CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A311S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12311A311SA4703SnonsynGcaTca45724572114371-14373

Details of the mutation A311S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12311A311SGcaTca45724572All0.000874
ORF1ab/nsp12311A311SGcaTca996996AY.40.00155
ORF1ab/nsp12311A311SGcaTca575575B.1.1.70.000515
ORF1ab/nsp12311A311SGcaTca575575B.1.617.20.002165
ORF1ab/nsp12311A311SGcaTca554554AY.430.002454
ORF1ab/nsp12311A311SGcaTca418418B.1.1.3160.386679
ORF1ab/nsp12311A311SGcaTca129129AY.30.001283
ORF1ab/nsp12311A311SGcaTca128128AY.420.005149
ORF1ab/nsp12311A311SGcaTca9797AY.260.002746
ORF1ab/nsp12311A311SGcaTca8383AY.620.036166
ORF1ab/nsp12311A311SGcaTca6969R.21
ORF1ab/nsp12311A311SGcaTca5050AY.440.000304
ORF1ab/nsp12311A311SGcaTca4848AY.390.001186
ORF1ab/nsp12311A311SGcaTca4343AY.90.002907
ORF1ab/nsp12311A311SGcaTca4141AY.1030.000255
ORF1ab/nsp12311A311SGcaTca3838B.10.000348
ORF1ab/nsp12311A311SGcaTca3434AY.250.000205
ORF1ab/nsp12311A311SGcaTca2626AY.290.00041
ORF1ab/nsp12311A311SGcaTca2525AY.1000.00115
ORF1ab/nsp12311A311SGcaTca2323AY.60.000946
ORF1ab/nsp12311A311SGcaTca2222AY.200.000855
ORF1ab/nsp12311A311SGcaTca2121B.1.1600.000655
ORF1ab/nsp12311A311SGcaTca2121B.1.20.000185
ORF1ab/nsp12311A311SGcaTca1919AY.460.001978
ORF1ab/nsp12311A311SGcaTca1919B.1.1.3450.826087
ORF1ab/nsp12311A311SGcaTca1919B.1.1.5190.000755
ORF1ab/nsp12311A311SGcaTca1919B.1.1770.00025
ORF1ab/nsp12311A311SGcaTca1919B.1.4290.000447
ORF1ab/nsp12311A311SGcaTca1818B.1.10.000327
ORF1ab/nsp12311A311SGcaTca1818C.360.016393
ORF1ab/nsp12311A311SGcaTca1717AY.1200.000632
ORF1ab/nsp12311A311SGcaTca1717AY.230.001186
ORF1ab/nsp12311A311SGcaTca1212B.1.177.240.015544
ORF1ab/nsp12311A311SGcaTca1212B.1.3780.082192
ORF1ab/nsp12311A311SGcaTca1111AY.50.000227
ORF1ab/nsp12311A311SGcaTca1111B.1.177.860.002018
ORF1ab/nsp12311A311SGcaTca1111B.1.3510.000327
ORF1ab/nsp12311A311SGcaTca1111B.1.5260.000259
ORF1ab/nsp12311A311SGcaTca1010AY.1190.000353
ORF1ab/nsp12311A311SGcaTca1010AY.120.10.00321
ORF1ab/nsp12311A311SGcaTca1010AY.1210.001353
ORF1ab/nsp12311A311SGcaTca99A.190.084906
ORF1ab/nsp12311A311SGcaTca99AY.3.10.000767
ORF1ab/nsp12311A311SGcaTca99AY.330.000601
ORF1ab/nsp12311A311SGcaTca99AY.98.10.000436
ORF1ab/nsp12311A311SGcaTca88B.1.1.2790.008969
ORF1ab/nsp12311A311SGcaTca77AY.4.2.10.001043
ORF1ab/nsp12311A311SGcaTca77B.1.1.3910.059829
ORF1ab/nsp12311A311SGcaTca77P.10.00011
ORF1ab/nsp12311A311SGcaTca77Q.30.001015
ORF1ab/nsp12311A311SGcaTca77Q.80.001154
ORF1ab/nsp12311A311SGcaTca66AY.29.10.001323
ORF1ab/nsp12311A311SGcaTca66AY.410.001764
ORF1ab/nsp12311A311SGcaTca66C.370.000696
ORF1ab/nsp12311A311SGcaTca55AY.5.40.001384
ORF1ab/nsp12311A311SGcaTca55AY.99.20.000461
ORF1ab/nsp12311A311SGcaTca55B.1.1.3060.002192
ORF1ab/nsp12311A311SGcaTca55B.1.1.3540.02193
ORF1ab/nsp12311A311SGcaTca44AY.1020.000106
ORF1ab/nsp12311A311SGcaTca44AY.1130.00057
ORF1ab/nsp12311A311SGcaTca44AY.39.10.000158
ORF1ab/nsp12311A311SGcaTca44AY.450.000487
ORF1ab/nsp12311A311SGcaTca44AY.910.002922
ORF1ab/nsp12311A311SGcaTca44B.1.360.000584
ORF1ab/nsp12311A311SGcaTca44B.1.4000.001716
ORF1ab/nsp12311A311SGcaTca33AY.1090.002219
ORF1ab/nsp12311A311SGcaTca33AY.1110.000549
ORF1ab/nsp12311A311SGcaTca33AY.1170.000254
ORF1ab/nsp12311A311SGcaTca33AY.360.000445
ORF1ab/nsp12311A311SGcaTca33AY.4.20.000065
ORF1ab/nsp12311A311SGcaTca33AY.46.60.000217
ORF1ab/nsp12311A311SGcaTca33AY.5.30.001012
ORF1ab/nsp12311A311SGcaTca33AY.730.001996
ORF1ab/nsp12311A311SGcaTca33AY.850.001282
ORF1ab/nsp12311A311SGcaTca33B0.000383
ORF1ab/nsp12311A311SGcaTca33B.1.1.2940.003797
ORF1ab/nsp12311A311SGcaTca33B.1.2210.000213
ORF1ab/nsp12311A311SGcaTca33B.1.2340.000396
ORF1ab/nsp12311A311SGcaTca33B.1.36.290.001552
ORF1ab/nsp12311A311SGcaTca33B.1.4990.003151
ORF1ab/nsp12311A311SGcaTca33B.1.5960.000261
ORF1ab/nsp12311A311SGcaTca33B.1.617.10.000387
ORF1ab/nsp12311A311SGcaTca33B.400.001093
ORF1ab/nsp12311A311SGcaTca33P.1.140.000143
ORF1ab/nsp12311A311SGcaTca22AY.1050.001286
ORF1ab/nsp12311A311SGcaTca22AY.1160.000574
ORF1ab/nsp12311A311SGcaTca22AY.270.000129
ORF1ab/nsp12311A311SGcaTca22AY.610.00021
ORF1ab/nsp12311A311SGcaTca22AY.75.10.000361
ORF1ab/nsp12311A311SGcaTca22AY.9.20.000073
ORF1ab/nsp12311A311SGcaTca22B.1.1.2200.003717
ORF1ab/nsp12311A311SGcaTca22B.1.1.4320.002532
ORF1ab/nsp12311A311SGcaTca22B.1.1.4480.004065
ORF1ab/nsp12311A311SGcaTca22B.1.177.350.001382
ORF1ab/nsp12311A311SGcaTca22B.1.177.850.01087
ORF1ab/nsp12311A311SGcaTca22B.1.2580.000133
ORF1ab/nsp12311A311SGcaTca22B.1.351.20.000605
ORF1ab/nsp12311A311SGcaTca22B.1.3690.00057
ORF1ab/nsp12311A311SGcaTca22B.1.5890.015152
ORF1ab/nsp12311A311SGcaTca22B.1.6090.000959
ORF1ab/nsp12311A311SGcaTca22B.1.6210.000177
ORF1ab/nsp12311A311SGcaTca11A.23.10.000704
ORF1ab/nsp12311A311SGcaTca11AD.20.000219
ORF1ab/nsp12311A311SGcaTca11AY.1010.00049
ORF1ab/nsp12311A311SGcaTca11AY.1070.000466
ORF1ab/nsp12311A311SGcaTca11AY.1140.000231
ORF1ab/nsp12311A311SGcaTca11AY.1180.000063
ORF1ab/nsp12311A311SGcaTca11AY.4.50.000107
ORF1ab/nsp12311A311SGcaTca11AY.400.000964
ORF1ab/nsp12311A311SGcaTca11AY.46.40.000165
ORF1ab/nsp12311A311SGcaTca11AY.520.000814
ORF1ab/nsp12311A311SGcaTca11AY.530.000288
ORF1ab/nsp12311A311SGcaTca11AY.540.000095
ORF1ab/nsp12311A311SGcaTca11AY.580.000907
ORF1ab/nsp12311A311SGcaTca11AY.670.000464
ORF1ab/nsp12311A311SGcaTca11AY.750.000056
ORF1ab/nsp12311A311SGcaTca11AY.820.001357
ORF1ab/nsp12311A311SGcaTca11AY.890.004902
ORF1ab/nsp12311A311SGcaTca11AY.9.10.000084
ORF1ab/nsp12311A311SGcaTca11AY.920.000287
ORF1ab/nsp12311A311SGcaTca11AY.980.000079
ORF1ab/nsp12311A311SGcaTca11AY.990.001049
ORF1ab/nsp12311A311SGcaTca11B.1.1.1740.003378
ORF1ab/nsp12311A311SGcaTca11B.1.1.3040.002809
ORF1ab/nsp12311A311SGcaTca11B.1.1.3400.045455
ORF1ab/nsp12311A311SGcaTca11B.1.1.3930.111111
ORF1ab/nsp12311A311SGcaTca11B.1.1.5170.006803
ORF1ab/nsp12311A311SGcaTca11B.1.1.610.008772
ORF1ab/nsp12311A311SGcaTca11B.1.1.700.000341
ORF1ab/nsp12311A311SGcaTca11B.1.110.30.000718
ORF1ab/nsp12311A311SGcaTca11B.1.177.420.000894
ORF1ab/nsp12311A311SGcaTca11B.1.177.560.000668
ORF1ab/nsp12311A311SGcaTca11B.1.221.10.002907
ORF1ab/nsp12311A311SGcaTca11B.1.2430.00007
ORF1ab/nsp12311A311SGcaTca11B.1.3110.000275
ORF1ab/nsp12311A311SGcaTca11B.1.36.220.001208
ORF1ab/nsp12311A311SGcaTca11B.1.3800.006623
ORF1ab/nsp12311A311SGcaTca11B.1.4160.001269
ORF1ab/nsp12311A311SGcaTca11B.1.438.10.000107
ORF1ab/nsp12311A311SGcaTca11B.1.4680.005714
ORF1ab/nsp12311A311SGcaTca11B.1.5170.000427
ORF1ab/nsp12311A311SGcaTca11B.1.5400.009709
ORF1ab/nsp12311A311SGcaTca11B.1.6000.005848
ORF1ab/nsp12311A311SGcaTca11B.1.6370.000073
ORF1ab/nsp12311A311SGcaTca11B.40.002208
ORF1ab/nsp12311A311SGcaTca11B.4.70.010101
ORF1ab/nsp12311A311SGcaTca11B.460.020833
ORF1ab/nsp12311A311SGcaTca11C.1.20.004255
ORF1ab/nsp12311A311SGcaTca11C.110.010638
ORF1ab/nsp12311A311SGcaTca11C.140.004329
ORF1ab/nsp12311A311SGcaTca11C.180.002591
ORF1ab/nsp12311A311SGcaTca11C.30.007634
ORF1ab/nsp12311A311SGcaTca11C.36.30.000567
ORF1ab/nsp12311A311SGcaTca11D.20.000075
ORF1ab/nsp12311A311SGcaTca11P.1.150.000232
ORF1ab/nsp12311A311SGcaTca11P.20.000187
ORF1ab/nsp12311A311SGcaTca11P.30.001595
ORF1ab/nsp12311A311SGcaTca11R.10.00009