CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 85 & Codon = Tca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1285T85ST4477SnonsynAcaTca2072050.99033813693-13695

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1285T85SAcaTca205207All0.000039
ORF1ab/nsp1285T85SAcaTca4545B.1.1.70.00004
ORF1ab/nsp1285T85SAcaTca1818B.10.000165
ORF1ab/nsp1285T85SAcaTca1616B.1.5250.001811
ORF1ab/nsp1285T85SAcaTca1515B.1.1770.000198
ORF1ab/nsp1285T85SAcaTca1011B.1.20.000088
ORF1ab/nsp1285T85SAcaTca88A.10.002255
ORF1ab/nsp1285T85SAcaTca77B.1.10.000127
ORF1ab/nsp1285T85SAcaTca66B.1.1600.000187
ORF1ab/nsp1285T85SAcaTca66B.1.4290.000141
ORF1ab/nsp1285T85SAcaTca66L.30.021277
ORF1ab/nsp1285T85SAcaTca55B.1.3510.000149
ORF1ab/nsp1285T85SAcaTca55P.1.10.001588
ORF1ab/nsp1285T85SAcaTca44B.1.2580.000266
ORF1ab/nsp1285T85SAcaTca33B.1.1.4870.01676
ORF1ab/nsp1285T85SAcaTca23B.1.5260.000047
ORF1ab/nsp1285T85SAcaTca33P.10.000047
ORF1ab/nsp1285T85SAcaTca22AY.1030.000012
ORF1ab/nsp1285T85SAcaTca22AY.1080.002205
ORF1ab/nsp1285T85SAcaTca22AY.250.000012
ORF1ab/nsp1285T85SAcaTca22AY.290.000032
ORF1ab/nsp1285T85SAcaTca22AY.690.000373
ORF1ab/nsp1285T85SAcaTca22B.1.1.3180.000604
ORF1ab/nsp1285T85SAcaTca22B.1.1.5190.000079
ORF1ab/nsp1285T85SAcaTca22B.1.258.170.000208
ORF1ab/nsp1285T85SAcaTca22B.1.3330.021053
ORF1ab/nsp1285T85SAcaTca22B.1.4160.002538
ORF1ab/nsp1285T85SAcaTca11A0.000387
ORF1ab/nsp1285T85SAcaTca11A.23.10.000704
ORF1ab/nsp1285T85SAcaTca11AY.300.000396
ORF1ab/nsp1285T85SAcaTca11AY.39.10.00004
ORF1ab/nsp1285T85SAcaTca11AY.470.000031
ORF1ab/nsp1285T85SAcaTca11B0.000128
ORF1ab/nsp1285T85SAcaTca11B.1.1.100.001115
ORF1ab/nsp1285T85SAcaTca11B.1.1.280.000311
ORF1ab/nsp1285T85SAcaTca11B.1.1.500.000679
ORF1ab/nsp1285T85SAcaTca11B.1.110.30.000718
ORF1ab/nsp1285T85SAcaTca11B.1.1390.000733
ORF1ab/nsp1285T85SAcaTca11B.1.160.300.002976
ORF1ab/nsp1285T85SAcaTca11B.1.177.280.007407
ORF1ab/nsp1285T85SAcaTca11B.1.177.810.000189
ORF1ab/nsp1285T85SAcaTca11B.1.2430.00007
ORF1ab/nsp1285T85SAcaTca11B.1.258.140.00098
ORF1ab/nsp1285T85SAcaTca11B.1.3410.022727
ORF1ab/nsp1285T85SAcaTca11B.1.351.30.000876
ORF1ab/nsp1285T85SAcaTca11B.1.360.000146
ORF1ab/nsp1285T85SAcaTca11B.1.3710.001122
ORF1ab/nsp1285T85SAcaTca11B.1.4460.02
ORF1ab/nsp1285T85SAcaTca11B.1.5040.03125
ORF1ab/nsp1285T85SAcaTca11B.1.5750.000303
ORF1ab/nsp1285T85SAcaTca11B.1.5960.000087
ORF1ab/nsp1285T85SAcaTca11C.36.3.10.002717
ORF1ab/nsp1285T85SAcaTca11P.1.170.000162