CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 879 & Codon = gaC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12879D879DD5271DsyngaTgaC602602116075-16077

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12879D879DgaTgaC602602All0.000115
ORF1ab/nsp12879D879DgaTgaC224224AY.40.000349
ORF1ab/nsp12879D879DgaTgaC159159C.37.10.41623
ORF1ab/nsp12879D879DgaTgaC4242B.1.4290.000988
ORF1ab/nsp12879D879DgaTgaC3636B.1.1.70.000032
ORF1ab/nsp12879D879DgaTgaC3535B.1.2430.002435
ORF1ab/nsp12879D879DgaTgaC88AY.1180.000501
ORF1ab/nsp12879D879DgaTgaC88AY.30.00008
ORF1ab/nsp12879D879DgaTgaC88B.10.000073
ORF1ab/nsp12879D879DgaTgaC77B.1.617.20.000026
ORF1ab/nsp12879D879DgaTgaC66AY.680.001642
ORF1ab/nsp12879D879DgaTgaC66C.370.000696
ORF1ab/nsp12879D879DgaTgaC55AY.240.002155
ORF1ab/nsp12879D879DgaTgaC55AY.3.10.000426
ORF1ab/nsp12879D879DgaTgaC44AY.9.20.000147
ORF1ab/nsp12879D879DgaTgaC44B.1.3490.002859
ORF1ab/nsp12879D879DgaTgaC33AY.4.20.000065
ORF1ab/nsp12879D879DgaTgaC33B.1.1260.003827
ORF1ab/nsp12879D879DgaTgaC33B.1.177.350.002073
ORF1ab/nsp12879D879DgaTgaC33B.1.2210.000213
ORF1ab/nsp12879D879DgaTgaC33B.1.3510.000089
ORF1ab/nsp12879D879DgaTgaC22AY.670.000929
ORF1ab/nsp12879D879DgaTgaC22AY.770.002255
ORF1ab/nsp12879D879DgaTgaC22B.1.177.750.002081
ORF1ab/nsp12879D879DgaTgaC22B.1.20.000018
ORF1ab/nsp12879D879DgaTgaC22P.10.000032
ORF1ab/nsp12879D879DgaTgaC11AY.1010.00049
ORF1ab/nsp12879D879DgaTgaC11AY.1020.000027
ORF1ab/nsp12879D879DgaTgaC11AY.1170.000085
ORF1ab/nsp12879D879DgaTgaC11AY.1190.000035
ORF1ab/nsp12879D879DgaTgaC11AY.1200.000037
ORF1ab/nsp12879D879DgaTgaC11AY.250.000006
ORF1ab/nsp12879D879DgaTgaC11AY.4.50.000107
ORF1ab/nsp12879D879DgaTgaC11AY.430.000004
ORF1ab/nsp12879D879DgaTgaC11AY.440.000006
ORF1ab/nsp12879D879DgaTgaC11AY.470.000031
ORF1ab/nsp12879D879DgaTgaC11AY.50.000021
ORF1ab/nsp12879D879DgaTgaC11AY.530.000288
ORF1ab/nsp12879D879DgaTgaC11AY.540.000095
ORF1ab/nsp12879D879DgaTgaC11AY.910.00073
ORF1ab/nsp12879D879DgaTgaC11B.1.1.1210.002427
ORF1ab/nsp12879D879DgaTgaC11B.1.1.3480.000796
ORF1ab/nsp12879D879DgaTgaC11B.1.2600.003344
ORF1ab/nsp12879D879DgaTgaC11B.1.3900.010638
ORF1ab/nsp12879D879DgaTgaC11B.1.5250.000113
ORF1ab/nsp12879D879DgaTgaC11B.1.6230.000536