CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 848

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12848V848LV5240LnonsynGtaTta152415130.99278215982-15984
ORF1ab/nsp12848V848LV5240LnonsynGtaCta1524110.0072178515982-15984
ORF1ab/nsp12848V848IV5240InonsynGtaAta115611550.99913515982-15984
ORF1ab/nsp12848V848IV5240InonsynGtAAtT115610.00086505215982-15984
ORF1ab/nsp12848V848VV5240VsyngtAgtT9857160.72690415982-15984
ORF1ab/nsp12848V848VV5240VsyngtAgtG9852670.27106615982-15984
ORF1ab/nsp12848V848VV5240VsyngtAgtC98520.0020304615982-15984
ORF1ab/nsp12848V848delV5240deldelGTA---4040115982-15984
ORF1ab/nsp12848V848del1V5240del1delgtAgt-26250.96153815982-15984
ORF1ab/nsp12848V848del1V5240del1delGta-ta2610.038461515982-15984
ORF1ab/nsp12848V848EV5240EnonsyngTagAa55115982-15984
ORF1ab/nsp12848V848AV5240AnonsyngTagCa320.66666715982-15984
ORF1ab/nsp12848V848AV5240AnonsyngTAgCG310.33333315982-15984
ORF1ab/nsp12848V848GV5240GnonsyngTagGa22115982-15984
ORF1ab/nsp12848V848RV5240RnonsynGTaAGa11115982-15984
ORF1ab/nsp12848V848del2V5240del2delGTa--a11115982-15984
ORF1ab/nsp12848V848CV5240CnonsynGTATGT11115982-15984
ORF1ab/nsp12848V848SV5240SnonsynGTAAGT11115982-15984

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12848V848LGtaTta15131524All0.000289
ORF1ab/nsp12848V848LGtaCta111524All0.000002
ORF1ab/nsp12848V848IGtaAta11551156All0.000221
ORF1ab/nsp12848V848IGtAAtT11156All0
ORF1ab/nsp12848V848VgtAgtT716985All0.000137
ORF1ab/nsp12848V848VgtAgtG267985All0.000051
ORF1ab/nsp12848V848VgtAgtC2985All0
ORF1ab/nsp12848V848VgtAgtT625625B.1.1.1980.917768
ORF1ab/nsp12848V848IGtaAta481481AY.750.026947
ORF1ab/nsp12848V848LGtaTta167167AY.40.00026
ORF1ab/nsp12848V848IGtaAta163164B.1.1.70.000146
ORF1ab/nsp12848V848IGtAAtT1164B.1.1.70.000001
ORF1ab/nsp12848V848VgtAgtG149163B.1.1.70.000133
ORF1ab/nsp12848V848VgtAgtT14163B.1.1.70.000013
ORF1ab/nsp12848V848LGtaTta133133B.1.6090.063758
ORF1ab/nsp12848V848LGtaTta120120B.1.617.20.000452
ORF1ab/nsp12848V848LGtaTta105106B.1.1.70.000094
ORF1ab/nsp12848V848LGtaCta1106B.1.1.70.000001
ORF1ab/nsp12848V848IGtaAta9797AY.40.000151
ORF1ab/nsp12848V848LGtaTta8181B.1.5960.007058
ORF1ab/nsp12848V848LGtaTta7579B.10.000687
ORF1ab/nsp12848V848LGtaCta479B.10.000037
ORF1ab/nsp12848V848LGtaTta7676AY.430.000337
ORF1ab/nsp12848V848VgtAgtG6868AY.440.000414
ORF1ab/nsp12848V848LGtaTta5858B.1.6370.004238
ORF1ab/nsp12848V848LGtaTta5656B.1.5820.027478
ORF1ab/nsp12848V848LGtaTta5555AY.1030.000341
ORF1ab/nsp12848V848IGtaAta5050B.1.617.20.000188
ORF1ab/nsp12848V848LGtaTta4949B.1.1770.000645
ORF1ab/nsp12848V848VgtAgtT4949B.1.177.450.018681
ORF1ab/nsp12848V848LGtaTta4343AY.440.000262
ORF1ab/nsp12848V848delGTA---4040All0.000008
ORF1ab/nsp12848V848IGtaAta3434AY.4.50.003655
ORF1ab/nsp12848V848IGtaAta3030AY.30.000298
ORF1ab/nsp12848V848del1gtAgt-2526All0.000005
ORF1ab/nsp12848V848del1Gta-ta126All0
ORF1ab/nsp12848V848LGtaTta2525AY.250.00015
ORF1ab/nsp12848V848LGtaTta2323AY.1020.00061
ORF1ab/nsp12848V848IGtaAta2222AY.250.000132
ORF1ab/nsp12848V848IGtaAta2222AY.430.000097
ORF1ab/nsp12848V848LGtaTta1818AY.30.000179
ORF1ab/nsp12848V848IGtaAta1717AY.99.20.001567
ORF1ab/nsp12848V848IGtaAta1616B.10.000147
ORF1ab/nsp12848V848LGtaTta1616B.1.20.000141
ORF1ab/nsp12848V848LGtaTta1515AY.290.000237
ORF1ab/nsp12848V848IGtaAta1515AY.470.000467
ORF1ab/nsp12848V848LGtaTta1414AY.1190.000494
ORF1ab/nsp12848V848LGtaTta1214B.1.10.000218
ORF1ab/nsp12848V848LGtaCta214B.1.10.000036
ORF1ab/nsp12848V848IGtaAta1313AY.440.000079
ORF1ab/nsp12848V848LGtaTta1112AY.390.000272
ORF1ab/nsp12848V848LGtaCta112AY.390.000025
ORF1ab/nsp12848V848delGTA---1212B.1.1.70.000011
ORF1ab/nsp12848V848IGtaAta1212B.1.20.000106
ORF1ab/nsp12848V848LGtaTta1212B.1.3460.015727
ORF1ab/nsp12848V848IGtaAta1212B.1.5950.003132
ORF1ab/nsp12848V848LGtaTta1111AY.330.000735
ORF1ab/nsp12848V848VgtAgtT911B.10.000082
ORF1ab/nsp12848V848VgtAgtG211B.10.000018
ORF1ab/nsp12848V848LGtaTta1111P.10.000173
ORF1ab/nsp12848V848VgtAgtG610B.1.1770.000079
ORF1ab/nsp12848V848VgtAgtT410B.1.1770.000053
ORF1ab/nsp12848V848LGtaTta1010R.10.0009
ORF1ab/nsp12848V848IGtaAta99AY.290.000142
ORF1ab/nsp12848V848LGtaTta99B.1.110.30.006466
ORF1ab/nsp12848V848LGtaTta99B.1.3880.818182
ORF1ab/nsp12848V848LGtaTta88AY.200.000311
ORF1ab/nsp12848V848LGtaTta88AY.39.10.000317
ORF1ab/nsp12848V848IGtaAta88P.1.40.007812
ORF1ab/nsp12848V848IGtaAta77AY.200.000272
ORF1ab/nsp12848V848LGtaTta77B.1.1.3620.039326
ORF1ab/nsp12848V848LGtaTta77B.1.1.3690.003124
ORF1ab/nsp12848V848LGtaTta77B.1.2400.001509
ORF1ab/nsp12848V848IGtaAta77B.1.2430.000487
ORF1ab/nsp12848V848VgtAgtG77B.1.617.20.000026
ORF1ab/nsp12848V848LGtaTta66AY.320.003195
ORF1ab/nsp12848V848VgtAgtG66AY.40.000009
ORF1ab/nsp12848V848LGtaTta66AY.840.002625
ORF1ab/nsp12848V848IGtaAta66B.1.1.1630.045802
ORF1ab/nsp12848V848LGtaTta66B.1.1600.000187
ORF1ab/nsp12848V848IGtaAta66B.1.36.10.006842
ORF1ab/nsp12848V848IGtaAta66P.10.000095
ORF1ab/nsp12848V848VgtAgtG66P.10.000095
ORF1ab/nsp12848V848VgtAgtG55A.20.003309
ORF1ab/nsp12848V848EgTagAa55All0.000001
ORF1ab/nsp12848V848IGtaAta55AY.1030.000031
ORF1ab/nsp12848V848IGtaAta55AY.1070.00233
ORF1ab/nsp12848V848LGtaTta55AY.1090.003698
ORF1ab/nsp12848V848LGtaTta55AY.1180.000313
ORF1ab/nsp12848V848IGtaAta55AY.330.000334
ORF1ab/nsp12848V848LGtaTta55AY.4.20.000108
ORF1ab/nsp12848V848IGtaAta55AY.420.000201
ORF1ab/nsp12848V848LGtaTta45AY.470.000124
ORF1ab/nsp12848V848LGtaCta15AY.470.000031
ORF1ab/nsp12848V848LGtaTta55AY.930.001365
ORF1ab/nsp12848V848del1gtAgt-55B.10.000046
ORF1ab/nsp12848V848VgtAgtT35B.1.10.000054
ORF1ab/nsp12848V848VgtAgtC15B.1.10.000018
ORF1ab/nsp12848V848VgtAgtG15B.1.10.000018
ORF1ab/nsp12848V848LGtaTta55B.1.1.3590.138889
ORF1ab/nsp12848V848LGtaTta55B.1.1.4310.080645
ORF1ab/nsp12848V848del1gtAgt-55B.1.20.000044
ORF1ab/nsp12848V848LGtaTta55B.1.4290.000118
ORF1ab/nsp12848V848LGtaTta55B.1.617.10.000645
ORF1ab/nsp12848V848IGtaAta55B.400.001821
ORF1ab/nsp12848V848LGtaTta44AY.140.000352
ORF1ab/nsp12848V848LGtaTta44AY.220.008368
ORF1ab/nsp12848V848LGtaTta44AY.230.000279
ORF1ab/nsp12848V848LGtaTta44AY.4.50.00043
ORF1ab/nsp12848V848LGtaTta44AY.490.01278
ORF1ab/nsp12848V848IGtaAta44AY.90.00027
ORF1ab/nsp12848V848IGtaAta44AY.900.002738
ORF1ab/nsp12848V848LGtaTta44B.1.1.3820.142857
ORF1ab/nsp12848V848LGtaTta44B.1.1.390.002039
ORF1ab/nsp12848V848LGtaTta44B.1.3510.000119
ORF1ab/nsp12848V848LGtaTta33AE.80.001467
ORF1ab/nsp12848V848AgTagCa23All0
ORF1ab/nsp12848V848AgTAgCG13All0
ORF1ab/nsp12848V848IGtaAta33AY.1020.00008
ORF1ab/nsp12848V848LGtaTta33AY.1170.000254
ORF1ab/nsp12848V848LGtaTta33AY.1200.000112
ORF1ab/nsp12848V848LGtaTta33AY.20.001068
ORF1ab/nsp12848V848IGtaAta33AY.270.000194
ORF1ab/nsp12848V848IGtaAta33AY.390.000074
ORF1ab/nsp12848V848LGtaTta33AY.420.000121
ORF1ab/nsp12848V848LGtaTta33AY.450.000365
ORF1ab/nsp12848V848IGtaAta33AY.50.000062
ORF1ab/nsp12848V848LGtaTta33AY.50.000062
ORF1ab/nsp12848V848LGtaTta33AY.520.002443
ORF1ab/nsp12848V848IGtaAta33AY.540.000286
ORF1ab/nsp12848V848LGtaTta33AY.60.000123
ORF1ab/nsp12848V848LGtaTta33AY.610.000314
ORF1ab/nsp12848V848LGtaTta33AY.90.000203
ORF1ab/nsp12848V848LGtaTta33AY.98.10.000145
ORF1ab/nsp12848V848LGtaTta33AY.99.20.000276
ORF1ab/nsp12848V848IGtaAta33B.1.10.000054
ORF1ab/nsp12848V848del1gtAgt-33B.1.10.000054
ORF1ab/nsp12848V848LGtaTta33B.1.1.250.001706
ORF1ab/nsp12848V848LGtaTta33B.1.1.3180.000905
ORF1ab/nsp12848V848LGtaTta33B.1.1.5190.000119
ORF1ab/nsp12848V848delGTA---33B.1.1.700.001023
ORF1ab/nsp12848V848IGtaAta33B.1.1770.00004
ORF1ab/nsp12848V848delGTA---33B.1.1770.00004
ORF1ab/nsp12848V848LGtaTta33B.1.177.70.000495
ORF1ab/nsp12848V848LGtaTta33B.1.2450.09375
ORF1ab/nsp12848V848LGtaTta33B.1.2580.0002
ORF1ab/nsp12848V848IGtaAta33B.1.3510.000089
ORF1ab/nsp12848V848IGtaAta33B.1.4740.005703
ORF1ab/nsp12848V848LGtaTta33B.1.5260.000071
ORF1ab/nsp12848V848LGtaTta33B.1.6280.001057
ORF1ab/nsp12848V848LGtaTta33N.50.0053
ORF1ab/nsp12848V848LGtaTta33W.40.004054
ORF1ab/nsp12848V848GgTagGa22All0
ORF1ab/nsp12848V848LGtaTta22AY.1000.000092
ORF1ab/nsp12848V848VgtAgtG22AY.1030.000012
ORF1ab/nsp12848V848LGtaTta12AY.1130.000142
ORF1ab/nsp12848V848LGtaCta12AY.1130.000142
ORF1ab/nsp12848V848IGtaAta22AY.1190.000071
ORF1ab/nsp12848V848IGtaAta22AY.140.000176
ORF1ab/nsp12848V848VgtAgtC12AY.250.000006
ORF1ab/nsp12848V848VgtAgtG12AY.250.000006
ORF1ab/nsp12848V848LGtaTta22AY.29.10.000441
ORF1ab/nsp12848V848IGtaAta22AY.39.10.000079
ORF1ab/nsp12848V848delGTA---22AY.40.000003
ORF1ab/nsp12848V848IGtaAta22AY.450.000243
ORF1ab/nsp12848V848VgtAgtG22AY.460.000208
ORF1ab/nsp12848V848LGtaTta22AY.5.30.000675
ORF1ab/nsp12848V848IGtaAta22AY.610.00021
ORF1ab/nsp12848V848LGtaTta22AY.710.00095
ORF1ab/nsp12848V848IGtaAta22AY.740.000231
ORF1ab/nsp12848V848LGtaTta22AY.750.000112
ORF1ab/nsp12848V848IGtaAta22AY.840.000875
ORF1ab/nsp12848V848EgTagAa22B0.000256
ORF1ab/nsp12848V848LGtaTta22B0.000256
ORF1ab/nsp12848V848LGtaTta22B.1.1.2070.002364
ORF1ab/nsp12848V848LGtaTta22B.1.1.2140.000111
ORF1ab/nsp12848V848IGtaAta22B.1.1.2220.000408
ORF1ab/nsp12848V848IGtaAta22B.1.1.2840.000215
ORF1ab/nsp12848V848LGtaTta22B.1.1.3060.000877
ORF1ab/nsp12848V848IGtaAta22B.1.1.5210.010695
ORF1ab/nsp12848V848LGtaTta22B.1.1.670.009132
ORF1ab/nsp12848V848del1gtAgt-22B.1.1.70.000002
ORF1ab/nsp12848V848delGTA---22B.1.177.540.001213
ORF1ab/nsp12848V848LGtaTta22B.1.1900.02
ORF1ab/nsp12848V848LGtaTta22B.1.2340.000264
ORF1ab/nsp12848V848IGtaAta22B.1.2360.004107
ORF1ab/nsp12848V848LGtaTta22B.1.360.000292
ORF1ab/nsp12848V848VgtAgtT22B.1.3620.003082
ORF1ab/nsp12848V848LGtaTta22B.1.3960.001411
ORF1ab/nsp12848V848LGtaTta22B.1.4270.000101
ORF1ab/nsp12848V848IGtaAta22B.1.4290.000047
ORF1ab/nsp12848V848LGtaTta22B.1.5060.047619
ORF1ab/nsp12848V848VgtAgtG12B.1.5260.000024
ORF1ab/nsp12848V848VgtAgtT12B.1.5260.000024
ORF1ab/nsp12848V848LGtaTta22B.1.5950.000522
ORF1ab/nsp12848V848delGTA---22B.1.617.20.000008
ORF1ab/nsp12848V848LGtaTta22B.400.000729
ORF1ab/nsp12848V848LGtaTta11A.10.000282
ORF1ab/nsp12848V848IGtaAta11A.10.000282
ORF1ab/nsp12848V848LGtaTta11A.2.50.000499
ORF1ab/nsp12848V848IGtaAta11A.2.50.000499
ORF1ab/nsp12848V848LGtaTta11A.270.001656
ORF1ab/nsp12848V848del1gtAgt-11AD.20.000219
ORF1ab/nsp12848V848RGTaAGa11All0
ORF1ab/nsp12848V848del2GTa--a11All0
ORF1ab/nsp12848V848SGTAAGT11All0
ORF1ab/nsp12848V848CGTATGT11All0
ORF1ab/nsp12848V848del1gtAgt-11AU.10.001266
ORF1ab/nsp12848V848LGtaTta11AY.10.000396
ORF1ab/nsp12848V848IGtaAta11AY.100.00053
ORF1ab/nsp12848V848IGtaAta11AY.1000.000046
ORF1ab/nsp12848V848LGtaTta11AY.1060.000335
ORF1ab/nsp12848V848VgtAgtG11AY.1080.001103
ORF1ab/nsp12848V848LGtaTta11AY.1100.000113
ORF1ab/nsp12848V848LGtaTta11AY.1110.000183
ORF1ab/nsp12848V848VgtAgtG11AY.1110.000183
ORF1ab/nsp12848V848IGtaAta11AY.1180.000063
ORF1ab/nsp12848V848LGtaTta11AY.120.000316
ORF1ab/nsp12848V848IGtaAta11AY.1200.000037
ORF1ab/nsp12848V848delGTA---11AY.1200.000037
ORF1ab/nsp12848V848IGtaAta11AY.120.10.000321
ORF1ab/nsp12848V848LGtaTta11AY.1210.000135
ORF1ab/nsp12848V848LGtaTta11AY.130.000161
ORF1ab/nsp12848V848LGtaTta11AY.16.10.00047
ORF1ab/nsp12848V848del1gtAgt-11AY.190.00114
ORF1ab/nsp12848V848LGtaTta11AY.240.000431
ORF1ab/nsp12848V848delGTA---11AY.250.000006
ORF1ab/nsp12848V848IGtaAta11AY.260.000028
ORF1ab/nsp12848V848LGtaTta11AY.280.00189
ORF1ab/nsp12848V848del1gtAgt-11AY.30.00001
ORF1ab/nsp12848V848IGtaAta11AY.3.10.000085
ORF1ab/nsp12848V848LGtaTta11AY.300.000396
ORF1ab/nsp12848V848IGtaAta11AY.340.000097
ORF1ab/nsp12848V848LGtaTta11AY.340.000097
ORF1ab/nsp12848V848IGtaAta11AY.360.000148
ORF1ab/nsp12848V848VgtAgtG11AY.360.000148
ORF1ab/nsp12848V848LGtaTta11AY.360.000148
ORF1ab/nsp12848V848IGtaAta11AY.370.000316
ORF1ab/nsp12848V848VgtAgtG11AY.390.000025
ORF1ab/nsp12848V848AgTagCa11AY.40.000002
ORF1ab/nsp12848V848IGtaAta11AY.4.20.000022
ORF1ab/nsp12848V848delGTA---11AY.4.50.000107
ORF1ab/nsp12848V848delGTA---11AY.430.000004
ORF1ab/nsp12848V848VgtAgtG11AY.430.000004
ORF1ab/nsp12848V848EgTagAa11AY.430.000004
ORF1ab/nsp12848V848del2GTa--a11AY.440.000006
ORF1ab/nsp12848V848delGTA---11AY.450.000122
ORF1ab/nsp12848V848LGtaTta11AY.460.000104
ORF1ab/nsp12848V848IGtaAta11AY.460.000104
ORF1ab/nsp12848V848IGtaAta11AY.5.30.000337
ORF1ab/nsp12848V848LGtaTta11AY.5.40.000277
ORF1ab/nsp12848V848LGtaTta11AY.510.000909
ORF1ab/nsp12848V848LGtaTta11AY.550.000917
ORF1ab/nsp12848V848IGtaAta11AY.560.001605
ORF1ab/nsp12848V848IGtaAta11AY.590.00053
ORF1ab/nsp12848V848IGtaAta11AY.650.000533
ORF1ab/nsp12848V848LGtaTta11AY.680.000274
ORF1ab/nsp12848V848IGtaAta11AY.70.000196
ORF1ab/nsp12848V848VgtAgtT11AY.7.10.000113
ORF1ab/nsp12848V848LGtaTta11AY.740.000116
ORF1ab/nsp12848V848LGtaTta11AY.770.001127
ORF1ab/nsp12848V848del1gtAgt-11AY.790.001211
ORF1ab/nsp12848V848del1gtAgt-11AY.820.001357
ORF1ab/nsp12848V848IGtaAta11AY.850.000427
ORF1ab/nsp12848V848LGtaTta11AY.850.000427
ORF1ab/nsp12848V848CGTATGT11AY.850.000427
ORF1ab/nsp12848V848LGtaTta11AY.9.10.000084
ORF1ab/nsp12848V848LGtaTta11AY.9.20.000037
ORF1ab/nsp12848V848IGtaAta11AY.9.20.000037
ORF1ab/nsp12848V848IGtaAta11AY.980.000079
ORF1ab/nsp12848V848VgtAgtG11AY.980.000079
ORF1ab/nsp12848V848IGtaAta11AZ.10.000867
ORF1ab/nsp12848V848delGTA---11B0.000128
ORF1ab/nsp12848V848delGTA---11B.1.10.000018
ORF1ab/nsp12848V848AgTAgCG11B.1.10.000018
ORF1ab/nsp12848V848LGtaTta11B.1.1.1630.007634
ORF1ab/nsp12848V848LGtaTta11B.1.1.1640.005155
ORF1ab/nsp12848V848LGtaTta11B.1.1.1700.001247
ORF1ab/nsp12848V848IGtaAta11B.1.1.1920.002309
ORF1ab/nsp12848V848VgtAgtG11B.1.1.2140.000055
ORF1ab/nsp12848V848LGtaTta11B.1.1.2220.000204
ORF1ab/nsp12848V848LGtaTta11B.1.1.2370.005405
ORF1ab/nsp12848V848LGtaTta11B.1.1.2530.002506
ORF1ab/nsp12848V848LGtaTta11B.1.1.2680.014925
ORF1ab/nsp12848V848IGtaAta11B.1.1.2790.001121
ORF1ab/nsp12848V848IGtaAta11B.1.1.280.000311
ORF1ab/nsp12848V848delGTA---11B.1.1.280.000311
ORF1ab/nsp12848V848LGtaTta11B.1.1.2800.003086
ORF1ab/nsp12848V848LGtaTta11B.1.1.2940.001266
ORF1ab/nsp12848V848delGTA---11B.1.1.3110.000358
ORF1ab/nsp12848V848LGtaTta11B.1.1.3120.001912
ORF1ab/nsp12848V848del1gtAgt-11B.1.1.3150.008475
ORF1ab/nsp12848V848IGtaAta11B.1.1.3390.010526
ORF1ab/nsp12848V848LGtaTta11B.1.1.3890.006061
ORF1ab/nsp12848V848LGtaTta11B.1.1.3980.003226
ORF1ab/nsp12848V848LGtaTta11B.1.1.480.002874
ORF1ab/nsp12848V848VgtAgtT11B.1.1.5190.00004
ORF1ab/nsp12848V848IGtaAta11B.1.1.700.000341
ORF1ab/nsp12848V848LGtaTta11B.1.1.750.010638
ORF1ab/nsp12848V848LGtaTta11B.1.1.80.003584
ORF1ab/nsp12848V848VgtAgtT11B.1.1600.000031
ORF1ab/nsp12848V848RGTaAGa11B.1.1770.000013
ORF1ab/nsp12848V848GgTagGa11B.1.1770.000013
ORF1ab/nsp12848V848LGtaTta11B.1.177.190.001431
ORF1ab/nsp12848V848delGTA---11B.1.177.210.000076
ORF1ab/nsp12848V848delGTA---11B.1.177.40.000211
ORF1ab/nsp12848V848delGTA---11B.1.177.510.004566
ORF1ab/nsp12848V848delGTA---11B.1.177.560.000668
ORF1ab/nsp12848V848LGtaTta11B.1.177.600.000218
ORF1ab/nsp12848V848delGTA---11B.1.177.690.001484
ORF1ab/nsp12848V848del1gtAgt-11B.1.177.730.000566
ORF1ab/nsp12848V848delGTA---11B.1.177.830.001481
ORF1ab/nsp12848V848IGtaAta11B.1.1950.005025
ORF1ab/nsp12848V848VgtAgtG11B.1.20.000009
ORF1ab/nsp12848V848EgTagAa11B.1.20.000009
ORF1ab/nsp12848V848LGtaTta11B.1.2210.000071
ORF1ab/nsp12848V848VgtAgtG11B.1.2210.000071
ORF1ab/nsp12848V848LGtaCta11B.1.2230.002778
ORF1ab/nsp12848V848LGtaTta11B.1.2410.000812
ORF1ab/nsp12848V848del1gtAgt-11B.1.2430.00007
ORF1ab/nsp12848V848LGtaTta11B.1.2430.00007
ORF1ab/nsp12848V848IGtaAta11B.1.2580.000067
ORF1ab/nsp12848V848LGtaTta11B.1.258.70.001912
ORF1ab/nsp12848V848IGtaAta11B.1.264.10.047619
ORF1ab/nsp12848V848LGtaTta11B.1.3110.000275
ORF1ab/nsp12848V848LGtaTta11B.1.3320.003497
ORF1ab/nsp12848V848LGtaTta11B.1.3490.000715
ORF1ab/nsp12848V848VgtAgtT11B.1.360.000146
ORF1ab/nsp12848V848LGtaTta11B.1.36.160.001425
ORF1ab/nsp12848V848LGtaTta11B.1.36.170.000494
ORF1ab/nsp12848V848LGtaTta11B.1.36.290.000517
ORF1ab/nsp12848V848del1Gta-ta11B.1.36.80.001
ORF1ab/nsp12848V848GgTagGa11B.1.3620.001541
ORF1ab/nsp12848V848VgtAgtT11B.1.4000.000429
ORF1ab/nsp12848V848LGtaTta11B.1.4040.001302
ORF1ab/nsp12848V848LGtaTta11B.1.4360.001029
ORF1ab/nsp12848V848LGtaTta11B.1.4650.003802
ORF1ab/nsp12848V848LGtaTta11B.1.466.20.000391
ORF1ab/nsp12848V848IGtaAta11B.1.4700.001404
ORF1ab/nsp12848V848LGtaTta11B.1.4970.000315
ORF1ab/nsp12848V848VgtAgtG11B.1.5250.000113
ORF1ab/nsp12848V848IGtaAta11B.1.5320.006211
ORF1ab/nsp12848V848VgtAgtT11B.1.5400.009709
ORF1ab/nsp12848V848LGtaTta11B.1.5400.009709
ORF1ab/nsp12848V848EgTagAa11B.1.5820.000491
ORF1ab/nsp12848V848IGtaAta11B.1.595.40.007299
ORF1ab/nsp12848V848IGtaAta11B.1.5960.000087
ORF1ab/nsp12848V848del1gtAgt-11B.1.5960.000087
ORF1ab/nsp12848V848VgtAgtT11B.1.5970.00463
ORF1ab/nsp12848V848LGtaTta11B.1.6120.002653
ORF1ab/nsp12848V848AgTagCa11B.1.617.10.000129
ORF1ab/nsp12848V848IGtaAta11B.1.6280.000352
ORF1ab/nsp12848V848delGTA---11B.550.00295
ORF1ab/nsp12848V848LGtaTta11C.180.002591
ORF1ab/nsp12848V848IGtaAta11C.370.000116
ORF1ab/nsp12848V848VgtAgtT11D.20.000075
ORF1ab/nsp12848V848VgtAgtG11D.30.005917
ORF1ab/nsp12848V848SGTAAGT11P.10.000016
ORF1ab/nsp12848V848IGtaAta11P.1.140.000048
ORF1ab/nsp12848V848VgtAgtT11P.20.000187
ORF1ab/nsp12848V848LGtaTta11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.