CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 913 | S913L | S5305L | nonsyn | tCa | tTa | 2553 | 2550 | 0.998825 | 16177-16179 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2550 | 2553 | All | 0.000488 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 228 | 228 | B.1 | 0.002088 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 212 | 212 | B.1.2 | 0.001867 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 160 | 161 | AY.4 | 0.000249 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 119 | 120 | B.1.617.2 | 0.000448 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 113 | 114 | AY.3 | 0.001124 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 112 | 112 | AY.44 | 0.000682 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 87 | 87 | B.1.1.70 | 0.029673 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 81 | 81 | B.1.1.153 | 0.088719 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 80 | 80 | B.1.177 | 0.001053 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 75 | 75 | AY.25 | 0.000451 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 67 | 67 | P.1 | 0.001056 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 65 | 65 | B.1.429 | 0.001529 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 48 | 48 | AY.103 | 0.000298 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 46 | 46 | AY.43 | 0.000204 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 45 | 45 | B.1.1.7 | 0.00004 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 43 | 43 | AY.120.1 | 0.013804 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 38 | 38 | AY.26 | 0.001076 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 37 | 37 | B.1.526 | 0.00087 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 36 | 36 | AY.119 | 0.001271 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 36 | 36 | B.1.1 | 0.000653 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 29 | 29 | B.1.1.519 | 0.001152 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 24 | 24 | AY.5 | 0.000496 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 20 | 20 | B.1.361 | 0.025773 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 18 | 18 | A | 0.006966 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 17 | 17 | B.1.427 | 0.000858 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 17 | 17 | B.1.617.3 | 0.050746 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 15 | 15 | P.1.14 | 0.000717 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 14 | 14 | AY.14 | 0.001232 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 12 | 12 | AY.29 | 0.000189 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 12 | 12 | B.1.36 | 0.001751 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 12 | 12 | B.1.509 | 0.01039 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 12 | 12 | P.1.7 | 0.003831 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 11 | 11 | AY.39 | 0.000272 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 11 | 11 | AY.46 | 0.001145 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 10 | 10 | AY.102 | 0.000265 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 10 | 10 | B.1.1.306 | 0.004384 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 10 | 10 | B.1.1.392 | 0.526316 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 10 | 10 | P.1.15 | 0.002323 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 10 | 10 | P.1.2 | 0.011561 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 9 | 9 | AY.120 | 0.000335 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 9 | 9 | AY.20 | 0.00035 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 9 | 9 | B.1.1.263 | 0.014019 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 9 | 9 | B.1.1.429 | 0.041475 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 9 | 9 | B.1.177.77 | 0.006536 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 9 | 9 | B.1.177.87 | 0.00655 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 9 | 9 | B.1.221.2 | 0.036145 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 9 | 9 | B.1.499 | 0.009454 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 8 | 8 | AY.117 | 0.000676 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 8 | 8 | AY.74 | 0.000925 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | AY.85 | 0.00299 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | B.1.1.63 | 0.002701 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | B.1.160 | 0.000218 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | B.1.177.21 | 0.000535 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | B.1.596 | 0.00061 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | B.1.617.1 | 0.000903 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | B.1.637 | 0.000512 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 7 | 7 | D.2 | 0.000525 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 6 | 6 | AY.113 | 0.000854 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 6 | 6 | AY.33 | 0.000401 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 6 | 6 | AY.62 | 0.002614 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 6 | 6 | AY.75 | 0.000336 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 6 | 6 | B.1.177.60 | 0.001311 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 6 | 6 | B.1.258.17 | 0.000624 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 6 | 6 | B.1.36.21 | 0.012959 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.42 | 0.000201 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.46.4 | 0.000823 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.61 | 0.000524 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.69 | 0.000933 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.71 | 0.002375 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.93 | 0.001365 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.98.1 | 0.000242 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | AY.99.2 | 0.000461 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | B.1.1.216 | 0.004452 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | B.1.177.16 | 0.003322 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | B.1.177.82 | 0.002387 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 5 | 5 | B.1.438.1 | 0.000536 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | A.5 | 0.007692 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | AW.1 | 0.012195 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | AY.108 | 0.00441 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | AY.4.2 | 0.000087 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | AY.50 | 0.003197 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | AY.92 | 0.001149 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | B.1.1.50 | 0.002716 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | B.40 | 0.001457 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 4 | 4 | P.1.1 | 0.001271 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | AD.2 | 0.000657 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | AY.111 | 0.000549 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | AY.46.6 | 0.000217 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | AY.90 | 0.002053 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B | 0.000383 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.1.284 | 0.000322 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.111 | 0.003525 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.142 | 0.008696 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.206 | 0.002447 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.221 | 0.000213 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.241 | 0.002435 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.375 | 0.002459 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.436 | 0.003086 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | B.4 | 0.006623 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | C.7 | 0.103448 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.39.2 | 0.003082 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.57 | 0.001312 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.1.294 | 0.002532 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.1.524 | 0.041667 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.110.3 | 0.001437 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.128 | 0.001271 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.177.15 | 0.001262 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.214.3 | 0.014286 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.422 | 0.001625 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.428 | 0.002041 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.599 | 0.007299 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.1.9 | 0.012346 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | B.38 | 0.047619 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | A.21 | 0.00277 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AE.2 | 0.058824 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.128 | 0.007092 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.237 | 0.005405 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.394 | 0.02439 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.41 | 0.006329 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.423 | 0.0625 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.424 | 0.045455 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.1.51 | 0.001718 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.131 | 0.008772 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.145 | 0.052632 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.160.26 | 0.002421 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.177.48 | 0.003125 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.251 | 0.021739 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.355 | 0.011111 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | C.13 | 0.025641 |
ORF1ab/nsp12 | 913 | S913L | tCa | tTa | 1 | 1 | C.4 | 0.01 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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