CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A399del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12399A399delA4791deldelGCT---4040114635-14637

Details of the mutation A399del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12399A399delGCT---4040All0.000008
ORF1ab/nsp12399A399delGCT---1919B.1.1.70.000017
ORF1ab/nsp12399A399delGCT---22B.1.617.20.000008
ORF1ab/nsp12399A399delGCT---11AY.1000.000046
ORF1ab/nsp12399A399delGCT---11AY.1110.000183
ORF1ab/nsp12399A399delGCT---11AY.250.000006
ORF1ab/nsp12399A399delGCT---11AY.40.000002
ORF1ab/nsp12399A399delGCT---11AY.4.50.000107
ORF1ab/nsp12399A399delGCT---11AY.46.20.000635
ORF1ab/nsp12399A399delGCT---11AY.680.000274
ORF1ab/nsp12399A399delGCT---11AY.90.000068
ORF1ab/nsp12399A399delGCT---11AY.9.20.000037
ORF1ab/nsp12399A399delGCT---11AY.99.10.001553
ORF1ab/nsp12399A399delGCT---11B.1.10.000018
ORF1ab/nsp12399A399delGCT---11B.1.1.3060.000438
ORF1ab/nsp12399A399delGCT---11B.1.1.460.004367
ORF1ab/nsp12399A399delGCT---11B.1.1600.000031
ORF1ab/nsp12399A399delGCT---11B.1.177.160.000664
ORF1ab/nsp12399A399delGCT---11B.1.177.540.000606
ORF1ab/nsp12399A399delGCT---11B.1.2210.000071
ORF1ab/nsp12399A399delGCT---11B.1.2580.000067
ORF1ab/nsp12399A399delGCT---11B.1.5610.000397