CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 879

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12879D879ND5271NnonsynGatAat1302913029116075-16077
ORF1ab/nsp12879D879YD5271YnonsynGatTat68866886116075-16077
ORF1ab/nsp12879D879GD5271GnonsyngAtgGt909909116075-16077
ORF1ab/nsp12879D879DD5271DsyngaTgaC602602116075-16077
ORF1ab/nsp12879D879delD5271deldelGAT---6666116075-16077
ORF1ab/nsp12879D879AD5271AnonsyngAtgCt4949116075-16077
ORF1ab/nsp12879D879VD5271VnonsyngAtgTt2121116075-16077
ORF1ab/nsp12879D879HD5271HnonsynGatCat99116075-16077
ORF1ab/nsp12879D879del1D5271del1delgaTga-650.83333316075-16077
ORF1ab/nsp12879D879del1D5271del1delGat-at610.16666716075-16077
ORF1ab/nsp12879D879ED5271EnonsyngaTgaA540.816075-16077
ORF1ab/nsp12879D879ED5271EnonsyngaTgaG510.216075-16077
ORF1ab/nsp12879D879del2D5271del2delgATg--22116075-16077
ORF1ab/nsp12879D879CD5271CnonsynGAtTGt11116075-16077
ORF1ab/nsp12879D879TD5271TnonsynGAtACt11116075-16077

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12879D879NGatAat1302913029All0.002492
ORF1ab/nsp12879D879NGatAat1217212172AY.40.018945
ORF1ab/nsp12879D879YGatTat68866886All0.001317
ORF1ab/nsp12879D879YGatTat37013701AY.40.00576
ORF1ab/nsp12879D879GgAtgGt909909All0.000174
ORF1ab/nsp12879D879YGatTat665665B.1.617.20.002504
ORF1ab/nsp12879D879DgaTgaC602602All0.000115
ORF1ab/nsp12879D879NGatAat320320AY.980.025278
ORF1ab/nsp12879D879YGatTat281281B.1.1.70.000252
ORF1ab/nsp12879D879YGatTat237237B.1.1770.003121
ORF1ab/nsp12879D879NGatAat234234B.1.617.20.000881
ORF1ab/nsp12879D879DgaTgaC224224AY.40.000349
ORF1ab/nsp12879D879YGatTat223223AY.1030.001385
ORF1ab/nsp12879D879GgAtgGt185185AY.40.000288
ORF1ab/nsp12879D879GgAtgGt183183B.1.1.2220.037332
ORF1ab/nsp12879D879GgAtgGt165165B.1.1.70.000148
ORF1ab/nsp12879D879DgaTgaC159159C.37.10.41623
ORF1ab/nsp12879D879YGatTat109109AY.430.000483
ORF1ab/nsp12879D879NGatAat108108AY.430.000478
ORF1ab/nsp12879D879YGatTat9696B.1.3510.002854
ORF1ab/nsp12879D879YGatTat9494AY.1190.003319
ORF1ab/nsp12879D879YGatTat8989AY.250.000535
ORF1ab/nsp12879D879YGatTat8484AY.190.095781
ORF1ab/nsp12879D879NGatAat7474AY.390.001829
ORF1ab/nsp12879D879YGatTat7474AY.440.00045
ORF1ab/nsp12879D879delGAT---6666All0.000013
ORF1ab/nsp12879D879YGatTat6363AY.30.000627
ORF1ab/nsp12879D879YGatTat6060AY.1200.002231
ORF1ab/nsp12879D879GgAtgGt6060AY.430.000266
ORF1ab/nsp12879D879YGatTat5757AY.4.50.006127
ORF1ab/nsp12879D879YGatTat5555AY.1020.001458
ORF1ab/nsp12879D879YGatTat5050B.1.1.5190.001986
ORF1ab/nsp12879D879AgAtgCt4949All0.000009
ORF1ab/nsp12879D879YGatTat4949B.1.6210.004337
ORF1ab/nsp12879D879YGatTat4747AY.390.001161
ORF1ab/nsp12879D879GgAtgGt4747B.1.177.40.00992
ORF1ab/nsp12879D879YGatTat4444B.1.20.000387
ORF1ab/nsp12879D879YGatTat4343B.1.1590.52439
ORF1ab/nsp12879D879DgaTgaC4242B.1.4290.000988
ORF1ab/nsp12879D879DgaTgaC3636B.1.1.70.000032
ORF1ab/nsp12879D879DgaTgaC3535B.1.2430.002435
ORF1ab/nsp12879D879delGAT---3333B.1.1.70.00003
ORF1ab/nsp12879D879YGatTat3232B.10.000293
ORF1ab/nsp12879D879GgAtgGt2828B.1.617.20.000105
ORF1ab/nsp12879D879YGatTat2525B.1.36.80.025
ORF1ab/nsp12879D879YGatTat2424AY.1080.026461
ORF1ab/nsp12879D879GgAtgGt2424AY.1190.000847
ORF1ab/nsp12879D879YGatTat2424AY.420.000966
ORF1ab/nsp12879D879YGatTat2424B.1.10.000435
ORF1ab/nsp12879D879GgAtgGt2323B.1.1.5190.000913
ORF1ab/nsp12879D879YGatTat2222AY.1170.001859
ORF1ab/nsp12879D879YGatTat2222AY.200.000855
ORF1ab/nsp12879D879VgAtgTt2121All0.000004
ORF1ab/nsp12879D879GgAtgGt2020B.1.1.2140.001109
ORF1ab/nsp12879D879YGatTat2020B.1.177.350.013822
ORF1ab/nsp12879D879YGatTat1919AY.260.000538
ORF1ab/nsp12879D879YGatTat1919AY.360.002816
ORF1ab/nsp12879D879YGatTat1919AY.46.50.00377
ORF1ab/nsp12879D879YGatTat1818AY.330.001202
ORF1ab/nsp12879D879YGatTat1818AY.4.2.10.002682
ORF1ab/nsp12879D879NGatAat1818AY.420.000724
ORF1ab/nsp12879D879YGatTat1818AY.50.000372
ORF1ab/nsp12879D879YGatTat1818B.1.177.420.0161
ORF1ab/nsp12879D879YGatTat1818B.1.2580.001198
ORF1ab/nsp12879D879GgAtgGt1717B.1.1770.000224
ORF1ab/nsp12879D879VgAtgTt1717B.1.4360.01749
ORF1ab/nsp12879D879YGatTat1515AY.39.10.000594
ORF1ab/nsp12879D879GgAtgGt1515B.10.000137
ORF1ab/nsp12879D879YGatTat1515B.1.2210.001065
ORF1ab/nsp12879D879NGatAat1414B.1.1.70.000013
ORF1ab/nsp12879D879YGatTat1313AY.120.10.004173
ORF1ab/nsp12879D879YGatTat1313AY.140.001144
ORF1ab/nsp12879D879NGatAat1111AY.920.00316
ORF1ab/nsp12879D879AgAtgCt1111B.1.1.70.00001
ORF1ab/nsp12879D879GgAtgGt1111P.10.000173
ORF1ab/nsp12879D879GgAtgGt1010AT.10.051282
ORF1ab/nsp12879D879YGatTat1010B.1.5260.000235
ORF1ab/nsp12879D879HGatCat99All0.000002
ORF1ab/nsp12879D879YGatTat99AY.290.000142
ORF1ab/nsp12879D879NGatAat99AY.440.000055
ORF1ab/nsp12879D879YGatTat99AY.980.000711
ORF1ab/nsp12879D879YGatTat99B.1.160.140.019068
ORF1ab/nsp12879D879YGatTat99P.10.000142
ORF1ab/nsp12879D879DgaTgaC88AY.1180.000501
ORF1ab/nsp12879D879YGatTat88AY.1180.000501
ORF1ab/nsp12879D879DgaTgaC88AY.30.00008
ORF1ab/nsp12879D879NGatAat88AY.470.000249
ORF1ab/nsp12879D879DgaTgaC88B.10.000073
ORF1ab/nsp12879D879YGatTat77AY.470.000218
ORF1ab/nsp12879D879GgAtgGt77B.1.10.000127
ORF1ab/nsp12879D879GgAtgGt77B.1.20.000062
ORF1ab/nsp12879D879YGatTat77B.1.36.290.003621
ORF1ab/nsp12879D879YGatTat77B.1.4290.000165
ORF1ab/nsp12879D879YGatTat77B.1.4360.007202
ORF1ab/nsp12879D879DgaTgaC77B.1.617.20.000026
ORF1ab/nsp12879D879del1gaTga-56All0.000001
ORF1ab/nsp12879D879del1Gat-at16All0
ORF1ab/nsp12879D879AgAtgCt66AY.40.000009
ORF1ab/nsp12879D879GgAtgGt66AY.440.000037
ORF1ab/nsp12879D879YGatTat66AY.460.000624
ORF1ab/nsp12879D879NGatAat66AY.640.003571
ORF1ab/nsp12879D879DgaTgaC66AY.680.001642
ORF1ab/nsp12879D879YGatTat66B.1.1600.000187
ORF1ab/nsp12879D879YGatTat66B.1.2400.001293
ORF1ab/nsp12879D879NGatAat66B.1.6250.014118
ORF1ab/nsp12879D879DgaTgaC66C.370.000696
ORF1ab/nsp12879D879YGatTat66C.370.000696
ORF1ab/nsp12879D879YGatTat55A.210.01385
ORF1ab/nsp12879D879EgaTgaA45All0.000001
ORF1ab/nsp12879D879EgaTgaG15All0
ORF1ab/nsp12879D879YGatTat55AY.1000.00023
ORF1ab/nsp12879D879DgaTgaC55AY.240.002155
ORF1ab/nsp12879D879GgAtgGt55AY.250.00003
ORF1ab/nsp12879D879GgAtgGt55AY.290.000079
ORF1ab/nsp12879D879DgaTgaC55AY.3.10.000426
ORF1ab/nsp12879D879YGatTat55AY.4.40.002046
ORF1ab/nsp12879D879YGatTat55AY.450.000608
ORF1ab/nsp12879D879YGatTat55AY.46.40.000823
ORF1ab/nsp12879D879YGatTat55AY.46.60.000361
ORF1ab/nsp12879D879YGatTat55AY.510.004545
ORF1ab/nsp12879D879YGatTat55AY.9.20.000184
ORF1ab/nsp12879D879YGatTat55B.1.1.2980.00431
ORF1ab/nsp12879D879YGatTat55B.1.6370.000365
ORF1ab/nsp12879D879GgAtgGt55C.370.00058
ORF1ab/nsp12879D879GgAtgGt44AY.1030.000025
ORF1ab/nsp12879D879YGatTat44AY.1100.000451
ORF1ab/nsp12879D879GgAtgGt44AY.200.000155
ORF1ab/nsp12879D879GgAtgGt44AY.330.000267
ORF1ab/nsp12879D879delGAT---44AY.40.000006
ORF1ab/nsp12879D879YGatTat44AY.4.20.000087
ORF1ab/nsp12879D879GgAtgGt44AY.420.000161
ORF1ab/nsp12879D879NGatAat44AY.450.000487
ORF1ab/nsp12879D879DgaTgaC44AY.9.20.000147
ORF1ab/nsp12879D879YGatTat44AY.98.10.000194
ORF1ab/nsp12879D879YGatTat44AY.99.20.000369
ORF1ab/nsp12879D879YGatTat44B.1.1.2140.000222
ORF1ab/nsp12879D879YGatTat44B.1.1.2610.034483
ORF1ab/nsp12879D879GgAtgGt44B.1.1.3050.015444
ORF1ab/nsp12879D879GgAtgGt44B.1.1.3170.001647
ORF1ab/nsp12879D879YGatTat44B.1.177.650.002661
ORF1ab/nsp12879D879DgaTgaC44B.1.3490.002859
ORF1ab/nsp12879D879YGatTat44B.1.466.20.001565
ORF1ab/nsp12879D879YGatTat44B.1.5610.001588
ORF1ab/nsp12879D879GgAtgGt44B.1.6090.001918
ORF1ab/nsp12879D879YGatTat44Q.30.00058
ORF1ab/nsp12879D879YGatTat33A.190.028302
ORF1ab/nsp12879D879YGatTat33AY.1110.000549
ORF1ab/nsp12879D879YGatTat33AY.1130.000427
ORF1ab/nsp12879D879YGatTat33AY.1160.00086
ORF1ab/nsp12879D879YGatTat33AY.230.000209
ORF1ab/nsp12879D879NGatAat33AY.250.000018
ORF1ab/nsp12879D879GgAtgGt33AY.260.000085
ORF1ab/nsp12879D879GgAtgGt33AY.30.00003
ORF1ab/nsp12879D879YGatTat33AY.39.1.10.002174
ORF1ab/nsp12879D879DgaTgaC33AY.4.20.000065
ORF1ab/nsp12879D879delGAT---33AY.4.50.000322
ORF1ab/nsp12879D879delGAT---33AY.430.000013
ORF1ab/nsp12879D879NGatAat33AY.540.000286
ORF1ab/nsp12879D879YGatTat33AY.60.000123
ORF1ab/nsp12879D879YGatTat33AY.750.000168
ORF1ab/nsp12879D879GgAtgGt33AY.9.20.00011
ORF1ab/nsp12879D879NGatAat33B.10.000027
ORF1ab/nsp12879D879YGatTat33B.1.1.2160.002671
ORF1ab/nsp12879D879YGatTat33B.1.1.280.000934
ORF1ab/nsp12879D879YGatTat33B.1.1.3480.002389
ORF1ab/nsp12879D879DgaTgaC33B.1.1260.003827
ORF1ab/nsp12879D879delGAT---33B.1.1770.00004
ORF1ab/nsp12879D879GgAtgGt33B.1.177.330.004934
ORF1ab/nsp12879D879DgaTgaC33B.1.177.350.002073
ORF1ab/nsp12879D879DgaTgaC33B.1.2210.000213
ORF1ab/nsp12879D879NGatAat33B.1.3190.009146
ORF1ab/nsp12879D879DgaTgaC33B.1.3510.000089
ORF1ab/nsp12879D879YGatTat33B.1.3690.000856
ORF1ab/nsp12879D879YGatTat33B.1.4620.021739
ORF1ab/nsp12879D879AgAtgCt33B.1.617.20.000011
ORF1ab/nsp12879D879GgAtgGt33P.1.150.000697
ORF1ab/nsp12879D879YGatTat22A0.000774
ORF1ab/nsp12879D879del2gATg--22All0
ORF1ab/nsp12879D879YGatTat22AY.1050.001286
ORF1ab/nsp12879D879AgAtgCt22AY.1200.000074
ORF1ab/nsp12879D879YGatTat22AY.130.000322
ORF1ab/nsp12879D879YGatTat22AY.160.000759
ORF1ab/nsp12879D879del1gaTga-22AY.250.000012
ORF1ab/nsp12879D879YGatTat22AY.270.000129
ORF1ab/nsp12879D879YGatTat22AY.29.10.000441
ORF1ab/nsp12879D879YGatTat22AY.3.10.000171
ORF1ab/nsp12879D879YGatTat22AY.340.000194
ORF1ab/nsp12879D879AgAtgCt22AY.4.50.000215
ORF1ab/nsp12879D879del1gaTga-22AY.430.000009
ORF1ab/nsp12879D879AgAtgCt22AY.430.000009
ORF1ab/nsp12879D879AgAtgCt22AY.440.000012
ORF1ab/nsp12879D879GgAtgGt22AY.450.000243
ORF1ab/nsp12879D879NGatAat22AY.460.000208
ORF1ab/nsp12879D879HGatCat22AY.50.000041
ORF1ab/nsp12879D879YGatTat22AY.610.00021
ORF1ab/nsp12879D879DgaTgaC22AY.670.000929
ORF1ab/nsp12879D879YGatTat22AY.700.000417
ORF1ab/nsp12879D879YGatTat22AY.710.00095
ORF1ab/nsp12879D879AgAtgCt22AY.75.10.000361
ORF1ab/nsp12879D879DgaTgaC22AY.770.002255
ORF1ab/nsp12879D879NGatAat22AY.840.000875
ORF1ab/nsp12879D879YGatTat22AY.880.001768
ORF1ab/nsp12879D879GgAtgGt22AY.9.10.000167
ORF1ab/nsp12879D879delGAT---22B.1.10.000036
ORF1ab/nsp12879D879YGatTat22B.1.1.10.000653
ORF1ab/nsp12879D879YGatTat22B.1.1.2220.000408
ORF1ab/nsp12879D879YGatTat22B.1.1.270.011299
ORF1ab/nsp12879D879YGatTat22B.1.1.2790.002242
ORF1ab/nsp12879D879VgAtgTt22B.1.1.70.000002
ORF1ab/nsp12879D879delGAT---22B.1.1.700.000682
ORF1ab/nsp12879D879GgAtgGt22B.1.1.700.000682
ORF1ab/nsp12879D879GgAtgGt22B.1.1600.000062
ORF1ab/nsp12879D879AgAtgCt22B.1.1770.000026
ORF1ab/nsp12879D879delGAT---22B.1.177.540.001213
ORF1ab/nsp12879D879YGatTat22B.1.177.570.000562
ORF1ab/nsp12879D879YGatTat22B.1.177.750.002081
ORF1ab/nsp12879D879DgaTgaC22B.1.177.750.002081
ORF1ab/nsp12879D879YGatTat22B.1.1790.007519
ORF1ab/nsp12879D879DgaTgaC22B.1.20.000018
ORF1ab/nsp12879D879GgAtgGt22B.1.258.170.000208
ORF1ab/nsp12879D879AgAtgCt22B.1.3510.000059
ORF1ab/nsp12879D879YGatTat22B.1.360.000292
ORF1ab/nsp12879D879YGatTat22B.1.36.180.00084
ORF1ab/nsp12879D879NGatAat22B.1.3810.015625
ORF1ab/nsp12879D879YGatTat22B.1.3960.001411
ORF1ab/nsp12879D879YGatTat22B.1.4090.001563
ORF1ab/nsp12879D879YGatTat22B.1.5650.001621
ORF1ab/nsp12879D879YGatTat22B.1.617.10.000258
ORF1ab/nsp12879D879delGAT---22B.1.617.20.000008
ORF1ab/nsp12879D879GgAtgGt22B.1.6380.105263
ORF1ab/nsp12879D879AgAtgCt22C.360.001821
ORF1ab/nsp12879D879HGatCat22D.20.00015
ORF1ab/nsp12879D879YGatTat22L.30.007092
ORF1ab/nsp12879D879DgaTgaC22P.10.000032
ORF1ab/nsp12879D879YGatTat22P.50.027397
ORF1ab/nsp12879D879YGatTat22Q.10.000253
ORF1ab/nsp12879D879YGatTat11A.2.5.10.004808
ORF1ab/nsp12879D879CGAtTGt11All0
ORF1ab/nsp12879D879TGAtACt11All0
ORF1ab/nsp12879D879DgaTgaC11AY.1010.00049
ORF1ab/nsp12879D879DgaTgaC11AY.1020.000027
ORF1ab/nsp12879D879GgAtgGt11AY.1020.000027
ORF1ab/nsp12879D879NGatAat11AY.1030.000006
ORF1ab/nsp12879D879AgAtgCt11AY.1030.000006
ORF1ab/nsp12879D879YGatTat11AY.1060.000335
ORF1ab/nsp12879D879YGatTat11AY.110.001339
ORF1ab/nsp12879D879NGatAat11AY.1100.000113
ORF1ab/nsp12879D879delGAT---11AY.1110.000183
ORF1ab/nsp12879D879DgaTgaC11AY.1170.000085
ORF1ab/nsp12879D879NGatAat11AY.1180.000063
ORF1ab/nsp12879D879GgAtgGt11AY.1180.000063
ORF1ab/nsp12879D879DgaTgaC11AY.1190.000035
ORF1ab/nsp12879D879YGatTat11AY.120.000316
ORF1ab/nsp12879D879DgaTgaC11AY.1200.000037
ORF1ab/nsp12879D879NGatAat11AY.1200.000037
ORF1ab/nsp12879D879YGatTat11AY.1210.000135
ORF1ab/nsp12879D879GgAtgGt11AY.140.000088
ORF1ab/nsp12879D879NGatAat11AY.140.000088
ORF1ab/nsp12879D879YGatTat11AY.150.002222
ORF1ab/nsp12879D879YGatTat11AY.16.10.00047
ORF1ab/nsp12879D879AgAtgCt11AY.200.000039
ORF1ab/nsp12879D879NGatAat11AY.230.00007
ORF1ab/nsp12879D879YGatTat11AY.240.000431
ORF1ab/nsp12879D879delGAT---11AY.250.000006
ORF1ab/nsp12879D879del2gATg--11AY.250.000006
ORF1ab/nsp12879D879EgaTgaA11AY.250.000006
ORF1ab/nsp12879D879DgaTgaC11AY.250.000006
ORF1ab/nsp12879D879AgAtgCt11AY.260.000028
ORF1ab/nsp12879D879YGatTat11AY.280.00189
ORF1ab/nsp12879D879del1gaTga-11AY.290.000016
ORF1ab/nsp12879D879HGatCat11AY.30.00001
ORF1ab/nsp12879D879NGatAat11AY.30.00001
ORF1ab/nsp12879D879YGatTat11AY.300.000396
ORF1ab/nsp12879D879GgAtgGt11AY.320.000532
ORF1ab/nsp12879D879YGatTat11AY.34.10.00051
ORF1ab/nsp12879D879YGatTat11AY.350.000233
ORF1ab/nsp12879D879YGatTat11AY.370.000316
ORF1ab/nsp12879D879GgAtgGt11AY.390.000025
ORF1ab/nsp12879D879CGAtTGt11AY.390.000025
ORF1ab/nsp12879D879GgAtgGt11AY.39.10.00004
ORF1ab/nsp12879D879YGatTat11AY.4.10.000737
ORF1ab/nsp12879D879NGatAat11AY.4.20.000022
ORF1ab/nsp12879D879NGatAat11AY.4.2.10.000149
ORF1ab/nsp12879D879YGatTat11AY.4.30.000842
ORF1ab/nsp12879D879DgaTgaC11AY.4.50.000107
ORF1ab/nsp12879D879YGatTat11AY.410.000294
ORF1ab/nsp12879D879NGatAat11AY.410.000294
ORF1ab/nsp12879D879AgAtgCt11AY.420.00004
ORF1ab/nsp12879D879DgaTgaC11AY.430.000004
ORF1ab/nsp12879D879HGatCat11AY.430.000004
ORF1ab/nsp12879D879EgaTgaA11AY.430.000004
ORF1ab/nsp12879D879DgaTgaC11AY.440.000006
ORF1ab/nsp12879D879GgAtgGt11AY.460.000104
ORF1ab/nsp12879D879YGatTat11AY.46.20.000635
ORF1ab/nsp12879D879AgAtgCt11AY.46.50.000198
ORF1ab/nsp12879D879NGatAat11AY.46.60.000072
ORF1ab/nsp12879D879GgAtgGt11AY.470.000031
ORF1ab/nsp12879D879DgaTgaC11AY.470.000031
ORF1ab/nsp12879D879DgaTgaC11AY.50.000021
ORF1ab/nsp12879D879NGatAat11AY.50.000021
ORF1ab/nsp12879D879AgAtgCt11AY.50.000021
ORF1ab/nsp12879D879EgaTgaA11AY.5.30.000337
ORF1ab/nsp12879D879NGatAat11AY.520.000814
ORF1ab/nsp12879D879YGatTat11AY.520.000814
ORF1ab/nsp12879D879DgaTgaC11AY.530.000288
ORF1ab/nsp12879D879YGatTat11AY.530.000288
ORF1ab/nsp12879D879DgaTgaC11AY.540.000095
ORF1ab/nsp12879D879YGatTat11AY.540.000095
ORF1ab/nsp12879D879YGatTat11AY.580.000907
ORF1ab/nsp12879D879NGatAat11AY.610.000105
ORF1ab/nsp12879D879GgAtgGt11AY.610.000105
ORF1ab/nsp12879D879YGatTat11AY.620.000436
ORF1ab/nsp12879D879YGatTat11AY.640.000595
ORF1ab/nsp12879D879YGatTat11AY.660.00107
ORF1ab/nsp12879D879YGatTat11AY.690.000187
ORF1ab/nsp12879D879NGatAat11AY.70.000196
ORF1ab/nsp12879D879NGatAat11AY.710.000475
ORF1ab/nsp12879D879YGatTat11AY.740.000116
ORF1ab/nsp12879D879NGatAat11AY.75.10.00018
ORF1ab/nsp12879D879YGatTat11AY.75.10.00018
ORF1ab/nsp12879D879YGatTat11AY.790.001211
ORF1ab/nsp12879D879GgAtgGt11AY.80.000606
ORF1ab/nsp12879D879YGatTat11AY.810.001992
ORF1ab/nsp12879D879YGatTat11AY.840.000437
ORF1ab/nsp12879D879YGatTat11AY.850.000427
ORF1ab/nsp12879D879YGatTat11AY.860.00083
ORF1ab/nsp12879D879NGatAat11AY.880.000884
ORF1ab/nsp12879D879delGAT---11AY.90.000068
ORF1ab/nsp12879D879GgAtgGt11AY.90.000068
ORF1ab/nsp12879D879YGatTat11AY.90.000068
ORF1ab/nsp12879D879YGatTat11AY.9.10.000084
ORF1ab/nsp12879D879DgaTgaC11AY.910.00073
ORF1ab/nsp12879D879YGatTat11AY.930.000273
ORF1ab/nsp12879D879YGatTat11AY.970.001701
ORF1ab/nsp12879D879YGatTat11AY.990.001049
ORF1ab/nsp12879D879delGAT---11AY.990.001049
ORF1ab/nsp12879D879YGatTat11AZ.30.00152
ORF1ab/nsp12879D879GgAtgGt11AZ.30.00152
ORF1ab/nsp12879D879YGatTat11B0.000128
ORF1ab/nsp12879D879VgAtgTt11B.10.000009
ORF1ab/nsp12879D879AgAtgCt11B.10.000009
ORF1ab/nsp12879D879delGAT---11B.10.000009
ORF1ab/nsp12879D879NGatAat11B.1.10.000018
ORF1ab/nsp12879D879EgaTgaA11B.1.10.000018
ORF1ab/nsp12879D879DgaTgaC11B.1.1.1210.002427
ORF1ab/nsp12879D879GgAtgGt11B.1.1.1610.003534
ORF1ab/nsp12879D879YGatTat11B.1.1.1890.001513
ORF1ab/nsp12879D879YGatTat11B.1.1.1960.005714
ORF1ab/nsp12879D879YGatTat11B.1.1.2190.005
ORF1ab/nsp12879D879YGatTat11B.1.1.2200.001859
ORF1ab/nsp12879D879delGAT---11B.1.1.2320.001815
ORF1ab/nsp12879D879GgAtgGt11B.1.1.2630.001558
ORF1ab/nsp12879D879delGAT---11B.1.1.3110.000358
ORF1ab/nsp12879D879YGatTat11B.1.1.3260.001761
ORF1ab/nsp12879D879YGatTat11B.1.1.330.000421
ORF1ab/nsp12879D879DgaTgaC11B.1.1.3480.000796
ORF1ab/nsp12879D879AgAtgCt11B.1.1.3690.000446
ORF1ab/nsp12879D879YGatTat11B.1.1.4090.002833
ORF1ab/nsp12879D879AgAtgCt11B.1.1.5190.00004
ORF1ab/nsp12879D879YGatTat11B.1.1.5230.001563
ORF1ab/nsp12879D879YGatTat11B.1.1.580.005376
ORF1ab/nsp12879D879HGatCat11B.1.1.70.000001
ORF1ab/nsp12879D879YGatTat11B.1.1030.019231
ORF1ab/nsp12879D879NGatAat11B.1.110.30.000718
ORF1ab/nsp12879D879YGatTat11B.1.1110.001175
ORF1ab/nsp12879D879GgAtgGt11B.1.1460.004237
ORF1ab/nsp12879D879GgAtgGt11B.1.160.140.002119
ORF1ab/nsp12879D879YGatTat11B.1.160.260.002421
ORF1ab/nsp12879D879YGatTat11B.1.177.120.000152
ORF1ab/nsp12879D879delGAT---11B.1.177.150.000631
ORF1ab/nsp12879D879YGatTat11B.1.177.320.00135
ORF1ab/nsp12879D879YGatTat11B.1.177.450.000381
ORF1ab/nsp12879D879YGatTat11B.1.177.560.000668
ORF1ab/nsp12879D879YGatTat11B.1.177.730.000566
ORF1ab/nsp12879D879YGatTat11B.1.177.80.000752
ORF1ab/nsp12879D879YGatTat11B.1.177.860.000183
ORF1ab/nsp12879D879NGatAat11B.1.20.000009
ORF1ab/nsp12879D879YGatTat11B.1.220.001318
ORF1ab/nsp12879D879NGatAat11B.1.2400.000216
ORF1ab/nsp12879D879VgAtgTt11B.1.2430.00007
ORF1ab/nsp12879D879delGAT---11B.1.258.100.011364
ORF1ab/nsp12879D879DgaTgaC11B.1.2600.003344
ORF1ab/nsp12879D879GgAtgGt11B.1.2650.001271
ORF1ab/nsp12879D879NGatAat11B.1.2980.002114
ORF1ab/nsp12879D879GgAtgGt11B.1.3510.00003
ORF1ab/nsp12879D879YGatTat11B.1.351.50.0006
ORF1ab/nsp12879D879YGatTat11B.1.36.10.00114
ORF1ab/nsp12879D879GgAtgGt11B.1.36.290.000517
ORF1ab/nsp12879D879YGatTat11B.1.3800.006623
ORF1ab/nsp12879D879DgaTgaC11B.1.3900.010638
ORF1ab/nsp12879D879AgAtgCt11B.1.4000.000429
ORF1ab/nsp12879D879YGatTat11B.1.4000.000429
ORF1ab/nsp12879D879HGatCat11B.1.4220.000812
ORF1ab/nsp12879D879GgAtgGt11B.1.4270.00005
ORF1ab/nsp12879D879GgAtgGt11B.1.4290.000024
ORF1ab/nsp12879D879GgAtgGt11B.1.4700.001404
ORF1ab/nsp12879D879YGatTat11B.1.5250.000113
ORF1ab/nsp12879D879DgaTgaC11B.1.5250.000113
ORF1ab/nsp12879D879GgAtgGt11B.1.5260.000024
ORF1ab/nsp12879D879NGatAat11B.1.5260.000024
ORF1ab/nsp12879D879YGatTat11B.1.5380.008065
ORF1ab/nsp12879D879YGatTat11B.1.5630.016949
ORF1ab/nsp12879D879GgAtgGt11B.1.5770.000687
ORF1ab/nsp12879D879YGatTat11B.1.5960.000087
ORF1ab/nsp12879D879YGatTat11B.1.6090.000479
ORF1ab/nsp12879D879TGAtACt11B.1.617.20.000004
ORF1ab/nsp12879D879NGatAat11B.1.6200.000946
ORF1ab/nsp12879D879EgaTgaG11B.1.6210.000089
ORF1ab/nsp12879D879AgAtgCt11B.1.6210.000089
ORF1ab/nsp12879D879GgAtgGt11B.1.6210.000089
ORF1ab/nsp12879D879DgaTgaC11B.1.6230.000536
ORF1ab/nsp12879D879YGatTat11B.1.6270.00202
ORF1ab/nsp12879D879GgAtgGt11B.1.6280.000352
ORF1ab/nsp12879D879delGAT---11B.1.6300.005236
ORF1ab/nsp12879D879YGatTat11B.1.6340.003425
ORF1ab/nsp12879D879YGatTat11B.1.80.001972
ORF1ab/nsp12879D879AgAtgCt11B.1.810.021277
ORF1ab/nsp12879D879YGatTat11B.280.003279
ORF1ab/nsp12879D879YGatTat11B.30.000831
ORF1ab/nsp12879D879del1Gat-at11B.310.003731
ORF1ab/nsp12879D879delGAT---11B.340.013699
ORF1ab/nsp12879D879YGatTat11B.60.00091
ORF1ab/nsp12879D879GgAtgGt11B.60.00091
ORF1ab/nsp12879D879NGatAat11B.6.60.000889
ORF1ab/nsp12879D879YGatTat11B.6.80.008264
ORF1ab/nsp12879D879delGAT---11C.170.055556
ORF1ab/nsp12879D879YGatTat11C.36.30.000567
ORF1ab/nsp12879D879AgAtgCt11N.30.005814
ORF1ab/nsp12879D879NGatAat11P.10.000016
ORF1ab/nsp12879D879GgAtgGt11P.1.170.000162
ORF1ab/nsp12879D879YGatTat11P.20.000187
ORF1ab/nsp12879D879del2gATg--11Q.20.000613
ORF1ab/nsp12879D879GgAtgGt11Q.20.000613
ORF1ab/nsp12879D879GgAtgGt11Q.80.000165
ORF1ab/nsp12879D879HGatCat11Q.80.000165
ORF1ab/nsp12879D879GgAtgGt11R.10.00009
ORF1ab/nsp12879D879YGatTat11V.10.022727