CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 838

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12838L838IL5230InonsynCtaAta157138157138115952-15954
ORF1ab/nsp12838L838LL5230LsynCtaTta652664220.98406415952-15954
ORF1ab/nsp12838L838LL5230LsynctActG6526670.010266615952-15954
ORF1ab/nsp12838L838LL5230LsynctActT6526350.0053631615952-15954
ORF1ab/nsp12838L838LL5230LsynctActC652620.00030646615952-15954
ORF1ab/nsp12838L838ML5230MnonsynCtAAtG8383115952-15954
ORF1ab/nsp12838L838delL5230deldelCTA---4747115952-15954
ORF1ab/nsp12838L838VL5230VnonsynCtaGta1313115952-15954
ORF1ab/nsp12838L838PL5230PnonsyncTacCa760.85714315952-15954
ORF1ab/nsp12838L838PL5230PnonsyncTAcCT710.14285715952-15954
ORF1ab/nsp12838L838RL5230RnonsyncTacGa540.815952-15954
ORF1ab/nsp12838L838RL5230RnonsynCTaAGa510.215952-15954
ORF1ab/nsp12838L838del2L5230del2delCTAT--33115952-15954
ORF1ab/nsp12838L838TL5230TnonsynCTaACa320.66666715952-15954
ORF1ab/nsp12838L838TL5230TnonsynCTAACG310.33333315952-15954
ORF1ab/nsp12838L838del1L5230del1delctAct-11115952-15954
ORF1ab/nsp12838L838SL5230SnonsynCTaTCa11115952-15954
ORF1ab/nsp12838L838QL5230QnonsyncTacAa11115952-15954

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12838L838ICtaAta157138157138All0.030055
ORF1ab/nsp12838L838ICtaAta155794155794AY.430.69024
ORF1ab/nsp12838L838LCtaTta64226526All0.001228
ORF1ab/nsp12838L838LctActG676526All0.000013
ORF1ab/nsp12838L838LctActT356526All0.000007
ORF1ab/nsp12838L838LctActC26526All0
ORF1ab/nsp12838L838LCtaTta10051019B.1.1.70.0009
ORF1ab/nsp12838L838LctActG81019B.1.1.70.000007
ORF1ab/nsp12838L838LctActT51019B.1.1.70.000004
ORF1ab/nsp12838L838LctActC11019B.1.1.70.000001
ORF1ab/nsp12838L838LCtaTta676676B.1.4270.034136
ORF1ab/nsp12838L838ICtaAta596596AY.1060.199598
ORF1ab/nsp12838L838LCtaTta582583B.1.1770.007664
ORF1ab/nsp12838L838LctActT1583B.1.1770.000013
ORF1ab/nsp12838L838LCtaTta429431AY.430.001901
ORF1ab/nsp12838L838LctActG1431AY.430.000004
ORF1ab/nsp12838L838LctActT1431AY.430.000004
ORF1ab/nsp12838L838LCtaTta313313AY.750.017535
ORF1ab/nsp12838L838ICtaAta246246B.1.617.20.000926
ORF1ab/nsp12838L838LCtaTta197200AY.250.001185
ORF1ab/nsp12838L838LctActG3200AY.250.000018
ORF1ab/nsp12838L838LCtaTta177179B.1.617.20.000666
ORF1ab/nsp12838L838LctActG2179B.1.617.20.000008
ORF1ab/nsp12838L838LCtaTta166166AY.39.10.006576
ORF1ab/nsp12838L838LCtaTta156157AY.530.044853
ORF1ab/nsp12838L838LctActG1157AY.530.000288
ORF1ab/nsp12838L838LCtaTta116116AY.390.002867
ORF1ab/nsp12838L838LCtaTta112112B.1.1.5190.004448
ORF1ab/nsp12838L838LCtaTta106106B.1.1340.579235
ORF1ab/nsp12838L838LCtaTta102104AY.30.001015
ORF1ab/nsp12838L838LctActG2104AY.30.00002
ORF1ab/nsp12838L838LCtaTta102102AY.50.002106
ORF1ab/nsp12838L838LCtaTta100100B.1.5710.970874
ORF1ab/nsp12838L838LCtaTta9195B.10.000834
ORF1ab/nsp12838L838LctActG495B.10.000037
ORF1ab/nsp12838L838LCtaTta9191AY.1030.000565
ORF1ab/nsp12838L838LCtaTta8688AY.1200.003197
ORF1ab/nsp12838L838LctActC188AY.1200.000037
ORF1ab/nsp12838L838LctActG188AY.1200.000037
ORF1ab/nsp12838L838LCtaTta7287P.10.001134
ORF1ab/nsp12838L838LctActT1387P.10.000205
ORF1ab/nsp12838L838LctActG287P.10.000032
ORF1ab/nsp12838L838LCtaTta7884B.1.20.000687
ORF1ab/nsp12838L838LctActT584B.1.20.000044
ORF1ab/nsp12838L838LctActG184B.1.20.000009
ORF1ab/nsp12838L838MCtAAtG8383All0.000016
ORF1ab/nsp12838L838MCtAAtG8383AY.430.000368
ORF1ab/nsp12838L838ICtaAta8383AY.440.000505
ORF1ab/nsp12838L838ICtaAta8181AY.420.003259
ORF1ab/nsp12838L838LCtaTta7678AY.440.000463
ORF1ab/nsp12838L838LctActG278AY.440.000012
ORF1ab/nsp12838L838LCtaTta7577B.1.10.001361
ORF1ab/nsp12838L838LctActG277B.1.10.000036
ORF1ab/nsp12838L838LCtaTta6767AY.140.005897
ORF1ab/nsp12838L838LCtaTta6565B.1.3510.001932
ORF1ab/nsp12838L838LCtaTta6060B.1.177.210.004588
ORF1ab/nsp12838L838LCtaTta5757B.1.5820.027969
ORF1ab/nsp12838L838delCTA---4747All0.000009
ORF1ab/nsp12838L838LCtaTta4141B.1.5260.000964
ORF1ab/nsp12838L838LCtaTta3838B.1.258.170.003951
ORF1ab/nsp12838L838LCtaTta3737B.1.2210.002628
ORF1ab/nsp12838L838LCtaTta3737B.1.2430.002575
ORF1ab/nsp12838L838LCtaTta3737B.1.36.290.019141
ORF1ab/nsp12838L838ICtaAta3535AY.320.018637
ORF1ab/nsp12838L838LCtaTta3434B.1.5960.002963
ORF1ab/nsp12838L838LCtaTta3131AY.1130.004414
ORF1ab/nsp12838L838LCtaTta2231AY.40.000034
ORF1ab/nsp12838L838LctActG931AY.40.000014
ORF1ab/nsp12838L838LCtaTta2828AY.290.000442
ORF1ab/nsp12838L838LCtaTta2424N.50.042403
ORF1ab/nsp12838L838LCtaTta2323AY.1190.000812
ORF1ab/nsp12838L838LCtaTta2123AY.260.000595
ORF1ab/nsp12838L838LctActG223AY.260.000057
ORF1ab/nsp12838L838LCtaTta2323B.1.1600.000717
ORF1ab/nsp12838L838ICtaAta2121AY.1030.00013
ORF1ab/nsp12838L838LCtaTta2021B.1.2580.001331
ORF1ab/nsp12838L838LctActG121B.1.2580.000067
ORF1ab/nsp12838L838delCTA---2020B.1.1.70.000018
ORF1ab/nsp12838L838LCtaTta1919AY.470.000591
ORF1ab/nsp12838L838LCtaTta1919B.1.360.002772
ORF1ab/nsp12838L838LCtaTta1718AY.1020.000451
ORF1ab/nsp12838L838LctActT118AY.1020.000027
ORF1ab/nsp12838L838LCtaTta1818B.1.1.500.01222
ORF1ab/nsp12838L838LCtaTta1818Q.10.002274
ORF1ab/nsp12838L838LCtaTta1717AY.340.001648
ORF1ab/nsp12838L838ICtaAta1717AY.40.000026
ORF1ab/nsp12838L838ICtaAta1717B.10.000156
ORF1ab/nsp12838L838LCtaTta1616AY.200.000622
ORF1ab/nsp12838L838ICtaAta1616AY.98.10.000775
ORF1ab/nsp12838L838ICtaAta1515AY.1200.000558
ORF1ab/nsp12838L838ICtaAta1515AY.120.10.004815
ORF1ab/nsp12838L838LCtaTta1515AY.46.60.001083
ORF1ab/nsp12838L838LCtaTta1515B.1.4290.000353
ORF1ab/nsp12838L838LCtaTta1414B.1.466.20.005477
ORF1ab/nsp12838L838LCtaTta1414B.6.60.012444
ORF1ab/nsp12838L838LCtaTta1313A.2.50.006487
ORF1ab/nsp12838L838VCtaGta1313All0.000002
ORF1ab/nsp12838L838LCtaTta1313B.1.1.4040.206349
ORF1ab/nsp12838L838LCtaTta1212AY.75.10.002164
ORF1ab/nsp12838L838LCtaTta1212B.1.351.50.007194
ORF1ab/nsp12838L838LCtaTta1212B.1.5750.003641
ORF1ab/nsp12838L838LCtaTta1111AY.980.000869
ORF1ab/nsp12838L838LCtaTta1111B.1.177.810.002083
ORF1ab/nsp12838L838LCtaTta1111B.1.5770.00756
ORF1ab/nsp12838L838ICtaAta1010AY.340.00097
ORF1ab/nsp12838L838ICtaAta1010AY.390.000247
ORF1ab/nsp12838L838LCtaTta1010AY.450.001217
ORF1ab/nsp12838L838LCtaTta1010B.1.1.4200.01006
ORF1ab/nsp12838L838LCtaTta1010B.1.110.30.007184
ORF1ab/nsp12838L838LCtaTta1010B.1.177.70.001649
ORF1ab/nsp12838L838LCtaTta1010B.1.6280.003524
ORF1ab/nsp12838L838LCtaTta1010B.1.6290.133333
ORF1ab/nsp12838L838LCtaTta910C.370.001045
ORF1ab/nsp12838L838LctActG110C.370.000116
ORF1ab/nsp12838L838LCtaTta1010R.10.0009
ORF1ab/nsp12838L838ICtaAta99AY.370.002845
ORF1ab/nsp12838L838LCtaTta99AY.4.20.000195
ORF1ab/nsp12838L838LCtaTta99AY.610.000943
ORF1ab/nsp12838L838ICtaAta99AY.9.20.000331
ORF1ab/nsp12838L838LCtaTta69AY.98.10.000291
ORF1ab/nsp12838L838LctActG39AY.98.10.000145
ORF1ab/nsp12838L838LCtaTta88AM.40.028571
ORF1ab/nsp12838L838ICtaAta88AY.30.00008
ORF1ab/nsp12838L838LCtaTta88AY.330.000534
ORF1ab/nsp12838L838ICtaAta88AY.980.000632
ORF1ab/nsp12838L838LCtaTta88B.1.1.2850.052288
ORF1ab/nsp12838L838LCtaTta88B.1.5250.000905
ORF1ab/nsp12838L838LCtaTta88B.1.6060.048193
ORF1ab/nsp12838L838LCtaTta88Q.30.00116
ORF1ab/nsp12838L838LCtaTta77A.270.011589
ORF1ab/nsp12838L838PcTacCa67All0.000001
ORF1ab/nsp12838L838PcTAcCT17All0
ORF1ab/nsp12838L838ICtaAta77AY.39.10.000277
ORF1ab/nsp12838L838LCtaTta67AY.420.000241
ORF1ab/nsp12838L838LctActG17AY.420.00004
ORF1ab/nsp12838L838LCtaTta77AY.870.005828
ORF1ab/nsp12838L838ICtaAta77AY.90.000473
ORF1ab/nsp12838L838LCtaTta77B.1.3690.001997
ORF1ab/nsp12838L838LCtaTta56AY.1000.00023
ORF1ab/nsp12838L838LctActG16AY.1000.000046
ORF1ab/nsp12838L838ICtaAta66AY.300.002374
ORF1ab/nsp12838L838ICtaAta66AY.410.001764
ORF1ab/nsp12838L838LCtaTta66AY.460.000624
ORF1ab/nsp12838L838LCtaTta66AY.9.20.00022
ORF1ab/nsp12838L838LCtaTta66B.1.1.1170.058252
ORF1ab/nsp12838L838LCtaTta66B.1.1.2070.007092
ORF1ab/nsp12838L838LCtaTta66B.1.4160.007614
ORF1ab/nsp12838L838LCtaTta66B.1.438.10.000644
ORF1ab/nsp12838L838LCtaTta66P.1.140.000287
ORF1ab/nsp12838L838RcTacGa45All0.000001
ORF1ab/nsp12838L838RCTaAGa15All0
ORF1ab/nsp12838L838ICtaAta55AY.1080.005513
ORF1ab/nsp12838L838LCtaTta55AY.1100.000563
ORF1ab/nsp12838L838ICtaAta55AY.330.000334
ORF1ab/nsp12838L838VCtaGta55AY.430.000022
ORF1ab/nsp12838L838ICtaAta55AY.450.000608
ORF1ab/nsp12838L838ICtaAta55AY.460.00052
ORF1ab/nsp12838L838ICtaAta55AY.50.000103
ORF1ab/nsp12838L838ICtaAta55AY.5.40.001384
ORF1ab/nsp12838L838LCtaTta55AY.90.000338
ORF1ab/nsp12838L838LCtaTta55B.1.1.2840.000537
ORF1ab/nsp12838L838ICtaAta55B.1.1.70.000004
ORF1ab/nsp12838L838ICtaAta55B.1.20.000044
ORF1ab/nsp12838L838LCtaTta55B.1.5510.006452
ORF1ab/nsp12838L838LCtaTta55B.1.617.10.000645
ORF1ab/nsp12838L838LCtaTta35D.20.000225
ORF1ab/nsp12838L838LctActG15D.20.000075
ORF1ab/nsp12838L838LctActT15D.20.000075
ORF1ab/nsp12838L838ICtaAta55P.20.000933
ORF1ab/nsp12838L838LCtaTta55Q.80.000825
ORF1ab/nsp12838L838LCtaTta44AE.80.001956
ORF1ab/nsp12838L838ICtaAta44AY.1020.000106
ORF1ab/nsp12838L838LCtaTta44AY.1210.000541
ORF1ab/nsp12838L838LCtaTta44AY.160.001519
ORF1ab/nsp12838L838LCtaTta34AY.230.000209
ORF1ab/nsp12838L838LctActG14AY.230.00007
ORF1ab/nsp12838L838LCtaTta44AY.270.000259
ORF1ab/nsp12838L838ICtaAta44AY.34.10.00204
ORF1ab/nsp12838L838LCtaTta44AY.4.50.00043
ORF1ab/nsp12838L838delCTA---44AY.430.000018
ORF1ab/nsp12838L838ICtaAta44AY.46.60.000289
ORF1ab/nsp12838L838LCtaTta44AY.5.40.001107
ORF1ab/nsp12838L838LCtaTta44AY.510.003636
ORF1ab/nsp12838L838LCtaTta44AY.60.000165
ORF1ab/nsp12838L838LCtaTta34AY.99.20.000276
ORF1ab/nsp12838L838LctActG14AY.99.20.000092
ORF1ab/nsp12838L838LCtaTta44AZ.20.003284
ORF1ab/nsp12838L838ICtaAta44B0.000511
ORF1ab/nsp12838L838LCtaTta44B.1.1.2880.007663
ORF1ab/nsp12838L838LCtaTta44B.1.1.2910.00297
ORF1ab/nsp12838L838LCtaTta44B.1.1.3060.001754
ORF1ab/nsp12838L838VCtaGta44B.1.1.70.000004
ORF1ab/nsp12838L838LCtaTta44B.1.177.40.000844
ORF1ab/nsp12838L838LCtaTta44B.1.2400.000862
ORF1ab/nsp12838L838LCtaTta34B.1.6210.000266
ORF1ab/nsp12838L838LctActG14B.1.6210.000089
ORF1ab/nsp12838L838LctActG44B.6.40.181818
ORF1ab/nsp12838L838LCtaTta33A0.001161
ORF1ab/nsp12838L838LCtaTta33A.50.005769
ORF1ab/nsp12838L838del2CTAT--33All0.000001
ORF1ab/nsp12838L838TCTaACa23All0
ORF1ab/nsp12838L838TCTAACG13All0
ORF1ab/nsp12838L838LCtaTta33AY.100.00159
ORF1ab/nsp12838L838LCtaTta33AY.190.003421
ORF1ab/nsp12838L838ICtaAta33AY.230.000209
ORF1ab/nsp12838L838ICtaAta33AY.250.000018
ORF1ab/nsp12838L838LCtaTta33AY.360.000445
ORF1ab/nsp12838L838ICtaAta33AY.4.20.000065
ORF1ab/nsp12838L838LCtaTta33AY.540.000286
ORF1ab/nsp12838L838ICtaAta33AY.540.000286
ORF1ab/nsp12838L838LCtaTta33AY.620.001307
ORF1ab/nsp12838L838LCtaTta33AY.740.000347
ORF1ab/nsp12838L838LCtaTta33AY.850.001282
ORF1ab/nsp12838L838ICtaAta33AY.920.000862
ORF1ab/nsp12838L838LCtaTta33B.1.1.2140.000166
ORF1ab/nsp12838L838LCtaTta33B.1.1.2220.000612
ORF1ab/nsp12838L838LCtaTta33B.1.1.2770.002276
ORF1ab/nsp12838L838LCtaTta33B.1.1.280.000934
ORF1ab/nsp12838L838LCtaTta33B.1.1.3360.05
ORF1ab/nsp12838L838LctActT33B.1.1.3800.029412
ORF1ab/nsp12838L838RcTacGa23B.1.1.70.000002
ORF1ab/nsp12838L838RCTaAGa13B.1.1.70.000001
ORF1ab/nsp12838L838LCtaTta33B.1.1110.003525
ORF1ab/nsp12838L838LCtaTta33B.1.177.100.002634
ORF1ab/nsp12838L838LCtaTta33B.1.177.170.002463
ORF1ab/nsp12838L838LCtaTta23B.1.177.860.000367
ORF1ab/nsp12838L838LctActG13B.1.177.860.000183
ORF1ab/nsp12838L838LCtaTta33B.1.2340.000396
ORF1ab/nsp12838L838LCtaTta33B.1.3350.030928
ORF1ab/nsp12838L838LCtaTta33B.1.36.220.003623
ORF1ab/nsp12838L838LCtaTta33B.1.36.80.003
ORF1ab/nsp12838L838LctActG33B.1.621.10.001517
ORF1ab/nsp12838L838LCtaTta23B.1.6370.000146
ORF1ab/nsp12838L838LctActT13B.1.6370.000073
ORF1ab/nsp12838L838LCtaTta33L.10.005714
ORF1ab/nsp12838L838LCtaTta33P.1.120.001452
ORF1ab/nsp12838L838LCtaTta23P.20.000373
ORF1ab/nsp12838L838LctActG13P.20.000187
ORF1ab/nsp12838L838LCtaTta22AU.20.004843
ORF1ab/nsp12838L838LCtaTta22AY.1050.001286
ORF1ab/nsp12838L838LCtaTta22AY.1110.000366
ORF1ab/nsp12838L838ICtaAta22AY.1170.000169
ORF1ab/nsp12838L838LCtaTta22AY.1180.000125
ORF1ab/nsp12838L838ICtaAta22AY.1190.000071
ORF1ab/nsp12838L838LCtaTta22AY.120.10.000642
ORF1ab/nsp12838L838LCtaTta22AY.130.000322
ORF1ab/nsp12838L838LCtaTta22AY.300.000791
ORF1ab/nsp12838L838delCTA---22AY.4.50.000215
ORF1ab/nsp12838L838del2CTAT--22AY.440.000012
ORF1ab/nsp12838L838LCtaTta22AY.520.001629
ORF1ab/nsp12838L838LCtaTta22AY.570.001312
ORF1ab/nsp12838L838ICtaAta22AY.750.000112
ORF1ab/nsp12838L838ICtaAta22AY.950.001522
ORF1ab/nsp12838L838delCTA---22B.1.10.000036
ORF1ab/nsp12838L838LCtaTta22B.1.1.10.000653
ORF1ab/nsp12838L838LCtaTta22B.1.1.1330.016949
ORF1ab/nsp12838L838LCtaTta22B.1.1.1570.001826
ORF1ab/nsp12838L838LCtaTta22B.1.1.3120.003824
ORF1ab/nsp12838L838LCtaTta22B.1.1.3150.016949
ORF1ab/nsp12838L838LCtaTta22B.1.1.330.000842
ORF1ab/nsp12838L838LCtaTta22B.1.1.3480.001592
ORF1ab/nsp12838L838LCtaTta22B.1.1.370.000386
ORF1ab/nsp12838L838LCtaTta22B.1.1.3740.004751
ORF1ab/nsp12838L838LCtaTta22B.1.1.390.001019
ORF1ab/nsp12838L838LctActT22B.1.1.3970.004505
ORF1ab/nsp12838L838LCtaTta22B.1.1.3980.006452
ORF1ab/nsp12838L838LCtaTta22B.1.1.4660.017391
ORF1ab/nsp12838L838delCTA---22B.1.1.700.000682
ORF1ab/nsp12838L838LCtaTta22B.1.1080.011628
ORF1ab/nsp12838L838LCtaTta22B.1.160.150.009901
ORF1ab/nsp12838L838LCtaTta22B.1.1650.02381
ORF1ab/nsp12838L838delCTA---22B.1.1770.000026
ORF1ab/nsp12838L838LCtaTta22B.1.177.150.001262
ORF1ab/nsp12838L838delCTA---22B.1.177.540.001213
ORF1ab/nsp12838L838LCtaTta22B.1.177.570.000562
ORF1ab/nsp12838L838LCtaTta22B.1.22.10.0625
ORF1ab/nsp12838L838LCtaTta22B.1.2790.001027
ORF1ab/nsp12838L838LCtaTta22B.1.3490.00143
ORF1ab/nsp12838L838LCtaTta22B.1.36.10.002281
ORF1ab/nsp12838L838LCtaTta22B.1.6090.000959
ORF1ab/nsp12838L838LCtaTta22B.1.6120.005305
ORF1ab/nsp12838L838delCTA---22B.1.617.20.000008
ORF1ab/nsp12838L838LCtaTta22C.10.004785
ORF1ab/nsp12838L838LCtaTta22P.1.170.000324
ORF1ab/nsp12838L838LctActG12P.1.70.000319
ORF1ab/nsp12838L838LCtaTta12P.1.70.000319
ORF1ab/nsp12838L838LCtaTta110.055556
ORF1ab/nsp12838L838ICtaAta110.055556
ORF1ab/nsp12838L838ICtaAta11A.10.000282
ORF1ab/nsp12838L838LctActG11A.20.000662
ORF1ab/nsp12838L838LctActG11A.2.20.001689
ORF1ab/nsp12838L838LCtaTta11A.30.002096
ORF1ab/nsp12838L838LCtaTta11AA.50.016129
ORF1ab/nsp12838L838LCtaTta11AE.10.011364
ORF1ab/nsp12838L838del1ctAct-11All0
ORF1ab/nsp12838L838QcTacAa11All0
ORF1ab/nsp12838L838SCTaTCa11All0
ORF1ab/nsp12838L838ICtaAta11AW.10.003049
ORF1ab/nsp12838L838LCtaTta11AY.10.000396
ORF1ab/nsp12838L838ICtaAta11AY.100.00053
ORF1ab/nsp12838L838ICtaAta11AY.1000.000046
ORF1ab/nsp12838L838LCtaTta11AY.1010.00049
ORF1ab/nsp12838L838LCtaTta11AY.1060.000335
ORF1ab/nsp12838L838ICtaAta11AY.1070.000466
ORF1ab/nsp12838L838ICtaAta11AY.1100.000113
ORF1ab/nsp12838L838ICtaAta11AY.1110.000183
ORF1ab/nsp12838L838LCtaTta11AY.1140.000231
ORF1ab/nsp12838L838LCtaTta11AY.1160.000287
ORF1ab/nsp12838L838ICtaAta11AY.1160.000287
ORF1ab/nsp12838L838LCtaTta11AY.116.10.000311
ORF1ab/nsp12838L838delCTA---11AY.1200.000037
ORF1ab/nsp12838L838PcTAcCT11AY.120.10.000321
ORF1ab/nsp12838L838LCtaTta11AY.120.20.001285
ORF1ab/nsp12838L838ICtaAta11AY.1210.000135
ORF1ab/nsp12838L838ICtaAta11AY.140.000088
ORF1ab/nsp12838L838delCTA---11AY.190.00114
ORF1ab/nsp12838L838ICtaAta11AY.210.001898
ORF1ab/nsp12838L838LCtaTta11AY.240.000431
ORF1ab/nsp12838L838TCTaACa11AY.30.00001
ORF1ab/nsp12838L838ICtaAta11AY.360.000148
ORF1ab/nsp12838L838delCTA---11AY.40.000002
ORF1ab/nsp12838L838ICtaAta11AY.4.2.10.000149
ORF1ab/nsp12838L838ICtaAta11AY.4.30.000842
ORF1ab/nsp12838L838ICtaAta11AY.4.40.000409
ORF1ab/nsp12838L838del1ctAct-11AY.4.50.000107
ORF1ab/nsp12838L838LCtaTta11AY.400.000964
ORF1ab/nsp12838L838delCTA---11AY.440.000006
ORF1ab/nsp12838L838PcTacCa11AY.440.000006
ORF1ab/nsp12838L838LCtaTta11AY.46.30.000934
ORF1ab/nsp12838L838delCTA---11AY.50.000021
ORF1ab/nsp12838L838LCtaTta11AY.5.30.000337
ORF1ab/nsp12838L838LCtaTta11AY.500.000799
ORF1ab/nsp12838L838ICtaAta11AY.520.000814
ORF1ab/nsp12838L838ICtaAta11AY.530.000288
ORF1ab/nsp12838L838LCtaTta11AY.560.001605
ORF1ab/nsp12838L838LCtaTta11AY.580.000907
ORF1ab/nsp12838L838ICtaAta11AY.580.000907
ORF1ab/nsp12838L838LCtaTta11AY.590.00053
ORF1ab/nsp12838L838ICtaAta11AY.590.00053
ORF1ab/nsp12838L838LCtaTta11AY.600.000938
ORF1ab/nsp12838L838LCtaTta11AY.650.000533
ORF1ab/nsp12838L838LCtaTta11AY.680.000274
ORF1ab/nsp12838L838ICtaAta11AY.680.000274
ORF1ab/nsp12838L838LCtaTta11AY.690.000187
ORF1ab/nsp12838L838LCtaTta11AY.700.000209
ORF1ab/nsp12838L838ICtaAta11AY.700.000209
ORF1ab/nsp12838L838LCtaTta11AY.770.001127
ORF1ab/nsp12838L838delCTA---11AY.790.001211
ORF1ab/nsp12838L838LCtaTta11AY.9.10.000084
ORF1ab/nsp12838L838VCtaGta11AY.9.20.000037
ORF1ab/nsp12838L838ICtaAta11AY.910.00073
ORF1ab/nsp12838L838LCtaTta11AY.920.000287
ORF1ab/nsp12838L838ICtaAta11AY.930.000273
ORF1ab/nsp12838L838ICtaAta11AY.960.002075
ORF1ab/nsp12838L838ICtaAta11AY.99.20.000092
ORF1ab/nsp12838L838LctActT11B0.000128
ORF1ab/nsp12838L838PcTacCa11B0.000128
ORF1ab/nsp12838L838QcTacAa11B.10.000009
ORF1ab/nsp12838L838PcTacCa11B.10.000009
ORF1ab/nsp12838L838RcTacGa11B.1.10.000018
ORF1ab/nsp12838L838ICtaAta11B.1.10.000018
ORF1ab/nsp12838L838LCtaTta11B.1.1.120.007463
ORF1ab/nsp12838L838LCtaTta11B.1.1.1530.001095
ORF1ab/nsp12838L838LCtaTta11B.1.1.1710.003676
ORF1ab/nsp12838L838LctActG11B.1.1.1740.003378
ORF1ab/nsp12838L838LCtaTta11B.1.1.1960.005714
ORF1ab/nsp12838L838LCtaTta11B.1.1.2160.00089
ORF1ab/nsp12838L838LCtaTta11B.1.1.2200.001859
ORF1ab/nsp12838L838LCtaTta11B.1.1.2320.001815
ORF1ab/nsp12838L838LCtaTta11B.1.1.2410.00207
ORF1ab/nsp12838L838LCtaTta11B.1.1.2550.00303
ORF1ab/nsp12838L838LCtaTta11B.1.1.2650.003155
ORF1ab/nsp12838L838TCTAACG11B.1.1.280.000311
ORF1ab/nsp12838L838LCtaTta11B.1.1.2940.001266
ORF1ab/nsp12838L838LctActG11B.1.1.3020.002075
ORF1ab/nsp12838L838LCtaTta11B.1.1.3050.003861
ORF1ab/nsp12838L838delCTA---11B.1.1.3110.000358
ORF1ab/nsp12838L838LCtaTta11B.1.1.3180.000302
ORF1ab/nsp12838L838LCtaTta11B.1.1.3440.010753
ORF1ab/nsp12838L838LctActG11B.1.1.3720.000689
ORF1ab/nsp12838L838LCtaTta11B.1.1.3750.011905
ORF1ab/nsp12838L838LCtaTta11B.1.1.4160.000905
ORF1ab/nsp12838L838LCtaTta11B.1.1.4340.000349
ORF1ab/nsp12838L838LCtaTta11B.1.1.4860.001577
ORF1ab/nsp12838L838LCtaTta11B.1.1.5210.005348
ORF1ab/nsp12838L838LCtaTta11B.1.1.5280.004808
ORF1ab/nsp12838L838SCTaTCa11B.1.1.70.000001
ORF1ab/nsp12838L838PcTacCa11B.1.1.70.000001
ORF1ab/nsp12838L838LCtaTta11B.1.1.700.000341
ORF1ab/nsp12838L838LCtaTta11B.1.1180.006711
ORF1ab/nsp12838L838LCtaTta11B.1.1260.001276
ORF1ab/nsp12838L838PcTacCa11B.1.1770.000013
ORF1ab/nsp12838L838LCtaTta11B.1.177.200.001517
ORF1ab/nsp12838L838delCTA---11B.1.177.210.000076
ORF1ab/nsp12838L838LCtaTta11B.1.177.330.001645
ORF1ab/nsp12838L838ICtaAta11B.1.177.330.001645
ORF1ab/nsp12838L838delCTA---11B.1.177.40.000211
ORF1ab/nsp12838L838LCtaTta11B.1.177.400.005155
ORF1ab/nsp12838L838LCtaTta11B.1.177.540.000606
ORF1ab/nsp12838L838LCtaTta11B.1.177.560.000668
ORF1ab/nsp12838L838LCtaTta11B.1.177.60.000977
ORF1ab/nsp12838L838LCtaTta11B.1.177.650.000665
ORF1ab/nsp12838L838delCTA---11B.1.177.830.001481
ORF1ab/nsp12838L838LCtaTta11B.1.177.870.000728
ORF1ab/nsp12838L838PcTacCa11B.1.20.000009
ORF1ab/nsp12838L838TCTaACa11B.1.20.000009
ORF1ab/nsp12838L838VCtaGta11B.1.20.000009
ORF1ab/nsp12838L838del2CTAT--11B.1.20.000009
ORF1ab/nsp12838L838LCtaTta11B.1.2100.002132
ORF1ab/nsp12838L838LCtaTta11B.1.2140.003663
ORF1ab/nsp12838L838LCtaTta11B.1.214.20.0006
ORF1ab/nsp12838L838LCtaTta11B.1.2360.002053
ORF1ab/nsp12838L838LCtaTta11B.1.258.210.007752
ORF1ab/nsp12838L838LCtaTta11B.1.2800.007143
ORF1ab/nsp12838L838ICtaAta11B.1.3010.005917
ORF1ab/nsp12838L838LctActG11B.1.3110.000275
ORF1ab/nsp12838L838LCtaTta11B.1.3200.001245
ORF1ab/nsp12838L838LCtaTta11B.1.3500.002933
ORF1ab/nsp12838L838LCtaTta11B.1.36.170.000494
ORF1ab/nsp12838L838LCtaTta11B.1.36.250.002208
ORF1ab/nsp12838L838LCtaTta11B.1.36.380.001642
ORF1ab/nsp12838L838LCtaTta11B.1.3670.000792
ORF1ab/nsp12838L838ICtaAta11B.1.3750.00082
ORF1ab/nsp12838L838LCtaTta11B.1.3810.007812
ORF1ab/nsp12838L838LCtaTta11B.1.4020.009804
ORF1ab/nsp12838L838LCtaTta11B.1.4080.00369
ORF1ab/nsp12838L838LCtaTta11B.1.415.10.007576
ORF1ab/nsp12838L838LCtaTta11B.1.4180.015873
ORF1ab/nsp12838L838LCtaTta11B.1.4280.00102
ORF1ab/nsp12838L838LCtaTta11B.1.4360.001029
ORF1ab/nsp12838L838LCtaTta11B.1.466.10.007194
ORF1ab/nsp12838L838LCtaTta11B.1.4680.005714
ORF1ab/nsp12838L838LCtaTta11B.1.4990.00105
ORF1ab/nsp12838L838LCtaTta11B.1.499.10.111111
ORF1ab/nsp12838L838LCtaTta11B.1.5150.014493
ORF1ab/nsp12838L838LCtaTta11B.1.5170.000427
ORF1ab/nsp12838L838LCtaTta11B.1.5230.002451
ORF1ab/nsp12838L838VCtaGta11B.1.5250.000113
ORF1ab/nsp12838L838LCtaTta11B.1.5640.000426
ORF1ab/nsp12838L838LCtaTta11B.1.5760.000907
ORF1ab/nsp12838L838ICtaAta11B.1.5760.000907
ORF1ab/nsp12838L838LCtaTta11B.1.5890.007576
ORF1ab/nsp12838L838LCtaTta11B.1.5950.000261
ORF1ab/nsp12838L838LCtaTta11B.1.5990.00365
ORF1ab/nsp12838L838LCtaTta11B.1.6050.005952
ORF1ab/nsp12838L838ICtaAta11B.1.617.10.000129
ORF1ab/nsp12838L838LCtaTta11B.1.619.10.000641
ORF1ab/nsp12838L838ICtaAta11B.1.6270.00202
ORF1ab/nsp12838L838LCtaTta11B.1.6330.041667
ORF1ab/nsp12838L838LCtaTta11B.1.90.006173
ORF1ab/nsp12838L838delCTA---11B.340.013699
ORF1ab/nsp12838L838LCtaTta11B.390.002331
ORF1ab/nsp12838L838LCtaTta11B.40.002208
ORF1ab/nsp12838L838LctActT11B.4.40.018868
ORF1ab/nsp12838L838LCtaTta11B.460.020833
ORF1ab/nsp12838L838LCtaTta11B.60.00091
ORF1ab/nsp12838L838ICtaAta11B.6.30.026316
ORF1ab/nsp12838L838ICtaAta11B.6.60.000889
ORF1ab/nsp12838L838LCtaTta11C.360.000911
ORF1ab/nsp12838L838LCtaTta11C.36.30.000567
ORF1ab/nsp12838L838LCtaTta11C.36.3.10.002717
ORF1ab/nsp12838L838VCtaGta11D.20.000075
ORF1ab/nsp12838L838LCtaTta11L.30.003546
ORF1ab/nsp12838L838LCtaTta11N.40.004255
ORF1ab/nsp12838L838ICtaAta11P.10.000016
ORF1ab/nsp12838L838LCtaTta11P.1.150.000232
ORF1ab/nsp12838L838ICtaAta11P.1.17.10.000875
ORF1ab/nsp12838L838LCtaTta11P.1.40.000977
ORF1ab/nsp12838L838LCtaTta11P.30.001595
ORF1ab/nsp12838L838RcTacGa11Q.10.000126
ORF1ab/nsp12838L838ICtaAta11Q.30.000145