CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 185 | A185V | A4577V | nonsyn | gCt | gTt | 7603 | 7602 | 0.999868 | 13993-13995 |
ORF1ab/nsp12 | 185 | A185V | A4577V | nonsyn | gCT | gTG | 7603 | 1 | 0.000131527 | 13993-13995 |
Details of the mutation A185V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7602 | 7603 | All | 0.001454 |
ORF1ab/nsp12 | 185 | A185V | gCT | gTG | 1 | 7603 | All | 0 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1548 | 1548 | AY.4 | 0.002409 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 961 | 961 | AY.25 | 0.00578 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 790 | 791 | B.1.1.7 | 0.000707 |
ORF1ab/nsp12 | 185 | A185V | gCT | gTG | 1 | 791 | B.1.1.7 | 0.000001 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 455 | 455 | B.1.305 | 0.978495 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 395 | 395 | AY.29 | 0.006231 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 306 | 306 | B.1.617.2 | 0.001152 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 177 | 177 | B.1.2 | 0.001559 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 171 | 171 | AY.103 | 0.001062 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 165 | 165 | B.1.234 | 0.021771 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 163 | 163 | B.1 | 0.001493 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 162 | 162 | AY.39 | 0.004003 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 137 | 137 | B.1.427 | 0.006918 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 136 | 136 | AY.33 | 0.009082 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 116 | 116 | B.1.526 | 0.002727 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 115 | 115 | AY.43 | 0.00051 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 113 | 113 | AY.44 | 0.000688 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 106 | 106 | AY.46.6 | 0.007654 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 89 | 89 | B.1.1.291 | 0.066073 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 70 | 70 | P.1 | 0.001103 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 67 | 67 | B.1.239 | 0.081807 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 66 | 66 | AY.23 | 0.004603 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 53 | 53 | B.1.177 | 0.000698 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 50 | 50 | AY.3 | 0.000497 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 50 | 50 | B.1.36.1 | 0.057013 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 49 | 49 | B.1.1 | 0.000889 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 45 | 45 | AY.71 | 0.021378 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 39 | 39 | AY.102 | 0.001034 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 30 | 30 | AY.47 | 0.000933 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 30 | 30 | B.1.240 | 0.006467 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 26 | 26 | AY.82 | 0.035278 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 24 | 24 | AY.75 | 0.001345 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 24 | 24 | B.1.1.519 | 0.000953 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 23 | 23 | AY.34 | 0.00223 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 23 | 23 | B.1.429 | 0.000541 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 22 | 22 | B.1.595 | 0.005741 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 21 | 21 | B.1.1.318 | 0.006337 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 18 | 18 | B.1.177.21 | 0.001376 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 17 | 17 | B.1.177.81 | 0.003218 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 17 | 17 | B.1.258 | 0.001131 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 16 | 16 | AY.119 | 0.000565 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 16 | 16 | AY.4.5 | 0.00172 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 15 | 15 | AY.20 | 0.000583 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 15 | 15 | B.1.351 | 0.000446 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 14 | 14 | AY.46 | 0.001457 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 14 | 14 | P.1.14 | 0.000669 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 13 | 13 | AY.26 | 0.000368 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 13 | 13 | AY.42 | 0.000523 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 13 | 13 | AY.54 | 0.00124 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 13 | 13 | B.1.1.222 | 0.002652 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 12 | 12 | AY.5 | 0.000248 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 12 | 12 | AY.99.2 | 0.001106 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 11 | 11 | AY.45 | 0.001339 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 11 | 11 | B.1.36 | 0.001605 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 11 | 11 | B.1.530 | 0.078571 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 10 | 10 | AY.109 | 0.007396 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 10 | 10 | B.1.243 | 0.000696 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 10 | 10 | B.1.621 | 0.000885 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 9 | 9 | AY.100 | 0.000414 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 9 | 9 | B.1.1.275 | 0.101124 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 8 | 8 | AY.3.1 | 0.000682 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 8 | 8 | AY.95 | 0.006088 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 8 | 8 | B.1.637 | 0.000585 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7 | 7 | AU.3 | 0.014768 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7 | 7 | AY.120 | 0.00026 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7 | 7 | AY.98 | 0.000553 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7 | 7 | B.1.1.432 | 0.008861 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7 | 7 | B.1.177.8 | 0.005267 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7 | 7 | B.1.221 | 0.000497 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 7 | 7 | B.1.596 | 0.00061 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | A.2.5 | 0.002994 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | AY.121 | 0.000812 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | AY.39.1 | 0.000238 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | AY.59 | 0.003178 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | B.1.1.214 | 0.000333 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | B.1.1.369 | 0.002677 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | B.1.466.2 | 0.002347 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | B.1.525 | 0.000679 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | B.1.617.1 | 0.000774 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 6 | 6 | C.37 | 0.000696 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | AY.113 | 0.000712 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | AY.114 | 0.001156 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | AY.6 | 0.000206 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | AY.93 | 0.001365 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | AY.99.1 | 0.007764 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | B.1.1.273 | 0.033784 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | B.1.1.33 | 0.002104 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | B.1.1.63 | 0.001929 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | B.1.177.4 | 0.001055 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | B.1.177.77 | 0.003631 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 5 | 5 | B.1.346 | 0.006553 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | AY.105 | 0.002572 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | AY.24 | 0.001724 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | AY.28 | 0.007561 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | AY.74 | 0.000463 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | B.1.1.25 | 0.002274 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | B.1.1.317 | 0.001647 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | B.1.177.17 | 0.003284 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | B.1.36.19 | 0.037037 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 4 | 4 | B.1.558 | 0.018265 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.16.1 | 0.00141 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.29.1 | 0.000662 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.34.1 | 0.00153 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.1.207 | 0.003546 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.1.374 | 0.007126 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.1.525 | 0.016393 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.147 | 0.002268 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.177.12 | 0.000455 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.177.37 | 0.081081 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.311 | 0.000824 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.324 | 0.004815 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.369 | 0.000856 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 3 | 3 | C.36.3 | 0.001702 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | A | 0.000774 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.11 | 0.002677 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.46.1 | 0.002053 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.56 | 0.00321 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.1.219 | 0.01 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.1.416 | 0.00181 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.1.521 | 0.010695 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.221.3 | 0.001667 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.36.38 | 0.003284 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.389 | 0.002004 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.564.1 | 0.003155 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.595.1 | 0.011696 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | C.31 | 0.035714 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | C.36.2 | 0.068966 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | L.3 | 0.007092 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | Q.6 | 0.013245 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | A.19 | 0.009434 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AP.1 | 0.001502 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B | 0.000128 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.163 | 0.007634 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.243 | 0.004082 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.304 | 0.002809 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.328 | 0.016949 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.4 | 0.002976 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.442 | 0.018519 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.517 | 0.006803 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.1.98 | 0.018519 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.164 | 0.014925 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.332 | 0.003497 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.333 | 0.010526 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.36.2 | 0.010753 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.379 | 0.017241 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.380 | 0.006623 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.452 | 0.013699 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.589 | 0.007576 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | B.6.1 | 0.026316 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | C.1.1 | 0.076923 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | C.30.1 | 0.006711 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp12 | 185 | A185V | gCt | gTt | 1 | 1 | P.1.16 | 0.000374 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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