CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A443S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12443A443SA4835SnonsynGctTct244624450.99959114767-14769
ORF1ab/nsp12443A443SA4835SnonsynGcTTcG244610.00040883114767-14769

Details of the mutation A443S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12443A443SGctTct24452446All0.000468
ORF1ab/nsp12443A443SGcTTcG12446All0
ORF1ab/nsp12443A443SGctTct18861886B.1.1.1760.828647
ORF1ab/nsp12443A443SGctTct217217B.1.1.70.000194
ORF1ab/nsp12443A443SGctTct155155B.1.1770.002041
ORF1ab/nsp12443A443SGctTct2020B.1.2580.001331
ORF1ab/nsp12443A443SGctTct1818B.1.10.000327
ORF1ab/nsp12443A443SGctTct1313B.10.000119
ORF1ab/nsp12443A443SGctTct1313B.1.177.440.006746
ORF1ab/nsp12443A443SGctTct99AY.40.000014
ORF1ab/nsp12443A443SGctTct88AY.440.000049
ORF1ab/nsp12443A443SGctTct88B.1.1.3180.002414
ORF1ab/nsp12443A443SGctTct77AS.10.066667
ORF1ab/nsp12443A443SGctTct77AY.390.000173
ORF1ab/nsp12443A443SGctTct77B.1.1.390.003568
ORF1ab/nsp12443A443SGctTct66AY.430.000027
ORF1ab/nsp12443A443SGctTct55AY.200.000194
ORF1ab/nsp12443A443SGctTct55B.1.1.3590.138889
ORF1ab/nsp12443A443SGctTct55B.1.617.20.000019
ORF1ab/nsp12443A443SGctTct44B.1.20.000035
ORF1ab/nsp12443A443SGctTct33AY.9.20.00011
ORF1ab/nsp12443A443SGctTct33B.1.1.5190.000119
ORF1ab/nsp12443A443SGctTct120.055556
ORF1ab/nsp12443A443SGcTTcG120.055556
ORF1ab/nsp12443A443SGctTct22AY.1020.000053
ORF1ab/nsp12443A443SGctTct22AY.340.000194
ORF1ab/nsp12443A443SGctTct22AY.450.000243
ORF1ab/nsp12443A443SGctTct22AY.46.40.000329
ORF1ab/nsp12443A443SGctTct22AY.60.000082
ORF1ab/nsp12443A443SGctTct22B.1.1.1010.02
ORF1ab/nsp12443A443SGctTct22B.1.177.120.000303
ORF1ab/nsp12443A443SGctTct22B.1.36.180.00084
ORF1ab/nsp12443A443SGctTct22D.20.00015
ORF1ab/nsp12443A443SGctTct22P.1.10.000635
ORF1ab/nsp12443A443SGctTct11AY.1030.000006
ORF1ab/nsp12443A443SGctTct11AY.1070.000466
ORF1ab/nsp12443A443SGctTct11AY.1080.001103
ORF1ab/nsp12443A443SGctTct11AY.290.000016
ORF1ab/nsp12443A443SGctTct11AY.30.00001
ORF1ab/nsp12443A443SGctTct11AY.300.000396
ORF1ab/nsp12443A443SGctTct11AY.4.20.000022
ORF1ab/nsp12443A443SGctTct11AY.420.00004
ORF1ab/nsp12443A443SGctTct11AY.50.000021
ORF1ab/nsp12443A443SGctTct11AY.5.30.000337
ORF1ab/nsp12443A443SGctTct11AY.700.000209
ORF1ab/nsp12443A443SGctTct11AY.750.000056
ORF1ab/nsp12443A443SGctTct11B.1.1.100.001115
ORF1ab/nsp12443A443SGctTct11B.1.1.250.000569
ORF1ab/nsp12443A443SGctTct11B.1.1.280.000311
ORF1ab/nsp12443A443SGctTct11B.1.1.2940.001266
ORF1ab/nsp12443A443SGctTct11B.1.1.3030.002762
ORF1ab/nsp12443A443SGctTct11B.1.177.170.000821
ORF1ab/nsp12443A443SGctTct11B.1.360.000146
ORF1ab/nsp12443A443SGctTct11B.1.3960.000706
ORF1ab/nsp12443A443SGctTct11B.1.4000.000429
ORF1ab/nsp12443A443SGctTct11B.1.5250.000113
ORF1ab/nsp12443A443SGctTct11B.1.5260.000024
ORF1ab/nsp12443A443SGctTct11B.400.000364
ORF1ab/nsp12443A443SGctTct11P.10.000016