CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 814 | S814S | S5206S | syn | tcT | tcG | 14935 | 14727 | 0.986073 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814S | S5206S | syn | tcT | tcC | 14935 | 198 | 0.0132574 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814S | S5206S | syn | tcT | tcA | 14935 | 10 | 0.000669568 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814Y | S5206Y | nonsyn | tCt | tAt | 26 | 26 | 1 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814F | S5206F | nonsyn | tCt | tTt | 17 | 17 | 1 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814P | S5206P | nonsyn | Tct | Cct | 13 | 13 | 1 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814del | S5206del | del | TCT | --- | 6 | 6 | 1 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814A | S5206A | nonsyn | Tct | Gct | 6 | 6 | 1 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814del1 | S5206del1 | del | Tct | -ct | 3 | 2 | 0.666667 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814del1 | S5206del1 | del | tCt | t-t | 3 | 1 | 0.333333 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814T | S5206T | nonsyn | Tct | Act | 2 | 2 | 1 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814C | S5206C | nonsyn | tCt | tGt | 2 | 2 | 1 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814del2 | S5206del2 | del | tCT | t-- | 2 | 1 | 0.5 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814del2 | S5206del2 | del | TCt | --t | 2 | 1 | 0.5 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814R | S5206R | nonsyn | TCT | AGG | 1 | 1 | 1 | 15880-15882 |
ORF1ab/nsp12 | 814 | S814L | S5206L | nonsyn | TCt | CTt | 1 | 1 | 1 | 15880-15882 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 14727 | 14935 | All | 0.002817 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 198 | 14935 | All | 0.000038 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 10 | 14935 | All | 0.000002 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 8663 | 8663 | AY.7.1 | 0.976333 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 3819 | 3819 | AY.7 | 0.74853 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1630 | 1630 | AY.7.2 | 0.911633 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 158 | 190 | AY.103 | 0.000981 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 32 | 190 | AY.103 | 0.000199 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 133 | 133 | AY.42 | 0.005351 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 68 | 103 | B.1.617.2 | 0.000256 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 35 | 103 | B.1.617.2 | 0.000132 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 40 | 50 | AY.4 | 0.000062 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 9 | 50 | AY.4 | 0.000014 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 1 | 50 | AY.4 | 0.000002 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 37 | 37 | AY.6 | 0.001522 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 26 | 26 | All | 0.000005 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 13 | 22 | B.1.1.7 | 0.000012 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 9 | 22 | B.1.1.7 | 0.000008 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 11 | 18 | AY.43 | 0.000049 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 7 | 18 | AY.43 | 0.000031 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 17 | 17 | All | 0.000003 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 17 | 17 | AY.11 | 0.022758 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 16 | 16 | B.1.561 | 0.006352 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 13 | 13 | All | 0.000002 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 13 | 13 | B.1.2 | 0.000114 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 12 | 12 | AY.88 | 0.01061 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 12 | 12 | B.1.351 | 0.000357 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 10 | 11 | AY.5 | 0.000206 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 11 | AY.5 | 0.000021 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 10 | 10 | AY.113 | 0.001424 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 10 | 10 | B.1 | 0.000092 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 8 | 9 | AY.119 | 0.000282 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 9 | AY.119 | 0.000035 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 9 | 9 | AY.121 | 0.001218 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 5 | 9 | AY.75 | 0.00028 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 4 | 9 | AY.75 | 0.000224 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 7 | 8 | AY.84 | 0.003062 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 1 | 8 | AY.84 | 0.000437 |
ORF1ab/nsp12 | 814 | S814del | TCT | --- | 6 | 6 | All | 0.000001 |
ORF1ab/nsp12 | 814 | S814A | Tct | Gct | 6 | 6 | All | 0.000001 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 6 | 6 | AY.111 | 0.001099 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 6 | 6 | AY.20 | 0.000233 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 4 | 6 | AY.44 | 0.000024 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 6 | AY.44 | 0.000006 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 1 | 6 | AY.44 | 0.000006 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 5 | 6 | AY.45 | 0.000608 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 6 | AY.45 | 0.000122 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 3 | 5 | AY.100 | 0.000138 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 5 | AY.100 | 0.000092 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 4 | AY.117 | 0.000169 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 2 | 4 | AY.117 | 0.000169 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 4 | 4 | AY.4.3 | 0.003367 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 3 | 4 | AY.4.5 | 0.000322 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 4 | AY.4.5 | 0.000107 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 4 | 4 | AY.58 | 0.00363 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 3 | 4 | B.1 | 0.000027 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 4 | B.1 | 0.000009 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 4 | 4 | B.1.160 | 0.000125 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp12 | 814 | S814del1 | Tct | -ct | 2 | 3 | All | 0 |
ORF1ab/nsp12 | 814 | S814del1 | tCt | t-t | 1 | 3 | All | 0 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 3 | 3 | AY.106 | 0.001005 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 2 | 3 | AY.3 | 0.00002 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 3 | AY.3 | 0.00001 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 3 | AY.39 | 0.000049 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 3 | AY.39 | 0.000025 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 3 | 3 | AY.39.1.1 | 0.002174 |
ORF1ab/nsp12 | 814 | S814A | Tct | Gct | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 2 | 3 | B.1.1 | 0.000036 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 3 | B.1.1 | 0.000018 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 2 | 3 | B.1.177 | 0.000026 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 3 | B.1.177 | 0.000013 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 2 | 3 | B.1.525 | 0.000226 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 1 | 3 | B.1.525 | 0.000113 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 3 | B.1.621.1 | 0.001012 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 3 | B.1.621.1 | 0.000506 |
ORF1ab/nsp12 | 814 | S814T | Tct | Act | 2 | 2 | All | 0 |
ORF1ab/nsp12 | 814 | S814C | tCt | tGt | 2 | 2 | All | 0 |
ORF1ab/nsp12 | 814 | S814del2 | TCt | --t | 1 | 2 | All | 0 |
ORF1ab/nsp12 | 814 | S814del2 | tCT | t-- | 1 | 2 | All | 0 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 2 | AY.102 | 0.000027 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 2 | AY.102 | 0.000027 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 2 | AY.56 | 0.00321 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 2 | AY.64 | 0.00119 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 2 | 2 | AY.99.1 | 0.003106 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp12 | 814 | S814del | TCT | --- | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp12 | 814 | S814del | TCT | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp12 | 814 | S814del1 | tCt | t-t | 1 | 1 | A | 0.000387 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | A | 0.000387 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp12 | 814 | S814R | TCT | AGG | 1 | 1 | All | 0 |
ORF1ab/nsp12 | 814 | S814L | TCt | CTt | 1 | 1 | All | 0 |
ORF1ab/nsp12 | 814 | S814A | Tct | Gct | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp12 | 814 | S814A | Tct | Gct | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp12 | 814 | S814del | TCT | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | B | 0.000128 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 1 | 1 | B | 0.000128 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | B | 0.000128 |
ORF1ab/nsp12 | 814 | S814T | Tct | Act | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp12 | 814 | S814del2 | tCT | t-- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp12 | 814 | S814R | TCT | AGG | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp12 | 814 | S814C | tCt | tGt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp12 | 814 | S814C | tCt | tGt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp12 | 814 | S814A | Tct | Gct | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | B.1.177.45 | 0.000381 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcA | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp12 | 814 | S814del1 | Tct | -ct | 1 | 1 | B.1.177.69 | 0.001484 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp12 | 814 | S814del | TCT | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp12 | 814 | S814L | TCt | CTt | 1 | 1 | B.1.333 | 0.010526 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 1 | 1 | B.1.355 | 0.011111 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | B.1.36.27 | 0.000763 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcG | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp12 | 814 | S814T | Tct | Act | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp12 | 814 | S814Y | tCt | tAt | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp12 | 814 | S814del2 | TCt | --t | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp12 | 814 | S814P | Tct | Cct | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp12 | 814 | S814F | tCt | tTt | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp12 | 814 | S814del1 | Tct | -ct | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp12 | 814 | S814S | tcT | tcC | 1 | 1 | Q.4 | 0.000455 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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