.1.130.001797
ORF1ab/nsp12529A529VgCagTa22P.40.007605
ORF1ab/nsp12529A529VgCagTa22Q.80.00033
ORF1ab/nsp12529A529VgCagTa11A.23.10.000704
ORF1ab/nsp12529A529VgCagTa11A.270.001656
ORF1ab/nsp12529A529VgCagTa11AE.80.000489
ORF1ab/nsp12529A529VgCagTa11AU.10.001266
ORF1ab/nsp12529A529VgCagTa11AY.100.00053
ORF1ab/nsp12529A529VgCagTa11AY.1050.000643
ORF1ab/nsp12529A529VgCagTa11AY.1080.001103
ORF1ab/nsp12529A529VgCagTa11AY.1130.000142
ORF1ab/nsp12529A529VgCagTa11AY.1160.000287
ORF1ab/nsp12529A529VgCagTa11AY.116.10.000311
ORF1ab/nsp12529A529VgCagTa11AY.120.10.000321
ORF1ab/nsp12529A529VgCagTa11AY.120.20.001285
ORF1ab/nsp12529A529VgCagTa11AY.140.000088
ORF1ab/nsp12529A529VgCagTa11AY.270.000065
ORF1ab/nsp12529A529VgCagTa11AY.350.000233
ORF1ab/nsp12529A529VgCagTa11AY.4.40.000409
ORF1ab/nsp12529A529VgCagTa11AY.480.000465
ORF1ab/nsp12529A529VgCagTa11AY.520.000814
ORF1ab/nsp12529A529VgCagTa11AY.530.000288
ORF1ab/nsp12529A529VgCagTa11AY.590.00053
ORF1ab/nsp12529A529VgCagTa11AY.600.000938
ORF1ab/nsp12529A529VgCagTa11AY.610.000105
ORF1ab/nsp12529A529VgCagTa11AY.620.000436
ORF1ab/nsp12529A529VgCagTa11AY.630.000387
ORF1ab/nsp12529A529VgCagTa11AY.680.000274
ORF1ab/nsp12529A529VgCagTa11AY.700.000209
ORF1ab/nsp12529A529VgCagTa11AY.820.001357
ORF1ab/nsp12529A529VgCagTa11AY.840.000437
ORF1ab/nsp12529A529VgCagTa11AY.880.000884
ORF1ab/nsp12529A529VgCagTa11AY.920.000287
ORF1ab/nsp12529A529VgCagTa11AY.950.000761
ORF1ab/nsp12529A529VgCagTa11AY.98.10.000048
ORF1ab/nsp12529A529VgCagTa11B.1.1.100.001115
ORF1ab/nsp12529A529VgCagTa11B.1.1.1170.009709
ORF1ab/nsp12529A529VgCagTa11B.1.1.1700.001247
ORF1ab/nsp12529A529VgCagTa11B.1.1.2070.001182
ORF1ab/nsp12529A529VgCagTa11B.1.1.2160.00089
ORF1ab/nsp12529A529VgCagTa11B.1.1.2770.000759
ORF1ab/nsp12529A529VgCagTa11B.1.1.2840.000107
ORF1ab/nsp12529A529VgCagTa11B.1.1.2910.000742
ORF1ab/nsp12529A529VgCagTa11B.1.1.3060.000438
ORF1ab/nsp12529A529VgCagTa11B.1.1.3110.000358
ORF1ab/nsp12529A529VgCagTa11B.1.1.3480.000796
ORF1ab/nsp12529A529VgCagTa11B.1.1.3970.002252
ORF1ab/nsp12529A529VgCagTa11B.1.1.4640.001473
ORF1ab/nsp12529A529VgCagTa11B.1.1.4830.038462
ORF1ab/nsp12529A529VgCagTa11B.1.1.560.017857
ORF1ab/nsp12529A529VgCagTa11B.1.1260.001276
ORF1ab/nsp12529A529VgCagTa11B.1.1570.002985
ORF1ab/nsp12529A529VgCagTa11B.1.160.110.005714
ORF1ab/nsp12529A529VgCagTa11B.1.177.180.00116
ORF1ab/nsp12529A529VgCagTa11B.1.177.320.00135
ORF1ab/nsp12529A529VgCagTa11B.1.177.440.000519
ORF1ab/nsp12529A529VgCagTa11B.1.177.480.003125
ORF1ab/nsp12529A529VgCagTa11B.1.177.500.004695
ORF1ab/nsp12529A529VgCagTa11B.1.177.570.000281
ORF1ab/nsp12529A529VgCagTa11B.1.177.70.000165
ORF1ab/nsp12529A529VgCagTa11B.1.177.750.001041
ORF1ab/nsp12529A529VgCagTa11B.1.177.830.001481
ORF1ab/nsp12529A529VgCagTa11B.1.177.850.005435
ORF1ab/nsp12529A529VgCagTa11B.1.177.860.000183
ORF1ab/nsp12529A529VgCagTa11B.1.214.20.0006
ORF1ab/nsp12529A529VgCagTa11B.1.2220.001692
ORF1ab/nsp12529A529VgCagTa11B.1.2400.000216
ORF1ab/nsp12529A529VgCagTa11B.1.2700.005618
ORF1ab/nsp12529A529VgCagTa11B.1.2840.013158
ORF1ab/nsp12529A529VgCagTa11B.1.3110.000275
ORF1ab/nsp12529A529VgCagTa11B.1.3200.001245
ORF1ab/nsp12529A529VgCagTa11B.1.351.50.0006
ORF1ab/nsp12529A529VgCagTa11B.1.360.000146
ORF1ab/nsp12529A529VgCagTa11B.1.36.180.00042
ORF1ab/nsp12529A529VgCagTa11B.1.36.260.002857
ORF1ab/nsp12529A529VgCagTa11B.1.36.310.001751
ORF1ab/nsp12529A529VgCagTa11B.1.36.70.004
ORF1ab/nsp12529A529VgCagTa11B.1.3620.001541
ORF1ab/nsp12529A529VgCagTa11B.1.362.20.004717
ORF1ab/nsp12529A529VgCagTa11B.1.3910.001127
ORF1ab/nsp12529A529VgCagTa11B.1.4160.001269
ORF1ab/nsp12529A529VgCagTa11B.1.4200.010417
ORF1ab/nsp12529A529VgCagTa11B.1.4690.00361
ORF1ab/nsp12529A529VgCagTa11B.1.4970.000315
ORF1ab/nsp12529A529VgCagTa11B.1.5090.000866
ORF1ab/nsp12529A529VgCagTa11B.1.5170.000427
ORF1ab/nsp12529A529VgCagTa11B.1.5250.000113
ORF1ab/nsp12529A529VgCagTa11B.1.5330.009615
ORF1ab/nsp12529A529VgCagTa11B.1.5600.00463
ORF1ab/nsp12529A529VgCagTa11B.1.5720.025
ORF1ab/nsp12529A529VgCagTa11B.1.5740.002151
ORF1ab/nsp12529A529VgCagTa11B.1.5950.000261
ORF1ab/nsp12529A529VgCagTa11B.1.596.10.009346
ORF1ab/nsp12529A529VgCagTa11B.1.5970.00463
ORF1ab/nsp12529A529VgCagTa11B.1.6190.000871
ORF1ab/nsp12529A529VgCagTa11C.140.004329
ORF1ab/nsp12529A529VgCagTa11C.180.002591
ORF1ab/nsp12529A529VgCagTa11P.1.150.000232
ORF1ab/nsp12529A529VgCagTa11P.1.170.000162
ORF1ab/nsp12529A529VgCagTa11P.1.60.001946
ORF1ab/nsp12529A529VgCagTa11Q.30.000145