CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A253S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12253A253SA4645SnonsynGcaTca156156114197-14199

Details of the mutation A253S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12253A253SGcaTca156156All0.00003
ORF1ab/nsp12253A253SGcaTca6060D.20.004502
ORF1ab/nsp12253A253SGcaTca2626AY.250.000156
ORF1ab/nsp12253A253SGcaTca1010P.1.70.003193
ORF1ab/nsp12253A253SGcaTca99B.10.000082
ORF1ab/nsp12253A253SGcaTca77B.1.10.000127
ORF1ab/nsp12253A253SGcaTca66B.1.1.70.000005
ORF1ab/nsp12253A253SGcaTca44AY.40.000006
ORF1ab/nsp12253A253SGcaTca22A.20.001324
ORF1ab/nsp12253A253SGcaTca22AY.1020.000053
ORF1ab/nsp12253A253SGcaTca22AY.290.000032
ORF1ab/nsp12253A253SGcaTca22AY.420.00008
ORF1ab/nsp12253A253SGcaTca22B.1.1770.000026
ORF1ab/nsp12253A253SGcaTca22B.1.2340.000264
ORF1ab/nsp12253A253SGcaTca22B.1.4270.000101
ORF1ab/nsp12253A253SGcaTca22B.1.617.20.000008
ORF1ab/nsp12253A253SGcaTca11AY.130.000161
ORF1ab/nsp12253A253SGcaTca11AY.390.000025
ORF1ab/nsp12253A253SGcaTca11AY.440.000006
ORF1ab/nsp12253A253SGcaTca11AY.650.000533
ORF1ab/nsp12253A253SGcaTca11AY.980.000079
ORF1ab/nsp12253A253SGcaTca11B0.000128
ORF1ab/nsp12253A253SGcaTca11B.1.1.3690.000446
ORF1ab/nsp12253A253SGcaTca11B.1.1.5190.00004
ORF1ab/nsp12253A253SGcaTca11B.1.177.260.006993
ORF1ab/nsp12253A253SGcaTca11B.1.177.540.000606
ORF1ab/nsp12253A253SGcaTca11B.1.20.000009
ORF1ab/nsp12253A253SGcaTca11B.1.36.390.002217
ORF1ab/nsp12253A253SGcaTca11B.1.4340.052632
ORF1ab/nsp12253A253SGcaTca11B.1.5230.002451
ORF1ab/nsp12253A253SGcaTca11B.290.003509
ORF1ab/nsp12253A253SGcaTca11B.30.000831
ORF1ab/nsp12253A253SGcaTca11C.10.002392
ORF1ab/nsp12253A253SGcaTca11D.30.005917