CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 801 & Codon = Gct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12801T801AT5193AnonsynActGct1651630.98787915841-15843

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12801T801AActGct163165All0.000031
ORF1ab/nsp12801T801AActGct7272B.1.1.70.000064
ORF1ab/nsp12801T801AActGct1313B.1.4290.000306
ORF1ab/nsp12801T801AActGct1111B.1.1.2140.00061
ORF1ab/nsp12801T801AActGct1010AY.1000.00046
ORF1ab/nsp12801T801AActGct1010B.1.617.20.000038
ORF1ab/nsp12801T801AActGct88AY.290.000126
ORF1ab/nsp12801T801AActGct77AY.30.00007
ORF1ab/nsp12801T801AActGct55AY.40.000008
ORF1ab/nsp12801T801AActGct240.111111
ORF1ab/nsp12801T801AActGct44B.1.2220.006768
ORF1ab/nsp12801T801AActGct33AY.340.000291
ORF1ab/nsp12801T801AActGct33AY.440.000018
ORF1ab/nsp12801T801AActGct33B.1.360.000438
ORF1ab/nsp12801T801AActGct11AY.1020.000027
ORF1ab/nsp12801T801AActGct11AY.1180.000063
ORF1ab/nsp12801T801AActGct11AY.4.20.000022
ORF1ab/nsp12801T801AActGct11AY.420.00004
ORF1ab/nsp12801T801AActGct11AY.430.000004
ORF1ab/nsp12801T801AActGct11AY.46.40.000165
ORF1ab/nsp12801T801AActGct11AY.46.60.000072
ORF1ab/nsp12801T801AActGct11AY.7.10.000113
ORF1ab/nsp12801T801AActGct11AY.700.000209
ORF1ab/nsp12801T801AActGct11B.10.000009
ORF1ab/nsp12801T801AActGct11B.1.2060.000816
ORF1ab/nsp12801T801AActGct11B.1.6370.000073