CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A4V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp124A4VA4396VnonsyngCagTa22802280113451-13453

Details of the mutation A4V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp124A4VgCagTa22802280All0.000436
ORF1ab/nsp124A4VgCagTa920920AY.40.001432
ORF1ab/nsp124A4VgCagTa329329B.1.5700.967647
ORF1ab/nsp124A4VgCagTa304304B.1.1.70.000272
ORF1ab/nsp124A4VgCagTa117117AY.1030.000726
ORF1ab/nsp124A4VgCagTa5555B.1.617.20.000207
ORF1ab/nsp124A4VgCagTa5555B.1.6370.004019
ORF1ab/nsp124A4VgCagTa4343AY.30.000428
ORF1ab/nsp124A4VgCagTa3333B.1.20.000291
ORF1ab/nsp124A4VgCagTa2929B.1.2580.00193
ORF1ab/nsp124A4VgCagTa2424AY.250.000144
ORF1ab/nsp124A4VgCagTa2222B.1.4290.000518
ORF1ab/nsp124A4VgCagTa2121AY.430.000093
ORF1ab/nsp124A4VgCagTa2121B.10.000192
ORF1ab/nsp124A4VgCagTa1717B.1.1770.000224
ORF1ab/nsp124A4VgCagTa1616AY.260.000453
ORF1ab/nsp124A4VgCagTa1616AY.390.000395
ORF1ab/nsp124A4VgCagTa1414AY.340.001358
ORF1ab/nsp124A4VgCagTa1414AY.50.000289
ORF1ab/nsp124A4VgCagTa1313B.1.177.70.002143
ORF1ab/nsp124A4VgCagTa1313C.370.001509
ORF1ab/nsp124A4VgCagTa99AY.450.001095
ORF1ab/nsp124A4VgCagTa99B.1.4280.009184
ORF1ab/nsp124A4VgCagTa88B.1.4270.000404
ORF1ab/nsp124A4VgCagTa88P.10.000126
ORF1ab/nsp124A4VgCagTa66AY.1100.000676
ORF1ab/nsp124A4VgCagTa66AY.230.000418
ORF1ab/nsp124A4VgCagTa66AY.440.000037
ORF1ab/nsp124A4VgCagTa66B.1.10.000109
ORF1ab/nsp124A4VgCagTa66B.1.258.170.000624
ORF1ab/nsp124A4VgCagTa66B.1.5750.00182
ORF1ab/nsp124A4VgCagTa55AY.1020.000133
ORF1ab/nsp124A4VgCagTa55AY.46.20.003177
ORF1ab/nsp124A4VgCagTa55B.1.1.1700.006234
ORF1ab/nsp124A4VgCagTa55Q.10.000632
ORF1ab/nsp124A4VgCagTa44AY.120.10.001284
ORF1ab/nsp124A4VgCagTa44B.1.1.5190.000159
ORF1ab/nsp124A4VgCagTa33AY.4.20.000065
ORF1ab/nsp124A4VgCagTa33AY.4.50.000322
ORF1ab/nsp124A4VgCagTa33AY.460.000312
ORF1ab/nsp124A4VgCagTa33AY.620.001307
ORF1ab/nsp124A4VgCagTa33AY.980.000237
ORF1ab/nsp124A4VgCagTa33B.1.177.80.002257
ORF1ab/nsp124A4VgCagTa33B.1.2290.029126
ORF1ab/nsp124A4VgCagTa33B.1.5260.000071
ORF1ab/nsp124A4VgCagTa33B.1.5410.013274
ORF1ab/nsp124A4VgCagTa33B.1.5960.000261
ORF1ab/nsp124A4VgCagTa33L.10.005714
ORF1ab/nsp124A4VgCagTa22AY.1200.000074
ORF1ab/nsp124A4VgCagTa22AY.470.000062
ORF1ab/nsp124A4VgCagTa22AY.7.10.000225
ORF1ab/nsp124A4VgCagTa22AY.98.10.000097
ORF1ab/nsp124A4VgCagTa22AY.99.20.000184
ORF1ab/nsp124A4VgCagTa22B.1.1.280.000622
ORF1ab/nsp124A4VgCagTa22B.1.1.4190.014815
ORF1ab/nsp124A4VgCagTa22B.1.177.170.001642
ORF1ab/nsp124A4VgCagTa22B.1.3510.000059
ORF1ab/nsp124A4VgCagTa22B.1.6200.001892
ORF1ab/nsp124A4VgCagTa22Q.80.00033
ORF1ab/nsp124A4VgCagTa22W.40.002703
ORF1ab/nsp124A4VgCagTa11A.23.10.000704
ORF1ab/nsp124A4VgCagTa11AY.1070.000466
ORF1ab/nsp124A4VgCagTa11AY.1170.000085
ORF1ab/nsp124A4VgCagTa11AY.1180.000063
ORF1ab/nsp124A4VgCagTa11AY.120.20.001285
ORF1ab/nsp124A4VgCagTa11AY.190.00114
ORF1ab/nsp124A4VgCagTa11AY.200.000039
ORF1ab/nsp124A4VgCagTa11AY.290.000016
ORF1ab/nsp124A4VgCagTa11AY.34.10.00051
ORF1ab/nsp124A4VgCagTa11AY.410.000294
ORF1ab/nsp124A4VgCagTa11AY.46.60.000072
ORF1ab/nsp124A4VgCagTa11AY.5.30.000337
ORF1ab/nsp124A4VgCagTa11AY.570.000656
ORF1ab/nsp124A4VgCagTa11AY.60.000041
ORF1ab/nsp124A4VgCagTa11AY.680.000274
ORF1ab/nsp124A4VgCagTa11AY.75.10.00018
ORF1ab/nsp124A4VgCagTa11AY.820.001357
ORF1ab/nsp124A4VgCagTa11AY.910.00073
ORF1ab/nsp124A4VgCagTa11B.1.1.1110.014706
ORF1ab/nsp124A4VgCagTa11B.1.1.2140.000055
ORF1ab/nsp124A4VgCagTa11B.1.1.330.000421
ORF1ab/nsp124A4VgCagTa11B.1.1.4180.022727
ORF1ab/nsp124A4VgCagTa11B.1.1.500.000679
ORF1ab/nsp124A4VgCagTa11B.1.1.5260.003546
ORF1ab/nsp124A4VgCagTa11B.1.1570.002985
ORF1ab/nsp124A4VgCagTa11B.1.160.300.002976
ORF1ab/nsp124A4VgCagTa11B.1.177.440.000519
ORF1ab/nsp124A4VgCagTa11B.1.177.560.000668
ORF1ab/nsp124A4VgCagTa11B.1.177.870.000728
ORF1ab/nsp124A4VgCagTa11B.1.1920.009259
ORF1ab/nsp124A4VgCagTa11B.1.214.20.0006
ORF1ab/nsp124A4VgCagTa11B.1.2210.000071
ORF1ab/nsp124A4VgCagTa11B.1.221.20.004016
ORF1ab/nsp124A4VgCagTa11B.1.2430.00007
ORF1ab/nsp124A4VgCagTa11B.1.258.110.000396
ORF1ab/nsp124A4VgCagTa11B.1.3110.000275
ORF1ab/nsp124A4VgCagTa11B.1.36.360.000602
ORF1ab/nsp124A4VgCagTa11B.1.36.390.002217
ORF1ab/nsp124A4VgCagTa11B.1.5170.000427
ORF1ab/nsp124A4VgCagTa11B.1.5610.000397
ORF1ab/nsp124A4VgCagTa11B.1.5800.004065
ORF1ab/nsp124A4VgCagTa11B.1.6050.005952
ORF1ab/nsp124A4VgCagTa11B.1.617.10.000129
ORF1ab/nsp124A4VgCagTa11C.37.10.002618
ORF1ab/nsp124A4VgCagTa11D.20.000075
ORF1ab/nsp124A4VgCagTa11P.1.140.000048
ORF1ab/nsp124A4VgCagTa11P.1.70.000319
ORF1ab/nsp124A4VgCagTa11P.20.000187
ORF1ab/nsp124A4VgCagTa11Q.70.001111