CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A379V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12379A379VA4771VnonsyngCtgTt181618150.99944914575-14577
ORF1ab/nsp12379A379VA4771VnonsyngCTgTC181610.00055066114575-14577

Details of the mutation A379V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12379A379VgCtgTt18151816All0.000347
ORF1ab/nsp12379A379VgCTgTC11816All0
ORF1ab/nsp12379A379VgCtgTt248248AY.40.000386
ORF1ab/nsp12379A379VgCtgTt204204B.1.1.70.000183
ORF1ab/nsp12379A379VgCtgTt153153AY.250.00092
ORF1ab/nsp12379A379VgCtgTt116116AY.1020.003076
ORF1ab/nsp12379A379VgCtgTt108108B.1.617.20.000407
ORF1ab/nsp12379A379VgCtgTt9393B.1.6030.989362
ORF1ab/nsp12379A379VgCtgTt7979AY.570.051837
ORF1ab/nsp12379A379VgCtgTt7474B.1.20.000652
ORF1ab/nsp12379A379VgCtgTt5252AY.430.00023
ORF1ab/nsp12379A379VgCtgTt4444AY.440.000268
ORF1ab/nsp12379A379VgCtgTt4242AY.30.000418
ORF1ab/nsp12379A379VgCtgTt4141B.10.000376
ORF1ab/nsp12379A379VgCtgTt3535B.1.2650.044473
ORF1ab/nsp12379A379VgCtgTt2525AY.1000.00115
ORF1ab/nsp12379A379VgCtgTt2424AY.99.20.002212
ORF1ab/nsp12379A379VgCtgTt2424B.1.5260.000564
ORF1ab/nsp12379A379VgCtgTt2222AY.1030.000137
ORF1ab/nsp12379A379VgCtgTt2222AY.3.10.001876
ORF1ab/nsp12379A379VgCtgTt2222B.1.10.000399
ORF1ab/nsp12379A379VgCtgTt2121P.20.003919
ORF1ab/nsp12379A379VgCtgTt1818AY.290.000284
ORF1ab/nsp12379A379VgCtgTt1818AY.390.000445
ORF1ab/nsp12379A379VgCtgTt1616B.1.4290.000376
ORF1ab/nsp12379A379VgCtgTt1414B.1.1.3160.012951
ORF1ab/nsp12379A379VgCtgTt1213B.1.1770.000158
ORF1ab/nsp12379A379VgCTgTC113B.1.1770.000013
ORF1ab/nsp12379A379VgCtgTt1111AY.190.012543
ORF1ab/nsp12379A379VgCtgTt1111B.1.1.4340.003834
ORF1ab/nsp12379A379VgCtgTt99AY.1130.001282
ORF1ab/nsp12379A379VgCtgTt99B.1.5950.002349
ORF1ab/nsp12379A379VgCtgTt88AY.50.000165
ORF1ab/nsp12379A379VgCtgTt88B.1.4270.000404
ORF1ab/nsp12379A379VgCtgTt77AY.1060.002344
ORF1ab/nsp12379A379VgCtgTt77AY.420.000282
ORF1ab/nsp12379A379VgCtgTt66AY.450.00073
ORF1ab/nsp12379A379VgCtgTt66D.20.00045
ORF1ab/nsp12379A379VgCtgTt66P.10.000095
ORF1ab/nsp12379A379VgCtgTt55AY.330.000334
ORF1ab/nsp12379A379VgCtgTt55B.1.1.2140.000277
ORF1ab/nsp12379A379VgCtgTt55B.1.1600.000156
ORF1ab/nsp12379A379VgCtgTt55B.1.177.870.003639
ORF1ab/nsp12379A379VgCtgTt44AY.1180.000251
ORF1ab/nsp12379A379VgCtgTt44AY.1190.000141
ORF1ab/nsp12379A379VgCtgTt44AY.1200.000149
ORF1ab/nsp12379A379VgCtgTt44AY.39.10.000158
ORF1ab/nsp12379A379VgCtgTt44AY.4.20.000087
ORF1ab/nsp12379A379VgCtgTt44AY.460.000416
ORF1ab/nsp12379A379VgCtgTt44AY.790.004843
ORF1ab/nsp12379A379VgCtgTt44AY.98.10.000194
ORF1ab/nsp12379A379VgCtgTt33AY.230.000209
ORF1ab/nsp12379A379VgCtgTt33AY.260.000085
ORF1ab/nsp12379A379VgCtgTt33AY.4.30.002525
ORF1ab/nsp12379A379VgCtgTt33AY.470.000093
ORF1ab/nsp12379A379VgCtgTt33AY.90.000203
ORF1ab/nsp12379A379VgCtgTt33B.1.1.3180.000905
ORF1ab/nsp12379A379VgCtgTt33B.1.1.5190.000119
ORF1ab/nsp12379A379VgCtgTt33B.1.177.860.00055
ORF1ab/nsp12379A379VgCtgTt33B.1.2340.000396
ORF1ab/nsp12379A379VgCtgTt33B.1.36.390.006652
ORF1ab/nsp12379A379VgCtgTt33B.1.5250.000339
ORF1ab/nsp12379A379VgCtgTt22AY.1110.000366
ORF1ab/nsp12379A379VgCtgTt22AY.1140.000462
ORF1ab/nsp12379A379VgCtgTt22AY.1170.000169
ORF1ab/nsp12379A379VgCtgTt22AY.140.000176
ORF1ab/nsp12379A379VgCtgTt22AY.220.004184
ORF1ab/nsp12379A379VgCtgTt22AY.270.000129
ORF1ab/nsp12379A379VgCtgTt22AY.4.50.000215
ORF1ab/nsp12379A379VgCtgTt22AY.46.60.000144
ORF1ab/nsp12379A379VgCtgTt22AY.540.000191
ORF1ab/nsp12379A379VgCtgTt22AY.590.001059
ORF1ab/nsp12379A379VgCtgTt22AY.750.000112
ORF1ab/nsp12379A379VgCtgTt22B.1.1.250.001137
ORF1ab/nsp12379A379VgCtgTt22B.1.1.280.000622
ORF1ab/nsp12379A379VgCtgTt22B.1.177.440.001038
ORF1ab/nsp12379A379VgCtgTt22B.1.177.540.001213
ORF1ab/nsp12379A379VgCtgTt22B.1.177.600.000437
ORF1ab/nsp12379A379VgCtgTt22B.1.2210.000142
ORF1ab/nsp12379A379VgCtgTt22B.1.2400.000431
ORF1ab/nsp12379A379VgCtgTt22B.1.258.170.000208
ORF1ab/nsp12379A379VgCtgTt22B.1.36.290.001035
ORF1ab/nsp12379A379VgCtgTt22B.1.5610.000794
ORF1ab/nsp12379A379VgCtgTt22B.1.5960.000174
ORF1ab/nsp12379A379VgCtgTt22B.1.617.10.000258
ORF1ab/nsp12379A379VgCtgTt22B.1.6190.001742
ORF1ab/nsp12379A379VgCtgTt22B.1.6210.000177
ORF1ab/nsp12379A379VgCtgTt22B.1.6370.000146
ORF1ab/nsp12379A379VgCtgTt22B.400.000729
ORF1ab/nsp12379A379VgCtgTt22C.370.000232
ORF1ab/nsp12379A379VgCtgTt22Q.40.00091
ORF1ab/nsp12379A379VgCtgTt11AY.1070.000466
ORF1ab/nsp12379A379VgCtgTt11AY.1160.000287
ORF1ab/nsp12379A379VgCtgTt11AY.120.10.000321
ORF1ab/nsp12379A379VgCtgTt11AY.1210.000135
ORF1ab/nsp12379A379VgCtgTt11AY.200.000039
ORF1ab/nsp12379A379VgCtgTt11AY.46.20.000635
ORF1ab/nsp12379A379VgCtgTt11AY.46.40.000165
ORF1ab/nsp12379A379VgCtgTt11AY.46.50.000198
ORF1ab/nsp12379A379VgCtgTt11AY.480.000465
ORF1ab/nsp12379A379VgCtgTt11AY.530.000288
ORF1ab/nsp12379A379VgCtgTt11AY.580.000907
ORF1ab/nsp12379A379VgCtgTt11AY.60.000041
ORF1ab/nsp12379A379VgCtgTt11AY.610.000105
ORF1ab/nsp12379A379VgCtgTt11AY.80.000606
ORF1ab/nsp12379A379VgCtgTt11AY.930.000273
ORF1ab/nsp12379A379VgCtgTt11AZ.30.00152
ORF1ab/nsp12379A379VgCtgTt11B0.000128
ORF1ab/nsp12379A379VgCtgTt11B.1.1.10.000327
ORF1ab/nsp12379A379VgCtgTt11B.1.1.1890.001513
ORF1ab/nsp12379A379VgCtgTt11B.1.1.1920.002309
ORF1ab/nsp12379A379VgCtgTt11B.1.1.2510.007937
ORF1ab/nsp12379A379VgCtgTt11B.1.1.2580.003257
ORF1ab/nsp12379A379VgCtgTt11B.1.1.2650.003155
ORF1ab/nsp12379A379VgCtgTt11B.1.1.2840.000107
ORF1ab/nsp12379A379VgCtgTt11B.1.1.3170.000412
ORF1ab/nsp12379A379VgCtgTt11B.1.1.3260.001761
ORF1ab/nsp12379A379VgCtgTt11B.1.1.330.000421
ORF1ab/nsp12379A379VgCtgTt11B.1.1.370.000193
ORF1ab/nsp12379A379VgCtgTt11B.1.1.3850.004464
ORF1ab/nsp12379A379VgCtgTt11B.1.1040.00369
ORF1ab/nsp12379A379VgCtgTt11B.1.177.430.001477
ORF1ab/nsp12379A379VgCtgTt11B.1.177.90.001332
ORF1ab/nsp12379A379VgCtgTt11B.1.2360.002053
ORF1ab/nsp12379A379VgCtgTt11B.1.2430.00007
ORF1ab/nsp12379A379VgCtgTt11B.1.2580.000067
ORF1ab/nsp12379A379VgCtgTt11B.1.2790.000514
ORF1ab/nsp12379A379VgCtgTt11B.1.3200.001245
ORF1ab/nsp12379A379VgCtgTt11B.1.3500.002933
ORF1ab/nsp12379A379VgCtgTt11B.1.3510.00003
ORF1ab/nsp12379A379VgCtgTt11B.1.360.000146
ORF1ab/nsp12379A379VgCtgTt11B.1.36.10.00114
ORF1ab/nsp12379A379VgCtgTt11B.1.3810.007812
ORF1ab/nsp12379A379VgCtgTt11B.1.4000.000429
ORF1ab/nsp12379A379VgCtgTt11B.1.4220.000812
ORF1ab/nsp12379A379VgCtgTt11B.1.517.10.005263
ORF1ab/nsp12379A379VgCtgTt11B.1.5600.00463
ORF1ab/nsp12379A379VgCtgTt11B.1.5660.019231
ORF1ab/nsp12379A379VgCtgTt11B.1.5750.000303
ORF1ab/nsp12379A379VgCtgTt11B.1.6060.006024
ORF1ab/nsp12379A379VgCtgTt11B.1.6100.003546
ORF1ab/nsp12379A379VgCtgTt11B.1.6280.000352
ORF1ab/nsp12379A379VgCtgTt11B.390.002331
ORF1ab/nsp12379A379VgCtgTt11C.36.30.000567
ORF1ab/nsp12379A379VgCtgTt11P.1.150.000232
ORF1ab/nsp12379A379VgCtgTt11Q.10.000126
ORF1ab/nsp12379A379VgCtgTt11Q.80.000165
ORF1ab/nsp12379A379VgCtgTt11R.10.00009