CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = A250V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12250A250VA4642VnonsyngCtgTt114611450.99912714188-14190
ORF1ab/nsp12250A250VA4642VnonsyngCTgTC114610.000872614188-14190

Details of the mutation A250V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12250A250VgCtgTt11451146All0.000219
ORF1ab/nsp12250A250VgCTgTC11146All0
ORF1ab/nsp12250A250VgCtgTt366366B.1.1.70.000328
ORF1ab/nsp12250A250VgCtgTt272272AY.40.000423
ORF1ab/nsp12250A250VgCtgTt5252B.1.617.20.000196
ORF1ab/nsp12250A250VgCtgTt3636B.1.5750.010922
ORF1ab/nsp12250A250VgCtgTt3131AY.250.000186
ORF1ab/nsp12250A250VgCtgTt2929B.1.9.10.935484
ORF1ab/nsp12250A250VgCtgTt2727B.10.000247
ORF1ab/nsp12250A250VgCtgTt2424AY.430.000106
ORF1ab/nsp12250A250VgCtgTt1818B.1.4090.014063
ORF1ab/nsp12250A250VgCtgTt1717AY.1030.000106
ORF1ab/nsp12250A250VgCtgTt1717P.10.000268
ORF1ab/nsp12250A250VgCtgTt1515AY.390.000371
ORF1ab/nsp12250A250VgCtgTt1111B.1.10.0002
ORF1ab/nsp12250A250VgCtgTt1010AY.1020.000265
ORF1ab/nsp12250A250VgCtgTt1010B.1.20.000088
ORF1ab/nsp12250A250VgCtgTt99B.1.6210.000797
ORF1ab/nsp12250A250VgCtgTt88B.1.1.3620.044944
ORF1ab/nsp12250A250VgCtgTt77AY.1160.002007
ORF1ab/nsp12250A250VgCtgTt77B.1.1.3160.006475
ORF1ab/nsp12250A250VgCtgTt66AY.30.00006
ORF1ab/nsp12250A250VgCtgTt66AY.440.000037
ORF1ab/nsp12250A250VgCtgTt66AY.80.003636
ORF1ab/nsp12250A250VgCtgTt66B.1.3440.04918
ORF1ab/nsp12250A250VgCtgTt66B.1.3510.000178
ORF1ab/nsp12250A250VgCtgTt66B.400.002186
ORF1ab/nsp12250A250VgCtgTt55AY.3.10.000426
ORF1ab/nsp12250A250VgCtgTt55AY.470.000156
ORF1ab/nsp12250A250VgCtgTt55AY.9.20.000184
ORF1ab/nsp12250A250VgCtgTt55B.1.1.2220.00102
ORF1ab/nsp12250A250VgCtgTt55B.1.6280.001762
ORF1ab/nsp12250A250VgCtgTt44AY.200.000155
ORF1ab/nsp12250A250VgCtgTt44AY.290.000063
ORF1ab/nsp12250A250VgCtgTt44AY.940.001771
ORF1ab/nsp12250A250VgCtgTt44B.1.1770.000053
ORF1ab/nsp12250A250VgCtgTt44B.1.5260.000094
ORF1ab/nsp12250A250VgCtgTt33AY.1190.000106
ORF1ab/nsp12250A250VgCtgTt33AY.980.000237
ORF1ab/nsp12250A250VgCtgTt33B.1.1.1890.004539
ORF1ab/nsp12250A250VgCtgTt33B.1.1.5190.000119
ORF1ab/nsp12250A250VgCtgTt33B.1.1600.000094
ORF1ab/nsp12250A250VgCtgTt33B.1.360.000438
ORF1ab/nsp12250A250VgCtgTt33C.360.002732
ORF1ab/nsp12250A250VgCtgTt33D.20.000225
ORF1ab/nsp12250A250VgCtgTt120.055556
ORF1ab/nsp12250A250VgCTgTC120.055556
ORF1ab/nsp12250A250VgCtgTt22A0.000774
ORF1ab/nsp12250A250VgCtgTt22AY.1000.000092
ORF1ab/nsp12250A250VgCtgTt22AY.1210.000271
ORF1ab/nsp12250A250VgCtgTt22AY.260.000057
ORF1ab/nsp12250A250VgCtgTt22AY.340.000194
ORF1ab/nsp12250A250VgCtgTt22AY.420.00008
ORF1ab/nsp12250A250VgCtgTt22AY.50.000041
ORF1ab/nsp12250A250VgCtgTt22B.1.1.1530.002191
ORF1ab/nsp12250A250VgCtgTt22B.1.177.570.000562
ORF1ab/nsp12250A250VgCtgTt22B.1.2340.000264
ORF1ab/nsp12250A250VgCtgTt22B.1.258.170.000208
ORF1ab/nsp12250A250VgCtgTt22B.1.3850.021277
ORF1ab/nsp12250A250VgCtgTt22B.1.5250.000226
ORF1ab/nsp12250A250VgCtgTt22B.1.6230.001073
ORF1ab/nsp12250A250VgCtgTt22P.1.140.000096
ORF1ab/nsp12250A250VgCtgTt22P.1.170.000324
ORF1ab/nsp12250A250VgCtgTt22Q.10.000253
ORF1ab/nsp12250A250VgCtgTt11A.20.000662
ORF1ab/nsp12250A250VgCtgTt11A.50.001923
ORF1ab/nsp12250A250VgCtgTt11AY.10.000396
ORF1ab/nsp12250A250VgCtgTt11AY.1170.000085
ORF1ab/nsp12250A250VgCtgTt11AY.1180.000063
ORF1ab/nsp12250A250VgCtgTt11AY.1200.000037
ORF1ab/nsp12250A250VgCtgTt11AY.120.10.000321
ORF1ab/nsp12250A250VgCtgTt11AY.190.00114
ORF1ab/nsp12250A250VgCtgTt11AY.240.000431
ORF1ab/nsp12250A250VgCtgTt11AY.330.000067
ORF1ab/nsp12250A250VgCtgTt11AY.360.000148
ORF1ab/nsp12250A250VgCtgTt11AY.410.000294
ORF1ab/nsp12250A250VgCtgTt11AY.46.20.000635
ORF1ab/nsp12250A250VgCtgTt11AY.690.000187
ORF1ab/nsp12250A250VgCtgTt11AY.740.000116
ORF1ab/nsp12250A250VgCtgTt11AY.750.000056
ORF1ab/nsp12250A250VgCtgTt11AY.860.00083
ORF1ab/nsp12250A250VgCtgTt11AY.880.000884
ORF1ab/nsp12250A250VgCtgTt11AY.920.000287
ORF1ab/nsp12250A250VgCtgTt11B.1.1.2140.000055
ORF1ab/nsp12250A250VgCtgTt11B.1.1.2160.00089
ORF1ab/nsp12250A250VgCtgTt11B.1.1.4160.000905
ORF1ab/nsp12250A250VgCtgTt11B.1.1.4480.002033
ORF1ab/nsp12250A250VgCtgTt11B.1.1.4870.005587
ORF1ab/nsp12250A250VgCtgTt11B.1.177.40.000211
ORF1ab/nsp12250A250VgCtgTt11B.1.2430.00007
ORF1ab/nsp12250A250VgCtgTt11B.1.2600.003344
ORF1ab/nsp12250A250VgCtgTt11B.1.3110.000275
ORF1ab/nsp12250A250VgCtgTt11B.1.36.310.001751
ORF1ab/nsp12250A250VgCtgTt11B.1.4000.000429
ORF1ab/nsp12250A250VgCtgTt11B.1.438.10.000107
ORF1ab/nsp12250A250VgCtgTt11B.1.5950.000261
ORF1ab/nsp12250A250VgCtgTt11B.1.6120.002653
ORF1ab/nsp12250A250VgCtgTt11B.1.6370.000073
ORF1ab/nsp12250A250VgCtgTt11B.600.015873
ORF1ab/nsp12250A250VgCtgTt11C.370.000116
ORF1ab/nsp12250A250VgCtgTt11P.1.100.000269
ORF1ab/nsp12250A250VgCtgTt11P.20.000187
ORF1ab/nsp12250A250VgCtgTt11R.10.00009