CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 846 & Codon = gaC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12846D846DD5238DsyngaTgaC18611861115976-15978

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12846D846DgaTgaC18611861All0.000356
ORF1ab/nsp12846D846DgaTgaC947947B.1.1600.029535
ORF1ab/nsp12846D846DgaTgaC156156AY.40.000243
ORF1ab/nsp12846D846DgaTgaC8080B.1.5960.006971
ORF1ab/nsp12846D846DgaTgaC7474B.1.1.70.000066
ORF1ab/nsp12846D846DgaTgaC6161B.1.617.20.00023
ORF1ab/nsp12846D846DgaTgaC5959AY.1030.000366
ORF1ab/nsp12846D846DgaTgaC5555B.1.10.000998
ORF1ab/nsp12846D846DgaTgaC4545B.1.20.000396
ORF1ab/nsp12846D846DgaTgaC2727AY.430.00012
ORF1ab/nsp12846D846DgaTgaC2626B.1.1770.000342
ORF1ab/nsp12846D846DgaTgaC2525AY.410.007349
ORF1ab/nsp12846D846DgaTgaC2323AY.260.000651
ORF1ab/nsp12846D846DgaTgaC2222AY.50.000454
ORF1ab/nsp12846D846DgaTgaC2222B.1.5260.000517
ORF1ab/nsp12846D846DgaTgaC1919AY.1000.000874
ORF1ab/nsp12846D846DgaTgaC1919B.10.000174
ORF1ab/nsp12846D846DgaTgaC1515AY.250.00009
ORF1ab/nsp12846D846DgaTgaC1515AY.30.000149
ORF1ab/nsp12846D846DgaTgaC1515AY.440.000091
ORF1ab/nsp12846D846DgaTgaC1414AY.4.20.000304
ORF1ab/nsp12846D846DgaTgaC1010B.1.1.5190.000397
ORF1ab/nsp12846D846DgaTgaC99AY.470.00028
ORF1ab/nsp12846D846DgaTgaC99P.10.000142
ORF1ab/nsp12846D846DgaTgaC88B.1.2580.000532
ORF1ab/nsp12846D846DgaTgaC77AY.390.000173
ORF1ab/nsp12846D846DgaTgaC77B.1.2400.001509
ORF1ab/nsp12846D846DgaTgaC55AY.350.001165
ORF1ab/nsp12846D846DgaTgaC55B.1.177.600.001092
ORF1ab/nsp12846D846DgaTgaC55B.1.36.290.002587
ORF1ab/nsp12846D846DgaTgaC44AY.230.000279
ORF1ab/nsp12846D846DgaTgaC44AY.340.000388
ORF1ab/nsp12846D846DgaTgaC44B.1.2430.000278
ORF1ab/nsp12846D846DgaTgaC33AY.850.001282
ORF1ab/nsp12846D846DgaTgaC33B.1.177.320.004049
ORF1ab/nsp12846D846DgaTgaC33B.1.3490.002144
ORF1ab/nsp12846D846DgaTgaC33R.10.00027
ORF1ab/nsp12846D846DgaTgaC22AY.1100.000225
ORF1ab/nsp12846D846DgaTgaC22AY.1170.000169
ORF1ab/nsp12846D846DgaTgaC22AY.1190.000071
ORF1ab/nsp12846D846DgaTgaC22AY.330.000134
ORF1ab/nsp12846D846DgaTgaC22B.1.1.3060.000877
ORF1ab/nsp12846D846DgaTgaC22B.1.160.290.008439
ORF1ab/nsp12846D846DgaTgaC22B.1.2310.064516
ORF1ab/nsp12846D846DgaTgaC22B.1.351.20.000605
ORF1ab/nsp12846D846DgaTgaC22D.20.00015
ORF1ab/nsp12846D846DgaTgaC22Q.10.000253
ORF1ab/nsp12846D846DgaTgaC11AY.1060.000335
ORF1ab/nsp12846D846DgaTgaC11AY.120.10.000321
ORF1ab/nsp12846D846DgaTgaC11AY.160.00038
ORF1ab/nsp12846D846DgaTgaC11AY.270.000065
ORF1ab/nsp12846D846DgaTgaC11AY.290.000016
ORF1ab/nsp12846D846DgaTgaC11AY.420.00004
ORF1ab/nsp12846D846DgaTgaC11AY.450.000122
ORF1ab/nsp12846D846DgaTgaC11AY.510.000909
ORF1ab/nsp12846D846DgaTgaC11AY.60.000041
ORF1ab/nsp12846D846DgaTgaC11AY.690.000187
ORF1ab/nsp12846D846DgaTgaC11AY.7.10.000113
ORF1ab/nsp12846D846DgaTgaC11AY.930.000273
ORF1ab/nsp12846D846DgaTgaC11AY.99.20.000092
ORF1ab/nsp12846D846DgaTgaC11B0.000128
ORF1ab/nsp12846D846DgaTgaC11B.1.1.2140.000055
ORF1ab/nsp12846D846DgaTgaC11B.1.1.2220.000204
ORF1ab/nsp12846D846DgaTgaC11B.1.1.3620.005618
ORF1ab/nsp12846D846DgaTgaC11B.1.1.700.000341
ORF1ab/nsp12846D846DgaTgaC11B.1.1.950.019608
ORF1ab/nsp12846D846DgaTgaC11B.1.160.150.00495
ORF1ab/nsp12846D846DgaTgaC11B.1.160.210.020408
ORF1ab/nsp12846D846DgaTgaC11B.1.177.860.000183
ORF1ab/nsp12846D846DgaTgaC11B.1.2340.000132
ORF1ab/nsp12846D846DgaTgaC11B.1.360.000146
ORF1ab/nsp12846D846DgaTgaC11B.1.3960.000706
ORF1ab/nsp12846D846DgaTgaC11B.1.4270.00005
ORF1ab/nsp12846D846DgaTgaC11B.1.4290.000024
ORF1ab/nsp12846D846DgaTgaC11B.1.5550.022222
ORF1ab/nsp12846D846DgaTgaC11B.1.6000.005848
ORF1ab/nsp12846D846DgaTgaC11B.1.6370.000073
ORF1ab/nsp12846D846DgaTgaC11C.370.000116
ORF1ab/nsp12846D846DgaTgaC11P.1.140.000048
ORF1ab/nsp12846D846DgaTgaC11Q.80.000165